Os12g0638200

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Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0638200| Description = Similar to Peptide transporter| Version = NM_001073909.1 GI:115489779 GeneID:4352905| Length = 4348 bp| Definition ...")
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Gene Name

Os12g0638200

Description

Similar to Peptide transporter

Version

NM_001073909.1 GI:115489779 GeneID:4352905

Length

4348 bp

Definition

Oryza sativa Japonica Group Os12g0638200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27572776..27577123

Sequence Coding Region

27572966..27574611,27576886..27577006

Expression

GEO Profiles:Os12g0638200

Genome Context

<gbrowseImage1> name=NC_008405:27572776..27577123 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27572776..27577123 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccggcgccgtcgcaggagcaaactaagctggcgccggagaagcagcagcacatctccggccatggcgagcaagccgtccggtaccatggatggaaggtcatgccgtacgtcatagggaacgagacatgcgaaaggctggggacgatcggcacgacggcgaacctgctggtgtacctcaccaccgtcttccacatccccagcgccgccgccgccaccctcctcaacgtcttctccggtacctccaacctcgcccctctcctcggcgccttcctctgcgacgcctacctcggccgctacgccaccctcgccgccgcctccatcgcctccttcctcggcatgcttgtgctcaccctcaccgccgccatcccatctctccaccccccaccttgtgcctcctcctcgtccacgtcgtgccagggccccacgcaccgccagctcgccgcgctcctcgcctccttcgccttcctcgtcgtcggcgccggcggcatccgcccctgcaacctcgccttcggcgccgaccagttcgacccggccaccgccgcgggccgccgcggcatcgccagcttcttcaactggtactacttcaccttcaccatcgccatgatggtgtccgccacgctcatcatctacctccagagcaacatcaactgggccatcggcctcgccgtgcccaccgcgctcatggccctctcctgcgcgctcttcttcatgggcacccgcctctacgtccgcgtccgccccgagggcagccccttcaccagcttcgcccaggtgctcgtcgccgccgcccgcaagaggcgcctccctgccccggcgtctcctgccgacgacctgttcgatccgccgcaccggagcaagctggtggccaagatcaagcacacggaccagttccggtggctggacaaggccgcggtggtgacggcggaggacgcggtggtggacggcatgagcgcggcggcggcgaacccgtggcggctgtgcacggtgcagcaggtggaggaggtgaaggtgcttgcgcggatgatcccggtgtggtcgtcgtcgatcgtgtactacgtgatgctgacgcagctgggcacgtacacggtgttccaggtgatgcagtcggaccggcgggtggggaggtcggggttcgaggtgccggcggggtcgatggtggtgttcaacatggtggcgctcacggcgtggctgccggtgtacgaccgcgcggtggtgccggcgctgcggcgggtgacggggcgtgaggaggggatcagccagctgcagcgcatcgggatcgggctggcgctgtcggtggcgacgatggcggtggcggtggcggtggagcagaggcggcgcggggcgggaggagggtcgtcgtcgtcgtgggcgtggatggtgccgcagcaggcgatggcggggctgtcggaggcgttcgcggcgatcgggctgaacgagctgtgctacaaggagtcgccggagagcatgaggagcgtggcgggggcgctgtcgccgctggcgctggcggtggcgagctacgcgagcggggcgatggtgacggcggtggagcgggcgacggggtggctggcgcaggacatcgataagggccgcgtcgacctcttctaccttgtggtgggcgccatgtcggccgccaacctggcttacttcgtggtctgcgcgctctggtacaggtccaagaacatcgccgaccacggcggcgttgagcttcttcagaccagctccaagcacaacgccgacgcgccgccggccatggcggtctga</cdnaseq>

Protein Sequence

<aaseq>MPPAPSQEQTKLAPEKQQHISGHGEQAVRYHGWKVMPYVIGNET CERLGTIGTTANLLVYLTTVFHIPSAAAATLLNVFSGTSNLAPLLGAFLCDAYLGRYA TLAAASIASFLGMLVLTLTAAIPSLHPPPCASSSSTSCQGPTHRQLAALLASFAFLVV GAGGIRPCNLAFGADQFDPATAAGRRGIASFFNWYYFTFTIAMMVSATLIIYLQSNIN WAIGLAVPTALMALSCALFFMGTRLYVRVRPEGSPFTSFAQVLVAAARKRRLPAPASP ADDLFDPPHRSKLVAKIKHTDQFRWLDKAAVVTAEDAVVDGMSAAAANPWRLCTVQQV EEVKVLARMIPVWSSSIVYYVMLTQLGTYTVFQVMQSDRRVGRSGFEVPAGSMVVFNM VALTAWLPVYDRAVVPALRRVTGREEGISQLQRIGIGLALSVATMAVAVAVEQRRRGA GGGSSSSWAWMVPQQAMAGLSEAFAAIGLNELCYKESPESMRSVAGALSPLALAVASY ASGAMVTAVERATGWLAQDIDKGRVDLFYLVVGAMSAANLAYFVVCALWYRSKNIADH GGVELLQTSSKHNADAPPAMAV</aaseq>

Gene Sequence

<dnaseqindica>2513..4158#118..238#ggcgcccggccggccggagacctcttcttcttcatccatcctttctttctttctttctttcctaggcctaatcttacataaattattcacacggacaaatctagctaagcacaaggtatgccgccggcgccgtcgcaggagcaaactaagctggcgccggagaagcagcagcacatctccggccatggcgagcaagccgtccggtaccatggatggaaggtcatgccgtacgtcataggtatgtactactgtatcttctagctcctccatggttatatatatatatatatatatcctcccggcctccctagctcttaattagctcctcaccctcagctctgttcttctcctttaactctctccggtttggatcctactcttctcttctttgagcatgcatgtactgtatgtttttattttgaacacaaaaaaaagtaagatggaaatggacatccaacatggctgcagctagctatagcagatgatgacctcctgtagtttagtgaagtgcatagtctcctacatcactagctagatctcttccttttagttagttgctggctccaaatctcagctatcaattcatacgcaatttgtgcgcatatatgcttcagctcgctggatttgcattattgcttcatccatacaccaaagtacacacttcctcttttttttccatctcttttttcccaattaaacgtcaatgaaaaaataaaagcttagtagagaagttagatggtaaatgtggtgaagttatacaatcaaggaagcaagttagtccaaaggcaaccgatgaagcaggcagatggagaggagccatggaggtagaaagaagaagaaaagaagaagaagaaagcaagaaagaagatagacaagatagaagcactgtgcactgcagctgcacatgcctgatggcaccaccaacaatcaattgcattaaagttacccaactgcactacgctagggaagtgtcctcttctcagcccagcccagcgtggtagtaccaatctcagcacctctctctttttcgttttgctttttcaaccacctactggtttcaaactgatttttcttttctttccccccattgaaaccgtttcaattccagtagaagtagggaaagggttcatatgcgttccaaagcacccccaaaaaattatcatctgcacggtgcagtttttaagaccttggaaaacaattatcatttgcatagaggagtatttctctactattatgtcatccatatttaagttggtttttaagttttttcgtttttggaaatacatatccgtgtttgagttgtattttaagtttgttttctttaattgaagatgttttttgtggtattttggtatgccatctgtatttgagccggtttttaagcttgtttccttttggaagcataaaaggtgtcgtataacaaatcttttaaaaaaacttgcatgctaacttgagatgaaatatggactaataattgcaactcatgattttctgaaaaaatatcaagagaattcctaaagtaaattttatcctaactaaaacgtatagcaataataaaattttaaaaaaatatttacatgttgtaatgcacggacattttttctagtcaaacatatataaaagaattactgacaactccctattcttttaaaattatttaccggattatgaaataaattattcgctgcacacttcaatttttctataaacttttttctactgcattatttagaccacttattactaaacggaggagtattttgttaagtttatttattacaatatttcatccatccaaataataagtaaataatgtgcgataattaattaatccactcactaatctatatcaaatggggcctttaagatgatgccatgtctagtagatcttataataccattttgcaaataataatttgtaaataaaaaaagagaaaagtacgaattacccctgaactattggatgagtatgaataacaccactaaactcgaaaatcaaacatcgctcaccccgaactttcaataccggacaagaaaccccctagcactattgcgagcagtttagagttcgtatagcacacgtggcagtccagttagtaatttttttctaaaaaaaatagcgggcccacttgtcagaatccccacatctatttctctctcttctccctctcgttctaaagagcgcggcggcggtgggccggccacgcgtttctgaaggagagggggaagagaaagagggtgtggattctgtcaagttggcatgctattttttagaaaaatattgctgagtggactgtgccacgtgtaatattcgaactccaaaccgctcgcaacattgttcccggggagggtgggggaggggggtttcttgttcggttttgaaagtttgaggtgagcgatgtgtggttttcaactttagaggtgttattcgtactcacccaatagttagggggtaattcttacttttctcttaaaaaaaagggatggagtttgacacgagacgatggatcagggaacgagacatgcgaaaggctggggacgatcggcacgacggcgaacctgctggtgtacctcaccaccgtcttccacatccccagcgccgccgccgccaccctcctcaacgtcttctccggtacctccaacctcgcccctctcctcggcgccttcctctgcgacgcctacctcggccgctacgccaccctcgccgccgcctccatcgcctccttcctcggcatgcttgtgctcaccctcaccgccgccatcccatctctccaccccccaccttgtgcctcctcctcgtccacgtcgtgccagggccccacgcaccgccagctcgccgcgctcctcgcctccttcgccttcctcgtcgtcggcgccggcggcatccgcccctgcaacctcgccttcggcgccgaccagttcgacccggccaccgccgcgggccgccgcggcatcgccagcttcttcaactggtactacttcaccttcaccatcgccatgatggtgtccgccacgctcatcatctacctccagagcaacatcaactgggccatcggcctcgccgtgcccaccgcgctcatggccctctcctgcgcgctcttcttcatgggcacccgcctctacgtccgcgtccgccccgagggcagccccttcaccagcttcgcccaggtgctcgtcgccgccgcccgcaagaggcgcctccctgccccggcgtctcctgccgacgacctgttcgatccgccgcaccggagcaagctggtggccaagatcaagcacacggaccagttccggtggctggacaaggccgcggtggtgacggcggaggacgcggtggtggacggcatgagcgcggcggcggcgaacccgtggcggctgtgcacggtgcagcaggtggaggaggtgaaggtgcttgcgcggatgatcccggtgtggtcgtcgtcgatcgtgtactacgtgatgctgacgcagctgggcacgtacacggtgttccaggtgatgcagtcggaccggcgggtggggaggtcggggttcgaggtgccggcggggtcgatggtggtgttcaacatggtggcgctcacggcgtggctgccggtgtacgaccgcgcggtggtgccggcgctgcggcgggtgacggggcgtgaggaggggatcagccagctgcagcgcatcgggatcgggctggcgctgtcggtggcgacgatggcggtggcggtggcggtggagcagaggcggcgcggggcgggaggagggtcgtcgtcgtcgtgggcgtggatggtgccgcagcaggcgatggcggggctgtcggaggcgttcgcggcgatcgggctgaacgagctgtgctacaaggagtcgccggagagcatgaggagcgtggcgggggcgctgtcgccgctggcgctggcggtggcgagctacgcgagcggggcgatggtgacggcggtggagcgggcgacggggtggctggcgcaggacatcgataagggccgcgtcgacctcttctaccttgtggtgggcgccatgtcggccgccaacctggcttacttcgtggtctgcgcgctctggtacaggtccaagaacatcgccgaccacggcggcgttgagcttcttcagaccagctccaagcacaacgccgacgcgccgccggccatggcggtctgacgacactgacagctactacacacgtacgctgacttttcatacttactatatactacttgatgcatatgcatgtgtccactccatgatgaacacaacagagacagaaagaagagagatgatacttgtacgatccagtttggaattggactacattaattacattagggatgaatgaatgtaattgtaaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0638200, RefSeq:Os12g0638200