BGIOSGA015555

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Revision as of 04:15, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015555| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015555, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA015555

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015555, complete gene.

LocusTag

OSJNBA0055H05.9

Ensembl Transcript ID

BGIOSGA015555-TA

Ensembl Protein ID

BGIOSGA015555-PA

Length

7041

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5012934..5019974

Sequence Coding Region

5019597..5019974,5019149..5019514),complement(5018943..5019065,5014564..5014795),complement(5013480..5013556
,5012934..5013005

Genome Context

<gbrowseImage1> name=IndicaChromosome04:5012934..5019974 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:5012934..5019974 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCGCGAGGAAGGCCACTCCTACGCCGTCCGCGTCCCTGCCGACGGCGCCAACCCTTCCTACTACCTCCAATACGAGAAGCCCCTCGCCAACGGGCGCTGCCTCCACCTCCTCCCGGGGCGGGGCTGCACGCAAGCGCCGCCGGATGGAGGAGGAGGAGGAGAGCTCGTCCGGCGAACCCGCATCCGGCCCCAACATTGAAGAGGACTACCGCGTGTTCCTTCAGAACGTGCGCCTCGTTGGGCATGGCGGCTTTGTGCTGGAGCTTGAGGGCAGTGTGATCAGGTACGATGCTTCGGGCGCGGCGCTCAGCTCGGATGAGTCTTCCGATGAGTCCGTGATGGGTGCTCCGGAGCCCAATCCGCGTCGACGAAAGGCGAAAATTGTGGAGGAGGATCACGAGGAGGAGGAGGATGTGAAGAATGAGGTTGCCGTTCCGTCTAGAAAGAAAGATTTTACCATGGTAAAAGAGGATCAGGAGAAGAAGGGGAAGAGAGTGGTCGACCTTCCTGCTAGGGGGGAAGATGGTGCCATGGTGGCGGAAGAGGATCGGAAGAAGAAGCTCAGAAAAGAGTTCAACTTTCAATCCTTTCATTCTAAGGGGAAAGATGATACAACACCAGTGAAAAATCTGAAGGATAAGAAGAAAGAGGTTAAAAATCCGAAGGATAAGAAGGTTCATGGGAAGAAAGAGGTTGCCCTTTCTGCTAAGGGGAAAGATTGTCAATTAGCAGAGGGTGTGGTGATCAAGGTGGAAGAGGAAGATGGGCAGTTGCAGATTGTGCCGGCTGTGGAGAAACTAGCGACTACAACTAGACTGACAAACTTAAGCGATGGCCACAAAACCGCCCCTCGTATCGCTTCGGGGTCACATGGAGTTATATGGCCAATACATATAAATGATAGGGAAGAATCGGATTTCAAGCAAAGATTGATACATGTTCTCAACAAACCATTTAGCCAGGGAGAATATGACAAACTCTTTGGTATGGCTACTATTCGCAATCCATTGACAAGGGAACGTCGGACACGCTGTGGTGTGAAGTATTACTACTCTCAACATGAGAAGGCAAAATCATATTTTGATTGTTACCCAGATCTTGCCAAACAAGTTGAAGAAGCCAGCTATCCCAATCGCTTGGCTCTGTTGCGTGGGCTTTTCTTCTGGTTGGAGAATATTGGGCAAGATGATCAATTCAGGCCGTGGAGAGACGATCACAAACGCTACAAAATTATGTCTCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MSARKATPTPSASLPTAPTLPTTSNTRSPSPTGAASTSSRGGAARKRRRMEEEEESSSGEPASGPNIEEDYRVFLQNVRLVGHGGFVLELEGSVIRYDASGAALSSDESSDESVMGAPEPNPRRRKAKIVEEDHEEEEDVKNEVAVPSRKKDFTMVKEDQEKKGKRVVDLPARGEDGAMVAEEDRKKKLRKEFNFQSFHSKGKDDTTPVKNLKDKKKEVKNPKDKKVHGKKEVALSAKGKDCQLAEGVVIKVEEEDGQLQIVPAVEKLATTTRLTNLSDGHKTAPRIASGSHGVIWPIHINDREESDFKQRLIHVLNKPFSQGEYDKLFGMATIRNPLTRERRTRCGVKYYYSQHEKAKSYFDCYPDLAKQVEEASYPNRLALLRGLFFWLENIGQDDQFRPWRDDHKRYKIMSL</aaseq>

Gene Sequence

<dnaseqindica>1..378#461..826#910..1032#5180..5411#6419..6495#6970..7041#ATGTCCGCGAGGAAGGCCACTCCTACGCCGTCCGCGTCCCTGCCGACGGCGCCAACCCTTCCTACTACCTCCAATACGAGAAGCCCCTCGCCAACGGGCGCTGCCTCCACCTCCTCCCGGGGCGGGGCTGCACGCAAGCGCCGCCGGATGGAGGAGGAGGAGGAGAGCTCGTCCGGCGAACCCGCATCCGGCCCCAACATTGAAGAGGACTACCGCGTGTTCCTTCAGAACGTGCGCCTCGTTGGGCATGGCGGCTTTGTGCTGGAGCTTGAGGGCAGTGTGATCAGGTACGATGCTTCGGGCGCGGCGCTCAGCTCGGATGAGTCTTCCGATGAGTCCGTGATGGGTGCTCCGGAGCCCAATCCGCGTCGACGAAAGGTTTGCCAGCTCGTTCTACTTTCCATCTTCTTGTTTACTGTTGTTGTGCGCGTCTCTGACATACATGTTTGCTTGCTCTTAGGCGAAAATTGTGGAGGAGGATCACGAGGAGGAGGAGGATGTGAAGAATGAGGTTGCCGTTCCGTCTAGAAAGAAAGATTTTACCATGGTAAAAGAGGATCAGGAGAAGAAGGGGAAGAGAGTGGTCGACCTTCCTGCTAGGGGGGAAGATGGTGCCATGGTGGCGGAAGAGGATCGGAAGAAGAAGCTCAGAAAAGAGTTCAACTTTCAATCCTTTCATTCTAAGGGGAAAGATGATACAACACCAGTGAAAAATCTGAAGGATAAGAAGAAAGAGGTTAAAAATCCGAAGGATAAGAAGGTTCATGGGAAGAAAGAGGTTGCCCTTTCTGCTAAGGGGAAAGATTGTCAATTAGCAGAGGGTGTGGTAGGTTCTCATGGCCCAATGTTGGTTATTTCTGGGTCTGATGTAATGTGTGTGACAAACATGCGTGACATGTGCCTGATCAGGTGATCAAGGTGGAAGAGGAAGATGGGCAGTTGCAGATTGTGCCGGCTGTGGAGAAACTAGCGACTACAACTAGACTGACAAACTTAAGCGATGGCCACAAAACCGCCCCTCGTATCGCTTCGGTGAGAATTTCTTATGTTATGCATGCCAGTTTCTCTAATCTGTTATGTCGGACATTAGCTAAAGATCATATGTTTCATGTGCACTTTCATTTTGGAAATAGTTCTCTGCATCTGTGCTTTGCAATCGGTACTTAGCATTGTACAAATGTCAAACCTTCTTTGTTGTAGAACCTGTGTCTTCCAACTTTTTTTGAGTGTTGATGGCTCGTACATCATGTCGAAAAATCGTACTTGAATTCAAATTAGCTAGTATATTATTGTTAAAGATGGAAACAGTTTGACTGCTTATCGTCCACTTTTAGCATGCTTGATCAACTTTAGCTTTGCACTACTTGCCCTTCTGAGTGCTTCTTACTTCACAATTTTGGCTAAAACATGACAAATTAGCCTACGTGCCTATTGCTGTGTAATTCTGTATGAACATTATAGTCAATATGTTTTTACAATTGAAAAATGATAACCTATTTTCGATTGTGAAATTTATATTTTCCCTGTTGCACTTCATGAACTTCATCATACTAACCTAACAACCCTCACAGCTGTTTGTTTTCTTTTGAATGAAGTTCAACATCAAACCATGAAACAAAAAATCTTCAAACTTTTATTTCCAGTACAAAGAACCCATGATCCAACACCAGTTGATTTTCTTATTGATTGTTTCCTGTTACAAAATTTGTTGATTTAGCGCTATAGTACATGCTAAATGGTTGATGAAGTCAGCCATTGAGTCCGCTATGAGAAGCACTATTTTGTTTGTTTCCAATATCTAACATTCATAGTTTGAGTGTTACTGGAGTACTTTTGTTGGTGCTCATGGAAGAAGTGGGTCTGAGACCTGGGATGGCTCAGCAGGAGGGAAAAACAAAATCTGCCTATCTGGTTAGGCTTCTAACGATAATTAAGAGAGATATGTGTAAAGACTAAAACAAGATATTTGGATTTGTTGTTTTTTGTTTGTCCGCCTTTTGGCATTCATGCTTTGTTTCTGTGGCCCCCAGAAGCTACTACAGGGCTTTGAGATAGCTGCAGAGCCAATTGTACAGAATTAGGTTGTTTGAGATTATGTTTGAGCTGGTCCTGATTAGCATGCATTCTCAATAAGACACTTGTGTTAAATTGTTTGCAGCTCTTTCTGTTCATAAATCCAGCATTGGATCTCTCTTTTTTGTTTCGGCCTACCACAGCTTGATTTCATGACACTTTTCTTCGGATGTTTTGTTTGAAAACAGTTTGACTTGACAAGTTGTAATGCTACGTGAAGGATTAATGTGAATCTAAAATTGGGCTGTATTGAATTATAGAACAGGCTATATCTGTTTAATCTGCTTTTGATAACATGGGCCTAGCAAATAAACTATTCATTTTCTGTTCTATTCAATTAATGAATAAATCTGAAGCTACAACTTCACAAATCTGCTCGACTTTTACCTTGTCTGCCTTAAAATGATCATCAGTAGTTGCTCGAGCAATTCCCACTTTTAATAATATAAACAAACTCCTACTTAACAATGTTTCCGTAATCTGGTACTCTGTAATTCCTGCGTGTGCATACTACGGTTTCCTGGCCTTCTAATATACAATGTTTCATCTAGTCTAACTGACTAGAAGTTCTGCCACTGCAATTTATGTACCAATTTTGGTTCTAAACTCTAGTTTTAAGCAATGTACGTGTATAAGACAAGACTCATATGTGCATGGTCCAGTCGAGAAGACGTCCTTGGCTTAGAATTTCTTTTTCATTTGTTCAATGTTCTTGGTCACTCTGTATGCCGTTCATGACTGGGTTCGTGCACCATTAGACAGTGATAATTAGTCGCTGTTATCATTATTCATGGGCCATCTGATGGGCATAAAACTCTCTTCATCAGTGATAGAATATATTTGATTATTGCCATTAGCAAACAGGGCCTATTCACATATTGGGCCTCAGCTCAAGTACATAAAACCCAATAATTGGGAGATAATAGTTGAAATACCATTGCCTAAATTGCCTTAACACCATCACTTGTTAGAGTTCAAGTGAAGCTATGAAAGCAAATCCCCAATAATTAGAGGATCCTACAAGTTGCCCAATAATCATTTGTTGAACTATTTCCTTAAACAGATCTCTTCACAATTTTGTTTAGTTAAGGAAAATGATGAAACTAGGCAAGCACACAACCCTTACATCGCCAAGTGCTTAGCACTTGTTACAAAGAAAGGGATAAAAGGCCAAAAAAATATTACATAACAAAGAAATTATTGTTGGCCAACACAAACCTGCTTCTGGAACAACTAGAGAAACATTCACATGAACTCGATAACTATGCAGCAAAAAAGTTTTGAGTTTTTAATCTTCGGAGGAACACCTCCAAGAAGGGTTACAATCCATTGTCATATCCAACCATTACAACCCATCGTCATCGCCAAATCCAACCTGTGAATATTAGATAATGGATTTCTCTCCGCATCTCAAGTACCAATTCTCCATGGCAAAGCTTTCAAGAAGCGCACCTGTCGACGCCATTGATGAAACTAACCAATAAATAGTAGAAATATGGTTTTGATCCTTGATGAATTATTAGAGCTTGTAGATAATTTCTCAACACTATCTAATTGCTAGATCCAATTAATTTAGACTAGATTGATGGATATAGCAAAGTGAAGACCAGATCATCATAGGCTACCATAGCTGTCGAGCCATCATGATCTCCACCCTGCTGATGAAGGAAGGTCGACCGTTGGGGAAGTCATTCCTCGACCACCACTCCCTCCACATTCTAGCTATCCCCAACTCTATCCACCGCCACCATAGGTTGGCATGCCTAGAAAGGCATATTTGTCAAGGTTTCATGACCGCTGACGATCGCGTACCATCACTCTCCATGCAGTGAACTACAGCTGCCAACGGCCCAAAGAATCTATGTTGGACGATGAGCAGTGAGGATATGGAAATGTTGGGCGGTGCGGCGAGGATCACACAACCATTTAATCGGATTTGAAACCCTATTAGGTGGAGTCTTCCAACTACCACACCAATGCTGTTTCCCGAGAACTCTTTATAGCTAGGGCATGTTATATAGTTTTACAACATTTTTAACCTTCTTAATGATTATGCATTCTGGCATTTTTGTTTATTGATAATGCTGTATACCTTGTTGGTATATAGGTCTTTTTGCTATTTATATGCACATAGTTTCAGAAGTATTCATTATTTGGCCTTATTTGGGAATAATTGAAATTGTGCTGGGATATGATTCGTACTCATTTCCAAGGCTAAAAAAAAGACGAAAACAAATACACTGAAGGAATTTTCGGTTTGCACCCAATCCATTCTCATCTCATAGCTCTGTATGTTGTTGCGCGAGGCACCAGCTACATGGCTGCCTGTCTCCAAGGACACCAACTTGAACATAGTGGTAAAATTTCTAGGAAGCAAAGTTTTTTGTTTGTTCACTTTCCTGATGTGAAACTCTACAAGAAACAAAAACTCATGTTAGATATACGACTGCAGCCAAACAAGAAACAAAAGTATAAAACACATTTTCATTTCTGTCATCTTATCAAATTGGTTAACGAAATGTCAAATGCGGTGCATGGACATATGCGAGCACCAATGGGAAAGCTCATACTAAAGCAATTACATGAAGTGGGTTAATACATGGCAATTTTCCACTTGGTGGGGTGGATTAGTTGGATGAGTTTTGACTTTGATTGCTTTTTTTTAATACTAACATTATCTTACCTTTTTTTTTTCTGTTTTTCCACACATTTTCTTCCCTTGTTCCATATCTCTTAGATGGCAAGACTTATTGGACCACATTATTCTCACCAGGGTTGACTACTAGTTCCTTCTACATTGAAAGAATGCGATGGAGGCTAATAGTTCGAATCATTCACGAAAATTGTTAATGTTGTAGTATTTGTATATTTGTGTACCATGCTTATTCACAGTGCACATAGATTTTTAAAAAGGAAGGAGCCCATGTAGTTCTGATCCTTTTGTTTGATTGTTGGAATGCTTTTGTGTTTCTCATCTTTGATTAATGCTATGCCATACTTTTATTTCTCGTAATTGTTAGTTGTATTTTTAATTTTAGAAGTTGTCAGTATGTCATAACATAGTTCCTTTTAATTGCAACACATTTCTCCTTATTCATTTTTCCAGGGGTCACATGGAGTTATATGGCCAATACATATAAATGATAGGGAAGAATCGGATTTCAAGCAAAGATTGATACATGTTCTCAACAAACCATTTAGCCAGGGAGAATATGACAAACTCTTTGGTATGGCTACTATTCGCAATCCATTGACAAGGGAACGTCGGACACGCTGTGGTGTGAAGTATTACTACTCTCAACATGAGAAGGCAAAATCATATTTTGATTGTTACCCAGGTATTCTTGCTTATGTATCATGCACATTCATTTGGTATGAGTGTGACAGACATTTTTTTTGATTTCTGCCATGTATTATTTTGTTGGTGGAAGAAATCTTTCTATAATTACAGAAACGATAATGTGTACTGTTCTGTTTTTCTGTGCTTATTGAACATCTATTTGTTATCCTTTATGGAACGTTTAAAAGGTTTTCCTTTGCTCGCAAGTGTTATTTTCATTGTTTGGGACTATATGGTTTTTAGAGTTTTTACATTTTTATGCCTTATTCAAGTCTGCCCATGACAATGTTTATCCTACAAACTGACCATAACACGGATGGATGATGTTGTATTCATCTGTGCTCAAGTATATGGAATGTTGGATCATTTTGTACAACACTGCGAGCGTCCAAAATAGTTTTGTTTTGGACTTCATACTGATCTTATGTGAGCTAAATTGTTTCATTTAAAATTTTCAGCATGTATGCAGATGTCACTGCTGTGATGGGAATGCTGAAAAGAACAGTGGATTTATCCCCATCGAGATAATCCAAGAAATGCTATTGACAAGTGCCCAATTCCAAGAAATGCCATCAACAGTGCGAGTTCCATAAAATGCCATCGTACACGCAACTTTGTTCTAGAAATGTCATCGCCGTTAGGGTTGCGCCCATCCTGCCCCGTTAAATGCATTGTTCATCCTATAGCACATAAATGATAGCTCCTAACGGAACCGTAATGGCAATGGCATTTTCGGGACAACATCACTGATACGACGACATTTCATGGAACTCGCACTTGTCGATTGCATTTCTTGGAATTTGGCGCTTGTCAATGGCATTTCTTGGATTTTCTCTATTCGATTAAGTATAATTTTTATTTTCTTTTGCTTTTGATGTTCTTTTGCCCTCAAAGAGATGACAAAGCTGACCTTGGTATCAAATGAAATCTGCAAAAGTGCACTAATCTGGTTTGTATTCTGTTGTTGAGCTATAGCAGCAATTAATTTTATTTATTTGACTACAGATCTTGCCAAACAAGTTGAAGAAGCCAGCTATCCCAATCGCTTGGCTCTGTTGCGTGGGCTTTTCTTCTGGTTGGAGGTAACTTCATACTGTTTTGTGCAATGCTAGTTTTTTTTTTTTTTTTTGATCAAGGGCTTGTCAATTTGTGCAATGCTAGTAATTATGATGTTGGAGAACTTCATAGTGTCTAGCTGCTAATATTCACATTTCCATCCCTGTTAAGCTCTCAATATATTTGTGTTTACTTGCACAAACTACTCCCAATCAGAGCAGATTATTTGTTTTTGGTAGATTATTTGTTTTTTAGTCTAGCCCTGTGATGTATGTTACACTTGGACTGCTACGTGCTAAATATGGGGCTGGGACTAATTTCTGGGAATGATGCCAAATGTCACTAGTTTGCTTCCTTTTGCAGCATTAGTGTTCGTATTATCTTCGTACTAGCATGCAGTGGCATACCATTTGGCTACATGCTTGCGCAATAGTATGATTTTTTTTTTGAACATTTACTCTAGTTCTTTGTAGTTTTCTTGACTGTGTATTGTTTTGTAGAATATTGGGCAAGATGATCAATTCAGGCCGTGGAGAGACGATCACAAACGCTACAAAATTATGTCTCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015555