BGIOSGA015540

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Revision as of 04:15, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015540| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015540, complete gene.| tag = OsI_149...")
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Gene Name

BGIOSGA015540

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015540, complete gene.

LocusTag

OsI_14959

Ensembl Transcript ID

BGIOSGA015540-TA

Ensembl Protein ID

BGIOSGA015540-PA

Length

2154

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5303013..5305166

Sequence Coding Region

5304155..5305166,5303792..5303851),complement(5303594..5303632,5303013..5303119

Genome Context

<gbrowseImage1> name=IndicaChromosome04:5303013..5305166 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:5303013..5305166 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGACCTTAATGATATCATGTATGATAATGAAAAACTTAGTTGTTCTCCTGTTAATAGCTCTAGAATTTCTCAATTTCCTCGTCATATTCATAATCTAGGGCTTATTGATCTTGGTTACAATGGCCCAGCATATACCTGGTCCAATAAAAAAAATGGTTGTGATTTAGTTCTTGAAAGACTTGATCGTTGTCTTGCTAATGTTGAATGGTGCATGCTTTTTCCTCATACTACTGTCTATCACTTACCTATGCTTTATAGTGATCATGCCCCCATCATAGCTATTCTCAATCCAATACACCATCATCCAAAGAAAAGTTTCAAATTTGAAAATTGGTGGATCTCTGAAAAAGATTTTCAAAAAGAAGCCCAAGCTGGCTGGTCAGCTATTAATTCTAATTTTCATTCTAAAGCTATTCATTTAGGAAAGCACCTTTCTACTTGGAATAAAAAAAAGGGTTCTTTGCATTCTCAGCTCAAACAGGTGGAAAATCAAATTCTACAGGTTCAAAGTAATGCTAACAGAGCTAATCTTCTCCATGAAGAAAAAAGGTTAGAGCAACTACATGATGCTCTTATGAGTAAGTTATCTGATTTTTACAAGCAAAGAGCAAAAAAATATTGGATACAACAGGGAGATAGAAACACCAGCTTCTTTCAACAGGCGGTTCATAAAAGAAGGAGAAAAAACAGGATTGCAGGGATAATGACACGTGATGGCTGGACTATCAATCCAGACAATATTGCTTTTACTTTTATTTCTTATTTCAATAATCTTTTCAGTTCTAATACTGCAGATTTAACTACAAACACCAATGAAGAAGCTGATCATAATAACCAGTTACCAGCCCCTACCCCTCCCACTGAAGACCAAATTTTAGCTCTACTCAAAGGAATGAAGAAGGATGCTTCCCCTGGTCCTGATGGTCTAAATGTAGGATTTTATATTGCAGCCTGGCCTTGGATAAAACAAGATGTCACAGAAATGGTTCATCAGTTTTATAATACAGCCTTTGATCGTCTTGAATGGTGTTTCATTGCTGAAGCTCTTCAACGTAAAGGCTTTCATGAATCCTTGTCTGAGGATATTCAATCAAATCACATCAAAGGCGCTTTTGGTGGACAGGAGGCTACAATGAACAACAAGTTAAAGGAATATGTTGGAGATCTTGGAATGACATTTGCAAACCTATTTCTCGAGGAGGTCTTGGTATAA</cdnaseq>

Protein Sequence

<aaseq>MGDLNDIMYDNEKLSCSPVNSSRISQFPRHIHNLGLIDLGYNGPAYTWSNKKNGCDLVLERLDRCLANVEWCMLFPHTTVYHLPMLYSDHAPIIAILNPIHHHPKKSFKFENWWISEKDFQKEAQAGWSAINSNFHSKAIHLGKHLSTWNKKKGSLHSQLKQVENQILQVQSNANRANLLHEEKRLEQLHDALMSKLSDFYKQRAKKYWIQQGDRNTSFFQQAVHKRRRKNRIAGIMTRDGWTINPDNIAFTFISYFNNLFSSNTADLTTNTNEEADHNNQLPAPTPPTEDQILALLKGMKKDASPGPDGLNVGFYIAAWPWIKQDVTEMVHQFYNTAFDRLEWCFIAEALQRKGFHESLSEDIQSNHIKGAFGGQEATMNNKLKEYVGDLGMTFANLFLEEVLV</aaseq>

Gene Sequence

<dnaseqindica>1..1012#1316..1375#1535..1573#2048..2154#ATGGGAGACCTTAATGATATCATGTATGATAATGAAAAACTTAGTTGTTCTCCTGTTAATAGCTCTAGAATTTCTCAATTTCCTCGTCATATTCATAATCTAGGGCTTATTGATCTTGGTTACAATGGCCCAGCATATACCTGGTCCAATAAAAAAAATGGTTGTGATTTAGTTCTTGAAAGACTTGATCGTTGTCTTGCTAATGTTGAATGGTGCATGCTTTTTCCTCATACTACTGTCTATCACTTACCTATGCTTTATAGTGATCATGCCCCCATCATAGCTATTCTCAATCCAATACACCATCATCCAAAGAAAAGTTTCAAATTTGAAAATTGGTGGATCTCTGAAAAAGATTTTCAAAAAGAAGCCCAAGCTGGCTGGTCAGCTATTAATTCTAATTTTCATTCTAAAGCTATTCATTTAGGAAAGCACCTTTCTACTTGGAATAAAAAAAAGGGTTCTTTGCATTCTCAGCTCAAACAGGTGGAAAATCAAATTCTACAGGTTCAAAGTAATGCTAACAGAGCTAATCTTCTCCATGAAGAAAAAAGGTTAGAGCAACTACATGATGCTCTTATGAGTAAGTTATCTGATTTTTACAAGCAAAGAGCAAAAAAATATTGGATACAACAGGGAGATAGAAACACCAGCTTCTTTCAACAGGCGGTTCATAAAAGAAGGAGAAAAAACAGGATTGCAGGGATAATGACACGTGATGGCTGGACTATCAATCCAGACAATATTGCTTTTACTTTTATTTCTTATTTCAATAATCTTTTCAGTTCTAATACTGCAGATTTAACTACAAACACCAATGAAGAAGCTGATCATAATAACCAGTTACCAGCCCCTACCCCTCCCACTGAAGACCAAATTTTAGCTCTACTCAAAGGAATGAAGAAGGATGCTTCCCCTGGTCCTGATGGTCTAAATGTAGGATTTTATATTGCAGCCTGGCCTTGGATAAAACAAGATGTCACAGAAATGGTTCATCAGTTTTATAATACAGGTAATTTCCAAACAGGTATGAATCATACTAATATCACTCTCATTCCAAAAACCAAAAACCCTACCTCTCCTGCAGATTTCAGACCCATTAGCTTATGCAATGTCTCTTATAAAATTATTTCCAAATCTTTAGCAGACCAAATTAAATTCCATCTTCCTGATCTTATCTCTGAAACTCAACAAGCTTTTATAAAAGGAAGAAGAATTTCAAATAACCTAGTTATTGCTCAAGAAATTGTCCATTCTTTTGGTCTAAACTCCTACAAAAACAACTCTTTCATGCTTAAACTTGATTTATCTAAAGCCTTTGATCGTCTTGAATGGTGTTTCATTGCTGAAGCTCTTCAACGTAAAGGCTTTCATGGTAATTTCATCAATCTTGTACTTTCTTGTATCAGTACAGCATCCTTTTTAGTTAACATTAATGGCCAATCATATGGTTGCTTTTCGGCGCAAAGAGGAATAAGACAAGGTTGTCCTTTATCTCTTTATTTATTTGTACTTGCAATTAATGAACTTTCAGAATCCTTGTCTGAGGATATTCAATCAAATCACATCAAAGGTATAGCTTTGACCCCTGGTGGCACTATCATTCATTCTCTTATGTATGCAGATGATCTAATCATTACTGGACAGGCAAATCAAGTTGAAGCTTCTCGAATCTTCCAAATTATTCAAAAGTTTTGTGAAGAGTCTGGTCAAACTCCAAACTGGGGAAAGTCTTCCATCTTCTTTAGTACTTCAACTCCTAGTCATATAAAAAATCAAATTATTAATATTTTCCAGTTCCCCTTATTGATAACTCAACTAAACATCTTGGTCATCCTTTAATTATAAACACCAGAGCTAGAGCTTCAGCTTACAATTTTATCATTTCTAAATTCAAAAGTCGTCTTACTCTTCTCAAAGCTAACATTCTTTCTCATGCAGGTCGGCTTTCACTAATCGAATATGTCTTTGTCTTCATTCCCATTTACTATATGGCCTCTATTTTGCATTCTAAATATCTTTTAAACAAAATAACTTCTATTATCAGGCGCTTTTGGTGGACAGGAGGCTACAATGAACAACAAGTTAAAGGAATATGTTGGAGATCTTGGAATGACATTTGCAAACCTATTTCTCGAGGAGGTCTTGGTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015540