BGIOSGA015543

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Revision as of 04:15, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015543| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015543, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA015543

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015543, complete gene.

LocusTag

OSJNBB0072N21.5

Ensembl Transcript ID

BGIOSGA015543-TA

Ensembl Protein ID

BGIOSGA015543-PA

Length

5277

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5176451..5181727

Sequence Coding Region

5181287..5181727,5177665..5177902),complement(5177376..5177551,5176921..5177273),complement(5176451..5176808

Genome Context

<gbrowseImage1> name=IndicaChromosome04:5176451..5181727 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:5176451..5181727 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAAGAAGCGGGTGGTCATCGTCGGCGCCGGCGTGAGCGGCCTGGCCGCGTGCAAGCAACTGCTGGAGCGCGGCTGCCGGCCGGTGGTGTTCGAGGCCGACACCGGCGTGGGTGGCGTGTGGGCGTGGACGCTGGAGGGCACCGCGCTGCAGACGCCGCGGCCCATGTACCAGTACTCCGACTTCCCGTGGCCGGAGACGGTGACGGAGGTGTTCCCGGACCACCGCCAGGTGATGGACTACCTCGACGCCTACGCGCGCCACTTCGGCGTGCTCGACTGCGTCAGGTTCGGCCACCGGGTGGCGGGGATGGAGTACGTCGGCGTCGGCAAGGAGGATGTGGCGGCGTGGGATGAGTGGGCCGGGAACGGCGACGCTTTTGGCTCCGGCTCCGGCGAGTGGCGACTGGAGGTGGCCGACGGTGAGGGCCATATTGAGACACACACTGCGGATTTTGTCATTCTTTGTGTTGGGAAGTACAGTGGAGTGCCCAACATACCAACATTTCCTGCATGCAAAGGTCCAGAAGCATTTGATGGCCAGGTGATCCACTCCATGGATTACTCCAAGATGGGCACCAAGAATTGTAAGGAAATGATCAAGGGCAAGCGTGTCACGATCGTTGGCTACCTCAAATCAGCACTTGACATTGCTGCAGAATGTGCAGAAGTAAATGGTACTGAGATTCCATGTACAATGGTGGTCCGAACAAAGCATTGGATCATACCAGACTATTATGCATGGGGCGTCCCCATCTCAAAGCTGTATCTTAATCGGTTTTCTGAGCTTATTATTCACAAGCCTGGTGAAGGCTTACTCCTTAGCATCTTGGCCACCCTCTTGACTCCTTTGAGATGGATATTTTCGAAGTTTGCAGAAAGCTATTATTCCATTCCAATGAAGAAGTATGGCATGGTGCCTGACCATAGCCTATTTGAAGCTTTGATTACATGCTTGATTGCCATTACACCCAAAGACCATTACAAGAGATTAGAAGAAGGCAGCATCGTTCTCAAGAAATCAAAGACATTTAGCTTTTGCAATGAAGGTGTGCTTGTTGAAGGCGAATCTTCGCCGATAAAGAGCGATATAGTGATCTTTGGAACTGGATTCAGAGGGGGACAGAAGATCAAGGAGATGTTCACTTCTGAATACTTTCAGAGCATTGCAGTAGGCTCTGCATCTACAACTATACCTCTCTACAGGGAGATCATTCACCCTAAGATCCCGCAGCTGGCGGTTATCGGCTATTCAGAAAGCTTGGCAAACCTGTACACATCAGAATTAAGGGCCAAGTGGCTCGCACATTTCATGGATGGTGGCTTCAGGTTGCCAAGCATCAGTGTGATGCAGAATGATGTCCAGGAATGGGAGAAGTTCATGAAGCGCTATTCTCGTGCTTACTTTCGCAGATCCTGCATCGGATTCCTTCACATCTGGTACAATGATAAGCTATGCCGGGACATGGGGTGCAACCCGAGGAGGAAGAATGGATTTTGGGCTGATTTATTCGACGTTCATGGCCCTGTTGATTATATTGATCTTCACCCCAAGAAAGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MEKKRVVIVGAGVSGLAACKQLLERGCRPVVFEADTGVGGVWAWTLEGTALQTPRPMYQYSDFPWPETVTEVFPDHRQVMDYLDAYARHFGVLDCVRFGHRVAGMEYVGVGKEDVAAWDEWAGNGDAFGSGSGEWRLEVADGEGHIETHTADFVILCVGKYSGVPNIPTFPACKGPEAFDGQVIHSMDYSKMGTKNCKEMIKGKRVTIVGYLKSALDIAAECAEVNGTEIPCTMVVRTKHWIIPDYYAWGVPISKLYLNRFSELIIHKPGEGLLLSILATLLTPLRWIFSKFAESYYSIPMKKYGMVPDHSLFEALITCLIAITPKDHYKRLEEGSIVLKKSKTFSFCNEGVLVEGESSPIKSDIVIFGTGFRGGQKIKEMFTSEYFQSIAVGSASTTIPLYREIIHPKIPQLAVIGYSESLANLYTSELRAKWLAHFMDGGFRLPSISVMQNDVQEWEKFMKRYSRAYFRRSCIGFLHIWYNDKLCRDMGCNPRRKNGFWADLFDVHGPVDYIDLHPKKE</aaseq>

Gene Sequence

<dnaseqindica>1..441#3826..4063#4177..4352#4455..4807#4920..5277#ATGGAGAAGAAGCGGGTGGTCATCGTCGGCGCCGGCGTGAGCGGCCTGGCCGCGTGCAAGCAACTGCTGGAGCGCGGCTGCCGGCCGGTGGTGTTCGAGGCCGACACCGGCGTGGGTGGCGTGTGGGCGTGGACGCTGGAGGGCACCGCGCTGCAGACGCCGCGGCCCATGTACCAGTACTCCGACTTCCCGTGGCCGGAGACGGTGACGGAGGTGTTCCCGGACCACCGCCAGGTGATGGACTACCTCGACGCCTACGCGCGCCACTTCGGCGTGCTCGACTGCGTCAGGTTCGGCCACCGGGTGGCGGGGATGGAGTACGTCGGCGTCGGCAAGGAGGATGTGGCGGCGTGGGATGAGTGGGCCGGGAACGGCGACGCTTTTGGCTCCGGCTCCGGCGAGTGGCGACTGGAGGTGGCCGACGGTGAGGGCCATATTGAGGTGAGAATTTCGCTACGGCTTTGCGTGGAGGAAGTTTCCAAATTTGCTGGAAAAAAATAATTTATAAGTAAAACCTTATGCATGTGTCATTAACAATTTAAAAGCAAATAATAAAAATCTTAATCTTGACTAATTAAAATATTCGTAATTTTCCGTTAGTCGCAAGTCCGTCGGCGGTGCGCCTTTGCAGCCCCCGAATCCAATCGCTCTCAGAATTGGATACAGGGAAACACTTTCCAAAATCGGCACAACCGAATCGGATGCACACACCACAAGAAAAAGAACAAAATCCAACCAATCTTTGCCCCCAAAAAATCAACCACAATCATCACAAAATCAAAAAATAATCGTCCAAGAAGAACAACAATATACATCACAAACTTCACTCGCCTGCCACCGGAACCGCCCTCGGCCATCGCCACCGCGGCCCTCGGCCGTTGCCACCGCTGCCCTTGGCCGTCGCTACCGCCACTGGATCCATCCGGCGGCCACCGCCGACACCATCACCGCCGCCGGAGGAAGAAGAGAGGCGGCGGAGGGAGCCGCCGCTACCGGATCCGCCCACCGCCACTGCTGATGGATCCACCCGTGGACGCCGCCGACGCCGCCACCACCATCGGATCGGCCGCGGGACTATGGCGAGAGGGGACGGAGGGAGCCACCACCGCGTGATCCGCCTGCGGAGGCTGCCACCACCGGCAGATCTGCCACGGGACGCAAGGCTAGAGGGGATGAAGGGAGCCGCCGCCACCACCCTCGGATCCGCCCTCGACCGACGTCAACCCGCGCCACCGCTGTCGTATCCACCGTGGGAGGGAGGCGAGGGGGAGAGGAGGAGGGAGCGAGGAGGCAAGACAGGCCCGCGAGACGCCGCCGGCAAGGGAAGCGAGACGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTTTCGATCGAGAGAGAGAGAGAGGGGATCGTGGGCGCGGAAGGTGGAATGAATTTTAGGGTTATGGTTTTGGCTACAGATATTTATCNTTGGCTGGGATCAATCTGGACCGTCCGTTCGATCGGACGGCTGTGTCTTCTCTCGCATCGGGCCGCCGGACTGTTGGGCCTCCAAATGGGCCGCAAGGAAAATCAATGTTTCTCTCTTAGTAATTTTAAGCATCTTTCTATTTTCAGAAATAGCATTAATATCATTTAATTGTTTATGACTGCTTATTAATTTAATTCCAACTAAATTGAATAAACTAAAATTTTGGATAGATTTTTCTCATGATATGGATTTATTTTTCGACTAAAAATGTAAATATTTATTTGTCATGATATAGAATTTAAATGTAGACTAAAATTAAATAATATTAATTATTTTTTAATTTTATATGGACTCTATTCTTCTTCCGATATTCCTATTTTTTTATTGTTCTAATTAGTTTTCTATATGGACTCTAAACTCTTCTTTCAATATTTTTTTATTTTGAATTTTAATTCTTTTTCTAAATTATATTCCTATATGCACTGAAGGCTCTTTTGGAGAATATTCTAGACTCCTCATCCAATATTATTTAATTTATAATTTATACTTTATATTAAGTTGTATTATTTATATAGATAGATTAATCTATTCAGTTTAGGTTTTTTTTTGGCAAAAGATTTGTTATATGCATATATCCAATTGGACAGCGTGATTTTTTTTAAAAAAAAAACAAAATGAATGAGTCATTGTGATGGGCAATAGGTCCCGATGTTTCGATAGGTATTGATAAACAGTTGATTTGGGCGGAGTCGTGACACAACTCGATCTGGCTTCTGAACGAACACGCTACTGAGCCCCGCAATCACAGCATCACATCTCCTCTGGTTATCAACCGTGCCAAAACTCGGTTAACCTCGCCGAGAAGGCTAATCCCTGCATGTGAATCGAAGAACACAAGTAAAAGCAAGATAGATTGCAACCAAATTGCATATGAATGATTAAGCACTCGAATTTGGGGTTCCACAAACTGATATAGCGGCGAAACTGTTCTTGACAGATTAATCTAAGCAAAACCTAACTCTAAACGATGACGGCTACTGAATAAATATGATTAGGGACGTCCTAGGTTTACCCTAGGGCGCACACCCCCTTGGGCTAAGCCCACGACATAATTACAAGACCCAAAACCCAAATCAGATTCAAACTGGATGAGATACGTGGCTTTGTTTTGTAGATTTCCGGCAGCTCGATAGGAATTTTGACGTGGGACCGAAACCATCTGAAAGTAGACTCCATAAGATTTCCAACAAGTACTTATGGACCCCGAAATTCCTTCTAGATCAGAGACTAGGTCCGTTTGAAGTTGATAGTGTCAGGAGGCCTGAATCCGAATCCAAAACGTGTAGAACTTTATCTCTCGTCTTCTATGGACCAAAAGTGATGTGGTGAGATGGAAGTGGACTTGAGAAGATCTTGGTTTGGTCCCCAGTCAACTTCTTTAATCATCCATGTATTCATTACGCTCGGTCTCTTTTCTTTCACCCAAGCAAGTACCTCTGCAAACGAAAACACACGAAACACATTATGTAGCAACGCTTGTTCAAATATATAACAAGTAAATCTAATATAGAACATATGCACCTTTGATTAATTAATACATAAGTTAATCATGGTTATATCCAAGCTAGTTTGTGTCCTCATCACATTGTCTACAATGAGTTCTCCTCATTTTTTATATTTTACTCCAACTAATATGAGAAATCTAGACCATAAGAGATAACGTGGATGCTTCTTTTTCTGTTACTTTACTAAGTTAATAACATTAGTTTTTCATGTTGCAACGCACTATTGAATAATAATTTATTATTAGCTACTATATTACTCTCTATCATTTGAGACTTTTTCTAACGAGCAAAAGTACCAAAGCAGTGTGAAAGTAACTTCGGTTAAAAATAAAATATTTTTAGTTTTAATACACCGTAGCGAAAAGACACTTTCTAGTTAACTATGATAAAATCTTAAAAAGTCAAACTATGGGAAGGGTATGGTCAGCTGGTTCCGAAAGAGGCAACCTTGTGGCGCGCAGGGGCGGATCACTTTCTAGCGCGAGACATCCAATCGCCCAGTCCCATCATCCATGCCGATCGAGAGATAGCCATTGGCTAATGTGTTTCTTTCTTTTTGTTTTGCCTTTCTATTTTTTACATAAAATTAAATTTATAAAATTCATATCCAAAAGTCTTTATTCTCAACTATATATACTTTCGTATCACATATATAAGTAATATTGCAATTCTTGGTTAAAATAGGCACCGTGTTTTGAAAGAAAGGGAGTACAATATAATTCATCATAGTTTCCTTATCCCTAAATTAAGTGACATTTGACACTCGAATTTCTCATATTCCAGACACACACTGCGGATTTTGTCATTCTTTGTGTTGGGAAGTACAGTGGAGTGCCCAACATACCAACATTTCCTGCATGCAAAGGTCCAGAAGCATTTGATGGCCAGGTGATCCACTCCATGGATTACTCCAAGATGGGCACCAAGAATTGTAAGGAAATGATCAAGGGCAAGCGTGTCACGATCGTTGGCTACCTCAAATCAGCACTTGACATTGCTGCAGAATGTGCAGAAGTAAATGGTACTGACAAATTAACAATCTGATTTCCATCAACCAATTTTTCAGTATTCTTTTCCCTTGTTAGATGCTGAATTAGAATTTCCCCACTTAGTAAGTGTTTCTTCTTCGTGTAGGTACTGAGATTCCATGTACAATGGTGGTCCGAACAAAGCATTGGATCATACCAGACTATTATGCATGGGGCGTCCCCATCTCAAAGCTGTATCTTAATCGGTTTTCTGAGCTTATTATTCACAAGCCTGGTGAAGGCTTACTCCTTAGCATCTTGGCCACCCTCTTGACTCCTTTGGTATGGATATTCTGTTTTAATTATATTGCTAAAATATACTTTCTCTGGTTAAATTGAAGCAAGACTGATCCATGCATGTTTTCCCTCTTTGCACATGTTCAGAGATGGATATTTTCGAAGTTTGCAGAAAGCTATTATTCCATTCCAATGAAGAAGTATGGCATGGTGCCTGACCATAGCCTATTTGAAGCTTTGATTACATGCTTGATTGCCATTACACCCAAAGACCATTACAAGAGATTAGAAGAAGGCAGCATCGTTCTCAAGAAATCAAAGACATTTAGCTTTTGCAATGAAGGTGTGCTTGTTGAAGGCGAATCTTCGCCGATAAAGAGCGATATAGTGATCTTTGGAACTGGATTCAGAGGGGGACAGAAGATCAAGGAGATGTTCACTTCTGAATACTTTCAGAGCATTGCAGTAGGCTCTGCATCTACAACTATACCTCTCTACAGGTCAACTCAATAACTGTTTCTTGCCAAGGAGCAAAAATTTAATTTGTACAATTTCCAATTTCTATCCAGGACTGTGTCGTAGTTAATTAATTTGCTGCATGATTTCTCACAGGGAGATCATTCACCCTAAGATCCCGCAGCTGGCGGTTATCGGCTATTCAGAAAGCTTGGCAAACCTGTACACATCAGAATTAAGGGCCAAGTGGCTCGCACATTTCATGGATGGTGGCTTCAGGTTGCCAAGCATCAGTGTGATGCAGAATGATGTCCAGGAATGGGAGAAGTTCATGAAGCGCTATTCTCGTGCTTACTTTCGCAGATCCTGCATCGGATTCCTTCACATCTGGTACAATGATAAGCTATGCCGGGACATGGGGTGCAACCCGAGGAGGAAGAATGGATTTTGGGCTGATTTATTCGACGTTCATGGCCCTGTTGATTATATTGATCTTCACCCCAAGAAAGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015543