BGIOSGA015542

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Revision as of 04:15, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015542| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015542, complete gene.| tag = OsI_149...")
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Gene Name

BGIOSGA015542

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015542, complete gene.

LocusTag

OsI_14954

Ensembl Transcript ID

BGIOSGA015542-TA

Ensembl Protein ID

BGIOSGA015542-PA

Length

3896

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5186147..5190042

Sequence Coding Region

5187654..5190042,5186147..5186169

Genome Context

<gbrowseImage1> name=IndicaChromosome04:5186147..5190042 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:5186147..5190042 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGTGTTGGGGAGGCAGCCATGCAAGATGGAGCAAGAATTAGGTTGGGAAGGTTTTCATCCAAGCAGCGCCCACCAACTGTTCGATGGAATGCCAAGCCAACCTGGGTTGTCCAAGGAAGATCAGAGGATATCTAAGCCCGTTCCCATCAATTCCACCATGAATATAGAGGAGAAATGGCTAGATGAAGCTTTGGATCGGATATTGGAGAAGTTTGAACAAATGGAGGCCAAGCGCCGGCAAGAGGACAAGCTCAATCAAATTTTTCAGAAGCTGGAGGAGATAGAGGCTTGTAGGAGCAAGGCTTCTGAGGAGACGATTGCTGCCATCAGGGCAACCACCGCCATCCTCAAGGCTGCATCATCTCCGATACCTATGGCACCACCTCCTCCAGTGCCCACCAACTGTTTGATGGAATGCCACAACAACAACATCACTTTGGTGGCAGTGAATTCAAGTCACATCGGCGAGGTACTTACCCCGATGGTTGCCTTCGAGCTTGGGGACGTTGAGGACAAGGATCCCGTCCCCTACATTGTCAACAAGGATTCCCGTGACAAGGATGACTCCCTGCTCAATCTCGACACATCCAACGTCATTCCAGTGATTGCAGCCTCCTCAACAAGCTTGCTTGTTCATGCCGAAACTGATTCCATGATGTTCGCTAAGTGTTTGAAGTTGGGTCTAAATGTCAACACTAGTACTGTCCAGACTGGGGTTGTGTTCCCACTCTTTCTTGACGAACTGGACATCATCACAGCACCAGGGGAGTCCATGCTAGTCATGGTGCAAAGGTTGGGTTCTGTTTTCTTCCTTAAAATGCTGGCGCATGACGGGTGTTCGATGAAATGTGCTAGAGATGACAAGTTGTTGATGGAGCCTTCCAAAAAGAATCCATGGCCACCCCCTTGGTTAGGTGGAGTAGTTAGAGTATGTGAGTTGAGGCATGCCCCATGGACAGAATTGAACTCTTGTTGGGCAACAGGGCATTTAATGCCACCATGGCCACCACCAATTCGACCATGGCCCCCATCACAACAAGCAAGTTTCAGATTTGTGCCTTTTCAAGCTAGAAACAGTGAGTGTGGCAACTCGGTTACTGCCTTGTCTACCATTGCTTGGAACAAGTGGAAAAAGATAAGGAGTACTGCTTGTGACTCTTGCTTTGAGCAGGAAATGAAAGAGTGTTGGGATTTTGATTTGGCTTTGCAGTTTCCATCCTCTCAATTTTTGGAAACATTTTTCAGCTGCTATCAAAATGGAAGAAAGGGAGCAACCTCACTACCACAGTCTGATGAATTCAAGCAAAATGGCATAAAAAATGAAAAGAAGTCAACACCATGGCTATATCCTAATTGCAGCTGTGATGGCATGTTGAACATATGCTCACAAATATTGCCTTGTCAAAGATGTTCTGCCATGTTCCTACGAAGGAGCCAAGTGGAGACATGTGCTATAAGAAACATTTGCATGACATTATCAGGAATCAAACTATGGCTAGCAGGTCACTTGGGTCTGAATGGTGAAGATGATTCGTTAAATGTGAACTGCAATTCCTCAGATGAGCTAAATTTTGGTATGAAAAGGGGTCCATCTAAAATGCATTTTACTGTGTTGGAAGTGCGAATATTTGGGGAGCTTGGTGCTGGTGAGGTTATCTTCTACATGCTTGGGTTAGACTGCAGGCAGAGATGTCATTCCTTTTGTTTGAGGTATAAGTGGTGGAGTATAAATCTTGTTATCAGCTTGGGACAACCTGATGTATACATTCAGGTTTACTTGCCTGCTCTCTGTTGTGCTCATTCCAGTAGCATGCTGAAATTTTTGGTTATTTCAAGTACTGGGTTGGAGCAGATCAGGGTTTCATGTGGCAAAGAATTGGAATTCTTGGTTGACTTGTACTCACCTTGCTATTCATCTATTCAAGTAAAGGAAAGAGAGAACCATTTCCTACAGTCAACTAAACATCAATTAAATTCCGGTGACAGTGGACAAAATACTGAGGAAAGTGAATATGAGCTCACTGTCAAGGTTTATCAGTACAGTCCTGGGGATGGTAGTGCTATAGAGAAATTGTTCATTGATGGGCTTTGTTCCAAGAAGAATTCAGAGTTATGTGCTTCAGCTAAGTATGCTAATTACTGGCTTGTAAGATGCCTGGAGGACACAGAAGATAAGTGCCCAATACACCGAATGTTACTAGTAGTGGTTGTTACATGGAAGGTTGATGCCTATGCAATTCTAAGAGGAGCTGCTATTAAGATAGAGCAACATTTGCCATGTGATATATTCCATACAAGACAGGCAAGTACAGAGCAAGTTATTAAGTCATATGTGAGCAACTCCAAGGAAATTCAAGAGCTACAAATGCCATGGGATCCCGGTGGATTTAGAATCGGTAACGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MEVLGRQPCKMEQELGWEGFHPSSAHQLFDGMPSQPGLSKEDQRISKPVPINSTMNIEEKWLDEALDRILEKFEQMEAKRRQEDKLNQIFQKLEEIEACRSKASEETIAAIRATTAILKAASSPIPMAPPPPVPTNCLMECHNNNITLVAVNSSHIGEVLTPMVAFELGDVEDKDPVPYIVNKDSRDKDDSLLNLDTSNVIPVIAASSTSLLVHAETDSMMFAKCLKLGLNVNTSTVQTGVVFPLFLDELDIITAPGESMLVMVQRLGSVFFLKMLAHDGCSMKCARDDKLLMEPSKKNPWPPPWLGGVVRVCELRHAPWTELNSCWATGHLMPPWPPPIRPWPPSQQASFRFVPFQARNSECGNSVTALSTIAWNKWKKIRSTACDSCFEQEMKECWDFDLALQFPSSQFLETFFSCYQNGRKGATSLPQSDEFKQNGIKNEKKSTPWLYPNCSCDGMLNICSQILPCQRCSAMFLRRSQVETCAIRNICMTLSGIKLWLAGHLGLNGEDDSLNVNCNSSDELNFGMKRGPSKMHFTVLEVRIFGELGAGEVIFYMLGLDCRQRCHSFCLRYKWWSINLVISLGQPDVYIQVYLPALCCAHSSSMLKFLVISSTGLEQIRVSCGKELEFLVDLYSPCYSSIQVKERENHFLQSTKHQLNSGDSGQNTEESEYELTVKVYQYSPGDGSAIEKLFIDGLCSKKNSELCASAKYANYWLVRCLEDTEDKCPIHRMLLVVVVTWKVDAYAILRGAAIKIEQHLPCDIFHTRQASTEQVIKSYVSNSKEIQELQMPWDPGGFRIGNE</aaseq>

Gene Sequence

<dnaseqindica>1..2389#3874..3896#ATGGAGGTGTTGGGGAGGCAGCCATGCAAGATGGAGCAAGAATTAGGTTGGGAAGGTTTTCATCCAAGCAGCGCCCACCAACTGTTCGATGGAATGCCAAGCCAACCTGGGTTGTCCAAGGAAGATCAGAGGATATCTAAGCCCGTTCCCATCAATTCCACCATGAATATAGAGGAGAAATGGCTAGATGAAGCTTTGGATCGGATATTGGAGAAGTTTGAACAAATGGAGGCCAAGCGCCGGCAAGAGGACAAGCTCAATCAAATTTTTCAGAAGCTGGAGGAGATAGAGGCTTGTAGGAGCAAGGCTTCTGAGGAGACGATTGCTGCCATCAGGGCAACCACCGCCATCCTCAAGGCTGCATCATCTCCGATACCTATGGCACCACCTCCTCCAGTGCCCACCAACTGTTTGATGGAATGCCACAACAACAACATCACTTTGGTGGCAGTGAATTCAAGTCACATCGGCGAGGTACTTACCCCGATGGTTGCCTTCGAGCTTGGGGACGTTGAGGACAAGGATCCCGTCCCCTACATTGTCAACAAGGATTCCCGTGACAAGGATGACTCCCTGCTCAATCTCGACACATCCAACGTCATTCCAGTGATTGCAGCCTCCTCAACAAGCTTGCTTGTTCATGCCGAAACTGATTCCATGATGTTCGCTAAGTGTTTGAAGTTGGGTCTAAATGTCAACACTAGTACTGTCCAGACTGGGGTTGTGTTCCCACTCTTTCTTGACGAACTGGACATCATCACAGCACCAGGGGAGTCCATGCTAGTCATGGTGCAAAGGTTGGGTTCTGTTTTCTTCCTTAAAATGCTGGCGCATGACGGGTGTTCGATGAAATGTGCTAGAGATGACAAGTTGTTGATGGAGCCTTCCAAAAAGAATCCATGGCCACCCCCTTGGTTAGGTGGAGTAGTTAGAGTATGTGAGTTGAGGCATGCCCCATGGACAGAATTGAACTCTTGTTGGGCAACAGGGCATTTAATGCCACCATGGCCACCACCAATTCGACCATGGCCCCCATCACAACAAGCAAGTTTCAGATTTGTGCCTTTTCAAGCTAGAAACAGTGAGTGTGGCAACTCGGTTACTGCCTTGTCTACCATTGCTTGGAACAAGTGGAAAAAGATAAGGAGTACTGCTTGTGACTCTTGCTTTGAGCAGGAAATGAAAGAGTGTTGGGATTTTGATTTGGCTTTGCAGTTTCCATCCTCTCAATTTTTGGAAACATTTTTCAGCTGCTATCAAAATGGAAGAAAGGGAGCAACCTCACTACCACAGTCTGATGAATTCAAGCAAAATGGCATAAAAAATGAAAAGAAGTCAACACCATGGCTATATCCTAATTGCAGCTGTGATGGCATGTTGAACATATGCTCACAAATATTGCCTTGTCAAAGATGTTCTGCCATGTTCCTACGAAGGAGCCAAGTGGAGACATGTGCTATAAGAAACATTTGCATGACATTATCAGGAATCAAACTATGGCTAGCAGGTCACTTGGGTCTGAATGGTGAAGATGATTCGTTAAATGTGAACTGCAATTCCTCAGATGAGCTAAATTTTGGTATGAAAAGGGGTCCATCTAAAATGCATTTTACTGTGTTGGAAGTGCGAATATTTGGGGAGCTTGGTGCTGGTGAGGTTATCTTCTACATGCTTGGGTTAGACTGCAGGCAGAGATGTCATTCCTTTTGTTTGAGGTATAAGTGGTGGAGTATAAATCTTGTTATCAGCTTGGGACAACCTGATGTATACATTCAGGTTTACTTGCCTGCTCTCTGTTGTGCTCATTCCAGTAGCATGCTGAAATTTTTGGTTATTTCAAGTACTGGGTTGGAGCAGATCAGGGTTTCATGTGGCAAAGAATTGGAATTCTTGGTTGACTTGTACTCACCTTGCTATTCATCTATTCAAGTAAAGGAAAGAGAGAACCATTTCCTACAGTCAACTAAACATCAATTAAATTCCGGTGACAGTGGACAAAATACTGAGGAAAGTGAATATGAGCTCACTGTCAAGGTTTATCAGTACAGTCCTGGGGATGGTAGTGCTATAGAGAAATTGTTCATTGATGGGCTTTGTTCCAAGAAGAATTCAGAGTTATGTGCTTCAGCTAAGTATGCTAATTACTGGCTTGTAAGATGCCTGGAGGACACAGAAGATAAGTGCCCAATACACCGAATGTTACTAGTAGTGGTTGTTACATGGAAGGTTGATGCCTATGCAATTCTAAGAGGAGCTGCTATTAAGATAGAGCAACATTTGCCATGTGATATATTCCATACAAGACAGGCAAGTACAGAGCAAGTTATTAAGTCATATGTGAGCAACTCCAAGGAAATTCAAGAGCTACAAATGCCATGGGATCCCGGTGGTGAGAAGCTTTCTCAATTCATGTTGTCGGCTTGCGGACAAGCCGAAATTCAAGAAAAGGGGATTGTTAGGGACTCGAGTGGGCCTTATGATGGGCTGGTTCTCACGCAAGCATTGGCCCAAGCCAGCCCTAATGGAGAGGCAACAAAACAACGACAACAACAATGCTCGAGAAGGCATCAAACAGATCAGACATCGGCGGCTTCGGCCACGGCGGCGGCTTGGTTCGGTTGAACCCCGTCAATCTCTATTCCTCTCATACTCTCTCGTGTTCCACCTCACTGCCACTTCTAGAAGCTTCCTCTACTTCTCCCCATTCAATTGCTCTTCTATTTTTCTGAGATTGTATTTGAATTTGATTATTCTTGAGATTACTGAGTTGGAAGAAGAGGGTTGTTAACACAAAGGTCTAGGGGATTAACTATATAGGAGAGTAAAGGTCTAGGAGATAAACAACCTATAAATAAATAATCCTAATACAGTCCAAATACCCTCTTTGCAAGCTTATTTGCATTTTCCTTCTCTAACCTTTAAATAAGATACCAATCATTAAGCCTGTATTGTTTGTCACCTGAATGTATAAAGTCTGACATAAGACTTGATGTTTCCTTAGAAGTTCCATTTACTTAGGATGTATAAAGTCTGACATAAATCTAGGTACTCCAGTAAACTGTTTAAGTTAGCTAAACAGGGATCATTTAAGTAGAGGACACTGAAGCTGTTTCACAGCGCAACTACTTCCAAGAATTAAACTCCAGGTTGTATGCCATGATTAAAAGTGGTAACATCAATATATAGTGGGGAAAATAATTAAAATCCTGTGTGATTGATATGACCATATATTTTGCACTTGTTCTTCACAATGAGAAATGCGCAGTGATGATTATTGATGTTCGTATGACTCCTGCATATGTATGGTTTCTATACTATGATTATTGCTCCTGGCTGGCGTTACTTGACCTGCATCTGTATGGTTTCTATACTATGGTTTCCCGGAGCCAATCCCCTAGCGGTCCTGCCACACCACGCTGCAGAACAGGAGATCAGTTCGCGTTTCTCAGTAAAGAAGGAAGAGTAAAGGAATTTTTTTATAAGTTAGCTGTAACAAATGTCTAAGTTTGCTTTAGTTACGGGATATCAAAAAATCCTTTTTTGCCGGGCCAACCAAATTAACTGGAACTCTAATCACAGACTCCTCCAGAATTCCTCATCGCACCTGCTGGACTGCATAATGAACTAATTACAGACTCCTTCAAAATTTCCTCATGGCACCTGCTGGTATTATAAAAGTTGTGCCACCTGTGGAAATCATTAAAAAAAAGCGTTTTTGATGCATCTACTTTCATGGTACTGTTGATAGGTTGATCTACTGTCACGATGCGTATTTTGGTTTTGAGTTGCTTTCATCTGTCAAACATTATTTTTCAACCAATAGGAATAAGGGAACATAATTTTATTTTGTAATCATAGTTTCTTTGATTGCAGGATTTAGAATCGGTAACGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015542