Os12g0638500

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Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0638500| Description = Conserved hypothetical protein| Version = NM_001190151.1 GI:297729432 GeneID:9266094| Length = 2210 bp| Definition ...")
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Gene Name

Os12g0638500

Description

Conserved hypothetical protein

Version

NM_001190151.1 GI:297729432 GeneID:9266094

Length

2210 bp

Definition

Oryza sativa Japonica Group Os12g0638500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27601695..27603904

Sequence Coding Region

27601884..27603728

Expression

GEO Profiles:Os12g0638500

Genome Context

<gbrowseImage1> name=NC_008405:27601695..27603904 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27601695..27603904 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaatgacgatgacaaggctacgccacaccaccaggacagcgctaccaccatctccaagtccaacaagcgcgagcgcaagaagagcaaatatctgtcgccgccctacaccaacttgggcgggattgcccttgtccagaaggcgtctgattcgccaaagccatcgccacccgctgccgctgaagatgatgaatacaaggtattgccaaagccattgcaggagaatgtttctccacaagaggtcttgctttttgtgcgcaggactgggctggacgtcttccataggatacggtcaatgaaggccgtccatgccttcctttctttgtatacaagttcattgttggtcgaggatgctgactacaagtcctttatagcacacgagtgttctacggagaatgcttttacaaatgctgctgtggagacatctgattcttttgtaaattcacgtgctgctctgaaaccaggcaagtgtgctttgaagaggaccagaaaacaggggcaaaatgagggtgggagttcttcgaccaagaccgagaagagggggaagaaatctcctgcggctgccctaggctgtggtgtaacaattacccctgctattcctatcaggcaagcgagggcagaagacataagaagcccgacgaaaccagagaatggtgcaaggggtatggcagttggtgtgcagcttgagaagatcaagccagactttaagagccctacattagcttcagcgaaggtagcaaaagaaccaggacaggagcaggacaaagcaaatggtggatctgttttgaagaccccagccaatgcttgcaagaatttatctgaccaacctgcaaaacagaatgatgcaggtatgctggaagcaagacagttgcataccaacattcaagcagatccaggtgtgcaaggcattgtagtagatgtgcctgtcagatgtgttccggtggaagcagtgaagtctgaagctaatattcctctacacagagatgggcagaatgctgctgtagatgtgactgacaaaagtgcacctcttcctaaaagtgaagacgtatccctatctcagccgacagatggaaataaagaacatgcaagcgccgaagtgcgtacggtccaagaatcttatgcttcccttgaagcgatggtgccggaaatgcttatgaaagcggaggtcgccaatggcactaatgtagcagcagcaagcaattccctcaaagatgagggccagagggccgatcagcctagcctgaagaagatggttcctggagctaatgtaaaccattcctctggtgaagctaccaatagtgctttccctgatatagcttattctactcctaagaaaaagaagaagaaaattgcagagcactttggaaacccagcagcccttcttttggactttgcaaagggtgttgttctgccctccaaagaggaattgctctctgcatttggtaagtttggtctcgtgattgagtctgagacggacatcgtaaaagatacccatagcgctcgtgttgtgtttgggaaaagtgctgaagctgaggcggcttacaacagcgcagaaactcttggtatgtttggtcccccgtttgctacaccaaggcttcattatcttcctccaatcaagttgagcgtgccttcgccagcttcaaagcctccccttacggatattaggaaaaacctggagaggatgatctcatccctggctggccattcatctgtcaagaaggcaactccatcagatggatcaaagcaaatgccagaaaaccttcttggggaaatgcaggggcttttggcaaaagttgacaagatgctcaccgggccttctgctactgctagtaatcctcattag</cdnaseq>

Protein Sequence

<aaseq>MDNDDDKATPHHQDSATTISKSNKRERKKSKYLSPPYTNLGGIA LVQKASDSPKPSPPAAAEDDEYKVLPKPLQENVSPQEVLLFVRRTGLDVFHRIRSMKA VHAFLSLYTSSLLVEDADYKSFIAHECSTENAFTNAAVETSDSFVNSRAALKPGKCAL KRTRKQGQNEGGSSSTKTEKRGKKSPAAALGCGVTITPAIPIRQARAEDIRSPTKPEN GARGMAVGVQLEKIKPDFKSPTLASAKVAKEPGQEQDKANGGSVLKTPANACKNLSDQ PAKQNDAGMLEARQLHTNIQADPGVQGIVVDVPVRCVPVEAVKSEANIPLHRDGQNAA VDVTDKSAPLPKSEDVSLSQPTDGNKEHASAEVRTVQESYASLEAMVPEMLMKAEVAN GTNVAAASNSLKDEGQRADQPSLKKMVPGANVNHSSGEATNSAFPDIAYSTPKKKKKK IAEHFGNPAALLLDFAKGVVLPSKEELLSAFGKFGLVIESETDIVKDTHSARVVFGKS AEAEAAYNSAETLGMFGPPFATPRLHYLPPIKLSVPSPASKPPLTDIRKNLERMISSL AGHSSVKKATPSDGSKQMPENLLGEMQGLLAKVDKMLTGPSATASNPH</aaseq>

Gene Sequence

<dnaseqindica>190..2034#gtcgccgccctcgccaacggatggggtcccgctggcccgggccactacccgcgccgccccgtcgccgacctggtcgacaagattgacctcgatgtgcccgccgcctgggatgcccaggaccaggacaccaggccattcgaggtgccgcaggagacacccacccaaaagaagcgcagcgtcgccgagctcatggacaatgacgatgacaaggctacgccacaccaccaggacagcgctaccaccatctccaagtccaacaagcgcgagcgcaagaagagcaaatatctgtcgccgccctacaccaacttgggcgggattgcccttgtccagaaggcgtctgattcgccaaagccatcgccacccgctgccgctgaagatgatgaatacaaggtattgccaaagccattgcaggagaatgtttctccacaagaggtcttgctttttgtgcgcaggactgggctggacgtcttccataggatacggtcaatgaaggccgtccatgccttcctttctttgtatacaagttcattgttggtcgaggatgctgactacaagtcctttatagcacacgagtgttctacggagaatgcttttacaaatgctgctgtggagacatctgattcttttgtaaattcacgtgctgctctgaaaccaggcaagtgtgctttgaagaggaccagaaaacaggggcaaaatgagggtgggagttcttcgaccaagaccgagaagagggggaagaaatctcctgcggctgccctaggctgtggtgtaacaattacccctgctattcctatcaggcaagcgagggcagaagacataagaagcccgacgaaaccagagaatggtgcaaggggtatggcagttggtgtgcagcttgagaagatcaagccagactttaagagccctacattagcttcagcgaaggtagcaaaagaaccaggacaggagcaggacaaagcaaatggtggatctgttttgaagaccccagccaatgcttgcaagaatttatctgaccaacctgcaaaacagaatgatgcaggtatgctggaagcaagacagttgcataccaacattcaagcagatccaggtgtgcaaggcattgtagtagatgtgcctgtcagatgtgttccggtggaagcagtgaagtctgaagctaatattcctctacacagagatgggcagaatgctgctgtagatgtgactgacaaaagtgcacctcttcctaaaagtgaagacgtatccctatctcagccgacagatggaaataaagaacatgcaagcgccgaagtgcgtacggtccaagaatcttatgcttcccttgaagcgatggtgccggaaatgcttatgaaagcggaggtcgccaatggcactaatgtagcagcagcaagcaattccctcaaagatgagggccagagggccgatcagcctagcctgaagaagatggttcctggagctaatgtaaaccattcctctggtgaagctaccaatagtgctttccctgatatagcttattctactcctaagaaaaagaagaagaaaattgcagagcactttggaaacccagcagcccttcttttggactttgcaaagggtgttgttctgccctccaaagaggaattgctctctgcatttggtaagtttggtctcgtgattgagtctgagacggacatcgtaaaagatacccatagcgctcgtgttgtgtttgggaaaagtgctgaagctgaggcggcttacaacagcgcagaaactcttggtatgtttggtcccccgtttgctacaccaaggcttcattatcttcctccaatcaagttgagcgtgccttcgccagcttcaaagcctccccttacggatattaggaaaaacctggagaggatgatctcatccctggctggccattcatctgtcaagaaggcaactccatcagatggatcaaagcaaatgccagaaaaccttcttggggaaatgcaggggcttttggcaaaagttgacaagatgctcaccgggccttctgctactgctagtaatcctcattagccccctaccgcatggattattctaatccatccgtagttagatgtcttattgtctatgctgtttgtcgctgtcatcaattatagctgccaatctcgagctaatgataaattagatgttttgacgatttcggcagcaacgattgaaactattgtgaatggtagtccgtagccgttatt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0638500, RefSeq:Os12g0638500