Os12g0638600

From RiceWiki
Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0638600| Description = Conserved hypothetical protein| Version = NM_001073913.1 GI:115489787 GeneID:4352909| Length = 3631 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0638600

Description

Conserved hypothetical protein

Version

NM_001073913.1 GI:115489787 GeneID:4352909

Length

3631 bp

Definition

Oryza sativa Japonica Group Os12g0638600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27605292..27608922

Sequence Coding Region

27605518..27605606,27605694..27605892,27605989..27606102,27606266..27606348,27606435..27606816
,27607015..27607476,27607553..27607873,27608511..27608828

Expression

GEO Profiles:Os12g0638600

Genome Context

<gbrowseImage1> name=NC_008405:27605292..27608922 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27605292..27608922 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaagccgtgcgggtggacctcgacaagctccccatcaagcgcctccacgccatcgacgaggccggcaacgagcactacccgcccgacaccagcagcgaggagcagcgcctctccgccatccgccgcatcgacttctcctgggtcatcgacaaggacgccaagaagcccaagaaggacaccgcccagcagcagcagcagcaggcatggccgtggcagggcatgatggagagcctgcagcaggcgcagcaggagctctccgtcgtcattgacctcatctccactgtcgaagccaatgatgcagtggcagtcgctgggatgctcaagcccaaatcgctgccaaccgaaaccttagttgacaccgcagtctctgcagccaccaagcttcagcgcgttcggcatttgtcacgctacttcaaacaatctgccaaaacaatggagcagcagttccaaaaagagtctaggttctatggctcattaatcagattgcagcagaactggaaagtgaagcggcaacggtttggtggaagtggtccaggaagtgagggcttcatgtttgatctgatcgacacttctcaattggacacagcagcaatgcctcgactgtcatcattaccattgattccaattgaccaagactcatcaggcactttgtccgtacaagtccctcaaaaatcttgccgtttcttgagtcttaattttcgaggggacagtgccaatggtgtggaaaactacggtcataaactgaaagatggcatctcaagcatcacttcctctgaaacagacaatgatgatgtcaataaatccatcaaacatgcacattctattcttcgcaacatccacaagtcaatatttgaggagcaggtatttgatatggtgatccgtgagacatttgtccaatctcaaggcatcaatgtgactggaatgcgtgaagattttctccaattagctattggtcaggaatgttcattgtgcctctcgcttgctcattctggagatggtagtgactcagaaatggtagaccatgaagaccatgccaattcagaggatgcctcaaatcttgtgttggtcactatgaatgggaagctggaccctttaagaaaagacgtgacagggtttcctaatcccagaagtctggaaatttacttgctacaattgtttcatgagaacattcttaggaaggtcagggagaaatcccttaacattggtcgctaccaaagtcctgctcaggttgcaggtgatgattatggcctgctaggtcatttctgcttgacagtggctcacaggatattttctaacaaagtactcgtggagcttgagagtgtggtcagcagggttccatatctccatttgcgttctcttcctacttggcattctcgaacttcctcctggtctctatgcttgaaagttcctcagcctatccttgctgcagatcggattgcaaagccttctgataaccatgaacttaagtacaaatccaggtcacagttcaatactaaggtgatcgtgaaagatagccaaattagtctaatgggtgaaggctccccaagcattgctggatcattgactgggaagccctccgatggatatttggtaaatagctacaattgtgacttggaggacctcccaacaatgcttctgcagcaggttgctagtcaagtaatccactggcttcatgaagaagcattggttctcggtatgaatgtgactagagatttcctgtgcctttactttgatcttgagcaaggtgaaacgcttggcctggtggcgaatgttgacccggacgacacctgtggatgcatttcttggtaccttactattgatcacccaacggaggatgggaagatgtcagcagatagtcaggagtttgagaagcgtaggtttttgggctatgtttctcttgaagtattgtactctacccttatggacctgataaatttgtgtaacgctggcgcccaccactga</cdnaseq>

Protein Sequence

<aaseq>MEEAVRVDLDKLPIKRLHAIDEAGNEHYPPDTSSEEQRLSAIRR IDFSWVIDKDAKKPKKDTAQQQQQQAWPWQGMMESLQQAQQELSVVIDLISTVEANDA VAVAGMLKPKSLPTETLVDTAVSAATKLQRVRHLSRYFKQSAKTMEQQFQKESRFYGS LIRLQQNWKVKRQRFGGSGPGSEGFMFDLIDTSQLDTAAMPRLSSLPLIPIDQDSSGT LSVQVPQKSCRFLSLNFRGDSANGVENYGHKLKDGISSITSSETDNDDVNKSIKHAHS ILRNIHKSIFEEQVFDMVIRETFVQSQGINVTGMREDFLQLAIGQECSLCLSLAHSGD GSDSEMVDHEDHANSEDASNLVLVTMNGKLDPLRKDVTGFPNPRSLEIYLLQLFHENI LRKVREKSLNIGRYQSPAQVAGDDYGLLGHFCLTVAHRIFSNKVLVELESVVSRVPYL HLRSLPTWHSRTSSWSLCLKVPQPILAADRIAKPSDNHELKYKSRSQFNTKVIVKDSQ ISLMGEGSPSIAGSLTGKPSDGYLVNSYNCDLEDLPTMLLQQVASQVIHWLHEEALVL GMNVTRDFLCLYFDLEQGETLGLVANVDPDDTCGCISWYLTIDHPTEDGKMSADSQEF EKRRFLGYVSLEVLYSTLMDLINLCNAGAHH</aaseq>

Gene Sequence

<dnaseqindica>227..315#403..601#698..811#975..1057#1144..1525#1724..2185#2262..2582#3220..3537#aaagtccagcacccaaactcgatcgagaattcgctcctcctcactccgccgcccgacgacctcgccggcggccgcccccaccccgccggccgccgcttctgcttcccgcggggggatcccttccgctcttgagcgggactcgtgagccccaaggcagtgcctccttcactcaaaaaattgtctccgatctaattaagccctccgccgccgctgcctcgccttcgccatggaggaagccgtgcgggtggacctcgacaagctccccatcaagcgcctccacgccatcgacgaggccggcaacgagcactacccgccgtaagcaccaaaccaaaccaacctcttcccttcccctgaaaccctaacccccacctctctccgttcactgagattcggattccgcagcgacaccagcagcgaggagcagcgcctctccgccatccgccgcatcgacttctcctgggtcatcgacaaggacgccaagaagcccaagaaggacaccgcccagcagcagcagcagcaggcatggccgtggcagggcatgatggagagcctgcagcaggcgcagcaggagctctccgtcgtcattgacctcatctccactgtcagttttcccacacacaatactgcaaaccccattctatttgcatgcgattgtttgtattcctgacagaggagacaatcctacttgataatgcaggtcgaagccaatgatgcagtggcagtcgctgggatgctcaagcccaaatcgctgccaaccgaaaccttagttgacaccgcagtctctgcagccaccaagcttcagcgcgttcgggtatgtcaccctactgcctatgtttgattacttcaattcacggctaaggaacaaaatggaacctaaaacaaactcaatttgtttctgtaatcgcttgccactttcctcttccgtcttgcatctatcatgcttcctgttgtgatcttcatttgtgtcctcgcagcatttgtcacgctacttcaaacaatctgccaaaacaatggagcagcagttccaaaaagagtctaggttctatggctcattaatcaggcatgtcttgttgcttaacttgagttgttatttcaataccacttcacccaagtttgcaccatgaattactcgcggattggtggcagattgcagcagaactggaaagtgaagcggcaacggtttggtggaagtggtccaggaagtgagggcttcatgtttgatctgatcgacacttctcaattggacacagcagcaatgcctcgactgtcatcattaccattgattccaattgaccaagactcatcaggcactttgtccgtacaagtccctcaaaaatcttgccgtttcttgagtcttaattttcgaggggacagtgccaatggtgtggaaaactacggtcataaactgaaagatggcatctcaagcatcacttcctctgaaacagacaatgatgatgtcaataaatccatcaaacatgcacattctattcttcgcaacatccacaagtcaatatttgaggagcaggtcagctaagtgtttgcttggcatgctaagaattcctgtatagaatgctcttaattaagttttaactatagcatcatggaaaattattgtatatcatgtgatgacatcttgcaccaccaccacccctccctccccgggtttatcattatttatttatgtatatcgttctgtggcttagcttagtgtatgcctttgtaggtatttgatatggtgatccgtgagacatttgtccaatctcaaggcatcaatgtgactggaatgcgtgaagattttctccaattagctattggtcaggaatgttcattgtgcctctcgcttgctcattctggagatggtagtgactcagaaatggtagaccatgaagaccatgccaattcagaggatgcctcaaatcttgtgttggtcactatgaatgggaagctggaccctttaagaaaagacgtgacagggtttcctaatcccagaagtctggaaatttacttgctacaattgtttcatgagaacattcttaggaaggtcagggagaaatcccttaacattggtcgctaccaaagtcctgctcaggttgcaggtgatgattatggcctgctaggtcatttctgcttgacagtggctcacaggatattttctaacaaagtactcgtggagcttgagagtgtggtatagctcctataagcttgttgatgctacatatttgcatgtagatcattatttaaatttcctttctgtattgcaggtcagcagggttccatatctccatttgcgttctcttcctacttggcattctcgaacttcctcctggtctctatgcttgaaagttcctcagcctatccttgctgcagatcggattgcaaagccttctgataaccatgaacttaagtacaaatccaggtcacagttcaatactaaggtgatcgtgaaagatagccaaattagtctaatgggtgaaggctccccaagcattgctggatcattgactgggaagccctccgatggatatttggtaaatagctacaattgtgacttggaggacctcccaacaatgcttctgcagcaggtaaacttctgatgatactatttaaattatttcttggtagatcatgtttatgaaattattaaagttattaccattggaattcattatggtccattgataatgcaatgagccagactatttcttgcattgcaaatgtgtaacataaactccttgcatttgaatgtgaaatgcacaatggtaatgcatttttcttagtttttttccctgaggaaatcttcatttgtgcctattgacctacaggattagtttgcttaacagttcaaaatgaatgtggcatgcatgttgagttgaacaggacaccagtacaaacattctagtgccttgccatgcttccacatttttttaggttaatattgtcccacataagaggtctggaaggcagtggccattcatgtaatataaaactgaaagcactgaatacagtgcgagaaagggagcaagatgtttatgctttgatagacctgtcattgttcaactttggttgtcttgatgggctatttaatttaatccaagtggatcatcataaggatttgtttccaagtaatactgtgctgcccatgaatattacccatgtcacaacaattgctttttaagtctattttgtcagaatgatgtgctcactgttttttctgttcaggttgctagtcaagtaatccactggcttcatgaagaagcattggttctcggtatgaatgtgactagagatttcctgtgcctttactttgatcttgagcaaggtgaaacgcttggcctggtggcgaatgttgacccggacgacacctgtggatgcatttcttggtaccttactattgatcacccaacggaggatgggaagatgtcagcagatagtcaggagtttgagaagcgtaggtttttgggctatgtttctcttgaagtattgtactctacccttatggacctgataaatttgtgtaacgctggcgcccaccactgacatctatctgaatatccatgtaatatcacttactaccttgtagattggtcctttgcttaggcgaatggaatcctgttggctgttgcccgctatc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0638600, RefSeq:Os12g0638600