Os12g0638700

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Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0638700| Description = Plasma membrane H+ ATPase (EC 3.6.3.6)| Version = NM_001073914.1 GI:115489789 GeneID:4352910| Length = 6489 bp| Def...")
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Gene Name

Os12g0638700

Description

Plasma membrane H+ ATPase (EC 3.6.3.6)

Version

NM_001073914.1 GI:115489789 GeneID:4352910

Length

6489 bp

Definition

Oryza sativa Japonica Group Os12g0638700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27613679..27620167

Sequence Coding Region

27613738..27613791,27614312..27614431,27614527..27614625,27614732..27614869,27614974..27615108
,27615192..27615371,27615459..27615665,27615742..27615861,27615936..27616055
,27616146..27616268,27616401..27616505,27616706..27616850,27617294..27617458
,27617555..27617793,27617880..27617912,27618221..27618302,27618427..27618587
,27618749..27618934,27619027..27619209,27619296..27619474,27619713..27619809

Expression

GEO Profiles:Os12g0638700

Genome Context

<gbrowseImage1> name=NC_008405:27613679..27620167 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27613679..27620167 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgagaaggagggcaacctcgacgccgtcctcaaggaggccgtcgacttggagaatattcccctcgaggaagtgtttgagaacctgagatgcagccgcgagggtctcacaactcagcaggcgcagcagcgcctcgaaatctttggccccaacaagcttgaggagaaggaggagagcaagttcctcaagtttttggggttcatgtggaatccactctcatgggtcatggaagctgcagctatcatggccattgcgctggcgaatggaggggggaagccaccggattggcaggactttgttggtatcataactcttcttgttatcaactcgacaatcagtttcattgaggaaaacaatgctggcaatgctgctgctgcactcatggcccgtcttgcaccaaaggccaaggtgcttcgtgatggccgatggactgaggaagaggcggccatccttgtaccaggggatatcgtaagtattaaacttggagacattatacctgcagatgcgcgtctccttgagggagatcctttgaagatcgatcagtctgccctgactggagaatcattgcctgtcaccaaaggtcctggtgatggtgtctattctggttcgactgtcaagcaaggtgagatcgaagccatagtgattgctactggtgttcacactttcttcggaaaagcagcacaccttgttgactcaactaaccaagttggtcatttccagaaggtcctgacggctattgggaatttctgcatttgctcaattgctgtgggaatgtttgttgagatcattgtaatgtaccctatccagcacagggcataccgccccgggattgacaacctccttgtccttctcattggaggcattcccatagccatgccaacagtcttatctgtgactatggcaattgggtcacaccgcttgtctcaacagggagcgatcacaaagagaatgactgcaattgaggagatggcgggcatggatgttctttgcagtgataaaactggaactttgaccttgaataagctcaccgtggacaagaacctcattgatgtctttgaaagaggaatcactcaggaccaagtgattctcatggctgctagagcatcacgaacagaaaaccaggatgctattgatactgcaatagttgggatgctagctgatccaaaagaggcccgtgctggtattcaagaagttcatttcctgccattcaatcctactgacaaaagaacagcattgacatacattgatggtgatggcaaaatgtatcgtgttagtaagggtgcacctgagcagattctccaccttgctcataacaaaccggagatagagcggagggtccatgctgtgattgacaaatttgcagaacgtggacttagatcgcttgctgtagcataccaggaagtaccagaggggacgaaagaaagccctggtggcccatggcattttgttggtctcatgccactttttgatcctccaaggcacgacagtgctgaaacaattcggcgggcacttaatcttggtgtcaatgtcaagatgatcacaggtgatcagctggcaattggaaaagaaacagggcgtcgcctgggaatgggtacaaacatgtacccttcatccgctttgctgggacagaacaaggatgagtccattgccgctttaccagttgatgatctcattgagaaagctgatggctttgctggtgtattcccagagcacaagtatgagattgtgaaacgtctgcaagcaagaaagcacatatgtggaatgactggtgatggtgtcaatgatgctccagccctaaagaaagctgacattggtattgctgttgctgatgcaactgatgcagccaggagtgcttcagatattgtgctcacagaacctggtcttagtgtgatcatcagtgctgtgcttacaagtcgtgcaattttccagcgtatgaagaactacactatctatgctgtctcaatcaccattcgtatagtgcttggatttatgctacttgcgctcatctggaaattcgatttccccccttttatggtcctaatcatagcaattctaaatgatggtaccatcatgactatatcaaaggatcgggtaaaaccatctccactacctgacagctggaagctggctgagatttttacaactggagttgtcctcggtggatacttggcaatgatgacagtaatcttcttctgggctgcatataagacagactttttcccgagaatatttcatgttgaaagccttgagaagacagctcaagatgatttccaaaaacttgcctctgctgtttacctccaagttagcaccatcagccaagctctcatctttgtcacaaggtcccgcagctggtcatttgttgagcgccctggatttctgctggtctttgctttcttggttgcacagctgattgctacactgattgctgtgtatgctgactgggcgttcacctcaatcaaaggcattgggtggggttgggctggtattgtgtggctctacaatctaatcttctacttcccactcgacattatcaagttcctcatcagatatgctttgagtgggaaagcatgggatcttgtcattgagcaaaggatcgctttcacaaggaagaaggactttggtaaggaggagagggagctcaagtgggcacatgctcagaggaccctccatggactgcagccgcctgatgccaagatgttctcggagaaggctggctacaatgagctcaatcagatggctgaagaggcgaagaggagggcggagattgccaggcttagggagctccatacgctcaaggggcatgtagaatcggttgtgaagctcaaaggcctcgacattgagaccatccagcagtcttacaccgtgtga</cdnaseq>

Protein Sequence

<aaseq>MAEKEGNLDAVLKEAVDLENIPLEEVFENLRCSREGLTTQQAQQ RLEIFGPNKLEEKEESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVG IITLLVINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWTEEEAAILVPGDIVSI KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTVKQGEIEAIVIAT GVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMFVEIIVMYPIQHRAYRP GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK TGTLTLNKLTVDKNLIDVFERGITQDQVILMAARASRTENQDAIDTAIVGMLADPKEA RAGIQEVHFLPFNPTDKRTALTYIDGDGKMYRVSKGAPEQILHLAHNKPEIERRVHAV IDKFAERGLRSLAVAYQEVPEGTKESPGGPWHFVGLMPLFDPPRHDSAETIRRALNLG VNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIAALPVDDLIEKADGFA GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL TEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLI IAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGGYLAMMTVIFFWAAYKTDF FPRIFHVESLEKTAQDDFQKLASAVYLQVSTISQALIFVTRSRSWSFVERPGFLLVFA FLVAQLIATLIAVYADWAFTSIKGIGWGWAGIVWLYNLIFYFPLDIIKFLIRYALSGK AWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLQPPDAKMFSEKAGYNELNQMA EEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQSYTV</aaseq>

Gene Sequence

<dnaseqindica>60..113#634..753#849..947#1054..1191#1296..1430#1514..1693#1781..1987#2064..2183#2258..2377#2468..2590#2723..2827#3028..3172#3616..3780#3877..4115#4202..4234#4543..4624#4749..4909#5071..5256#5349..5531#5618..5796#6035..6131#gatacaggtagagagaggtgagaaggcagtggtgggagatccatctgcgaggtgcctccatggctgagaaggagggcaacctcgacgccgtcctcaaggaggccgtcgacttggtaaggaactcactctcaactctctactctctactccggcggcgccaaaatcttgcgtctttgtgctctcttttccgttcttttactagattggtgctccttcctgttccgcggaattcgggcatgtgctcctggtttcttgggttgcaatcactcacgagtttcctgttttcttggcgtttcttgtgactggctagcgtttctttagcaccctgcatggctgccgttctttctttccctttttcgttctgtgagaattcgtttatttgctcttgtaaatctgggtttctgcggttcgttctgccaaataattccatggtggcgacattggcatctccagctccagccttgtttgcttctggctcagccgttctcgaaatagtagttgtagtggcaatggctgcatgcattaataggtgacggctgacaattcggtgggcgggctgatgcttcttgtgtttccgttttcgtccatggagttggattggtgaattcttgtttgtttgtttttttcctgcaggagaatattcccctcgaggaagtgtttgagaacctgagatgcagccgcgagggtctcacaactcagcaggcgcagcagcgcctcgaaatctttggccccaacaagcttgaggagaaggaggtttgctttgttccttatctactgtttcagaaaaaaatgcatctgagatgtctgaaaatgcttaagagttgggactttgatggtggcactggcaggagagcaagttcctcaagtttttggggttcatgtggaatccactctcatgggtcatggaagctgcagctatcatggccattgcgctggcgaatggaggggtaaggcagttagatatctgagccaattccgattttgcctagcttgttggttagaattcaggagttgattacataacacatttgttgtcttgtgttgtatcatcaggggaagccaccggattggcaggactttgttggtatcataactcttcttgttatcaactcgacaatcagtttcattgaggaaaacaatgctggcaatgctgctgctgcactcatggcccgtcttgcaccaaaggccaaggttttaccttttatgctgttcactatgttctcaaggcaggtttcatgtgcctgtaaggcccattcacaattctgaatccatgagacatattttgtgttcttcaggtgcttcgtgatggccgatggactgaggaagaggcggccatccttgtaccaggggatatcgtaagtattaaacttggagacattatacctgcagatgcgcgtctccttgagggagatcctttgaagatcgatcaggttcttcccattgctcgacttaaagttgccttcaccttttgatgatccatcaaggcttctcctcactatctctcatgttgtagtctgccctgactggagaatcattgcctgtcaccaaaggtcctggtgatggtgtctattctggttcgactgtcaagcaaggtgagatcgaagccatagtgattgctactggtgttcacactttcttcggaaaagcagcacaccttgttgactcaactaaccaagttggtcatttccagaaggttagtttgaaatgctcacctcacatgtgtgtattcttcatcaaactatcatggtaattcactcatattattatctgattatcgcaggtcctgacggctattgggaatttctgcatttgctcaattgctgtgggaatgtttgttgagatcattgtaatgtaccctatccagcacagggcataccgccccgggattgacaacctccttgtccttctcattggaggcattcccatagccatgccaacagtcttatctgtgactatggcaattgggtcacaccgcttgtctcaacaggtttgcatctgttgctttatgtatgtcacttttcagttttggtttgtataatgtgctaaccacttaaaatattcagggagcgatcacaaagagaatgactgcaattgaggagatggcgggcatggatgttctttgcagtgataaaactggaactttgaccttgaataagctcaccgtggacaagaacctcattgatgtgagaaaaaacaaatctctattctattaacactttcatgtctaggttaaaaagcatcaaatttgttaatccaggtctttgaaagaggaatcactcaggaccaagtgattctcatggctgctagagcatcacgaacagaaaaccaggatgctattgatactgcaatagttgggatgctagctgatccaaaagaggtatattgctttgtcgaaggtttttgaaatggtggctgatatcaccttggttatgttgtgaaatgactatttgcctacattttaacacaggcccgtgctggtattcaagaagttcatttcctgccattcaatcctactgacaaaagaacagcattgacatacattgatggtgatggcaaaatgtatcgtgttagtaagggtgcacctgagcaggtatggggagaatgaactgctttttttttcagctattcatatcttagctgctttatgagagacagcattataatcagacttgaattttgtggcatagaatgttatgatgtaaactcaaataattgactgcagattctccaccttgctcataacaaaccggagatagagcggagggtccatgctgtgattgacaaatttgcagaacgtggacttagatcgcttgctgtagcataccaggtgagaagggttacagtacaccatctatcataacctgattttcactgtgcagcagcgatggtatcatttcatgaacaggtttaaagtaattgtagattttagtaactaccaagtcttgtccatgcaaaccatgactttcctctttcactgtttactgcgtacgttatcttagtggtgtgttactctgttgttgaatgtaggaagtaccagaggggacgaaagaaagccctggtggcccatggcattttgttggtctcatgccactttttgatcctccaaggcacgacagtgctgaaacaattcggcgggcacttaatcttggtgtcaatgtcaagatgatcacaggtgcatgctcaaatattctgtattgtcagttttttttcaggcttatgcaggaatacagaattctggagactcgatttatacaatcaactttaaacaaaaaaaagaaaaggaaaataggattcacatgagaaccaaatagtacaatgtaagaacatggtcgtgagcacccagacctcaccaggaaattctgttctgctgttagctggccagatttttcaaccctagttctgtgctttccatgggatgatccaaattatccgtttgtctgtttggtcactttatttttacagtgaacatggttttgatgcagtcctattgataaatagaacataactcagattaaaaatagtatatttcctggaggtagccgttttcattacattcaaaagactgctatttgcgttcttttgtcctagtttattaattggtctcctaatgttcaggtgatcagctggcaattggaaaagaaacagggcgtcgcctgggaatgggtacaaacatgtacccttcatccgctttgctgggacagaacaaggatgagtccattgccgctttaccagttgatgatctcattgagaaagctgatggctttgctggtgtattcccaggtatggtgataaggagttattacactgcaaagattgagagttgggaaagatgaattgtttaattctaagttaactgagtgaatggcttttgtccagagcacaagtatgagattgtgaaacgtctgcaagcaagaaagcacatatgtggaatgactggtgatggtgtcaatgatgctccagccctaaagaaagctgacattggtattgctgttgctgatgcaactgatgcagccaggagtgcttcagatattgtgctcacagaacctggtcttagtgtgatcatcagtgctgtgcttacaagtcgtgcaattttccagcgtatgaagaactacactgtatgttaaagcggaatagtgttcaagtactcttttatatgtttattcccctaatttatctttctaatgcattttcatgttggcagatctatgctgtctcaatcaccattcgtatagtggtatgtttatcttgcttttacttctgaatgaaaacttttatatccatgcattttttaattatgtgatttaatgtgttggtatcaagctgcatcaagtctctgtatttatttatttatttgaacaattatccttgatgcgactgctagggattatttttttatgttattcagatcaagttacaaatactacgagatttcaatccataactgtccgctatgatatatatccatcttgaacactgaattgtgccagtgttctctatttgtgttacttctgagggattaattcactttgttaatttcaacagcttggatttatgctacttgcgctcatctggaaattcgatttccccccttttatggtcctaatcatagcaattctaaatgatggtaaatctctctctctctcacacacacacaccggcacacaaccactgcacatgttcacacttgctttttgacaatagaaattatgagcatataaagatattcaactatgtactgtgatcgataggtaccatcatgactatatcaaaggatcgggtaaaaccatctccactacctgacagctggaagctggctgagatttttacaactggagttgtcctcggtggatacttggcaatgatgacagtaatcttcttctgggctgcatataagacagactttttcccggtaaggagcactgtgttgagacttgagacatttgtttgtgatgatttttaagccagctatgcaagtattcttggctactaacgatggttaaattgttagtgaactacttttaggaccttatttgctttactcgctgaagcttattgtttataaaatttcagagaatatttcatgttgaaagccttgagaagacagctcaagatgatttccaaaaacttgcctctgctgtttacctccaagttagcaccatcagccaagctctcatctttgtcacaaggtcccgcagctggtcatttgttgagcgccctggatttctgctggtctttgctttcttggttgcacagctggtctgctcctactctctcactgtctccctcttatattttgcttcaggagttaaagccgcattgacgtaaacttttggtttaaacaaatacagattgctacactgattgctgtgtatgctgactgggcgttcacctcaatcaaaggcattgggtggggttgggctggtattgtgtggctctacaatctaatcttctacttcccactcgacattatcaagttcctcatcagatatgctttgagtgggaaagcatgggatcttgtcattgagcaaagggtaattaataatgcatgctacacaactgtcttggcccctcacacctattaagtttctgattctcactaatgtttgtctacctgcagatcgctttcacaaggaagaaggactttggtaaggaggagagggagctcaagtgggcacatgctcagaggaccctccatggactgcagccgcctgatgccaagatgttctcggagaaggctggctacaatgagctcaatcagatggctgaagaggcgaagaggagggcggagattgccaggtaggaggaccacactacacttgcaaaacatcatgctttcttgcgtatacgatttcttggatcctttagtattgttccacctgtccctttctccatcagtgcattgttactcatgaatccatttttgaatatgaaaagtagtatctttttttggcgccaataggcaggcaacagttacattgaacatataagttggttgataacgatgtgaagctaactttgggatgatttgttacaggcttagggagctccatacgctcaaggggcatgtagaatcggttgtgaagctcaaaggcctcgacattgagaccatccagcagtcttacaccgtgtgatccagcctgtccataaagaaagaaaaaagaggattattttttttccagattttcctgtttcgctttaacttgactgcaattctgcaatcacctacgtgtacttgaaccgaattgctgtaatctttgtccctcctgctccagctttctactacatggtagtgttatataatttttggtcacctgaaaatatataagtgtttgaggtgaagcacaatggcaatgccagagtttttttgctcggttactgagaagcatgttttcataatcaatcggtcaattgtatggacatattatagatgaatttggtaactgtttgtgtgggggcagctggcagtatgtaacatgtgggcttcaatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0638700, RefSeq:Os12g0638700