BGIOSGA015602

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Revision as of 04:16, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015602| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015602, complete gene.| tag = OS04G02...")
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Gene Name

BGIOSGA015602

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015602, complete gene.

LocusTag

OS04G0201800

Ensembl Transcript ID

BGIOSGA015602-TA

Ensembl Protein ID

BGIOSGA015602-PA

Length

8059

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:3975005..3983063

Sequence Coding Region

3982831..3983063,3981087..3981448),complement(3978491..3978705,3978369..3978392),complement(3977764..3977986
,3977280..3977499),complement(3977055..3977190,3975947..3976009),complement(3975005..3975100

Genome Context

<gbrowseImage1> name=IndicaChromosome04:3975005..3983063 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:3975005..3983063 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAATTCGGTGTCGGACCGGAGCTTCCTCATCGACAGCGACGAGGAGGACGACGCCGCCGCCGCCGTCGAGGATGGGAAGCGTCGCGGCCACGGCGGCGATGAGTCGGACGACGGGTCGGACTCGTCGTCGTCGTGCGGTACCCCGCGGGTCGCCGCCGCCGGCGGCGGCGGCCGCGGCCGCGGCAGCCAGCCCAGCTCCTACACGCAGCAGTGGCCTCAGAGCTACAGGCAGTCGATTGACATGTACAGTAGCGTGCAATCCCCGAACCTGAGCTTCCTGGGCACTCCGACGCTGAGCCGTCTATCAAACTCATTCCTGACTGCCTCGTTCCGGGGAAAGCCGCCGGAGATCATCTCCGGGCTCATCAAGCCACTGCTGCCGACGACGGCAGCGGCGGCGGCGGCCGACGACGAAGGTGACCGCCGGCAACAGCAGCACGAAGATGGCCGGAAGAGCTCGCAGTACCTCCTGCCGCCGAGGAGGCCGTCGTCTCTGCAGAAGATCCCCGAGGACCAGAAGCCGCTCGTGGTTGGACACCACGAGGTTGGGCCCTACCGGCAGTGCACCTACACTCAGGGCGTCTTGAACGGAGTGAATGTCCTGTGTGGTGTGGGGGTCCTATCAACGCCTTATGCTGTCAAGCAAGGTGGCTGGCTTGGGCTGATTATATTGGCTCTGTTGGCTGTGTTGGCATGGTACACCGGCATCCTGCTGAAACGCTGCCTGGACAGCAAGGAAGGCCTTGAGACCTACCCGGACATTGGCCACGCAGCTTTCGGCACCACTGGTCGCATCGTCATCTCGGTAATTCTATACATGGAACTGTTTAATATTGGCAACATATTCATTGGTCCTAATGTTTCTCTACAGGCCTGTTGCATTGAGTATCTGATATTAGAGAGTGATAATTTGTCAAAGTTGTTCCCCAATGCACACCTGATCATTGGGACATGTACAATAAATGCGCATATATTATTCGCAATCCTGACTACTCTGATTGTCATGCCAACAACTTGGCTTCGCGATCTCAGCTGTCTAAGCTTCATTTCAGCTGGAGGAGTGATTGCATCTATAGTCATTGTTGCTTGCCTGTTCTGGGTTGGACTTGTTGATCACATTGAGGCCAAGGATGAAGGGACAGCACTGAATCTCCCAGGAATTCCTATTGCCGTTGGGTTGTATGGCTACTGCTACTCAGGTCATGGAGTGTTCCCTAACATCTACTCTTCCATGAAGAAACGCAGCCAGTTCCCTGCTGTTATTTTCACCTGCATTGCATTATCTACTGTTTTGTTTGCTGGTGCTGCAATTATGGGATACATAATGTTTGGTGAATCAACAGAATCTCAGTTTACATTGAACTTGCCATCTAATCTGGTAGCTTCCAAGATTGCCGTCTGGACAACGGCGTATATTCTACCATGTGCATGCTTCTTGGCAATCCTTAGGAGAACAGTGACTTGGTATCAGGTACTGCTATGTGTATTCATCATTGTTGTTGGGCTCTGCTGTGCTGGTGTGGGCACATACTCATCTTTATCTAAGATAATCCAAAACTACAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MDNSVSDRSFLIDSDEEDDAAAAVEDGKRRGHGGDESDDGSDSSSSCGTPRVAAAGGGGRGRGSQPSSYTQQWPQSYRQSIDMYSSVQSPNLSFLGTPTLSRLSNSFLTASFRGKPPEIISGLIKPLLPTTAAAAAADDEGDRRQQQHEDGRKSSQYLLPPRRPSSLQKIPEDQKPLVVGHHEVGPYRQCTYTQGVLNGVNVLCGVGVLSTPYAVKQGGWLGLIILALLAVLAWYTGILLKRCLDSKEGLETYPDIGHAAFGTTGRIVISVILYMELFNIGNIFIGPNVSLQACCIEYLILESDNLSKLFPNAHLIIGTCTINAHILFAILTTLIVMPTTWLRDLSCLSFISAGGVIASIVIVACLFWVGLVDHIEAKDEGTALNLPGIPIAVGLYGYCYSGHGVFPNIYSSMKKRSQFPAVIFTCIALSTVLFAGAAIMGYIMFGESTESQFTLNLPSNLVASKIAVWTTAYILPCACFLAILRRTVTWYQVLLCVFIIVVGLCCAGVGTYSSLSKIIQNYK</aaseq>

Gene Sequence

<dnaseqindica>1..233#1616..1977#4359..4573#4672..4695#5078..5300#5565..5784#5874..6009#7055..7117#7964..8059#ATGGACAATTCGGTGTCGGACCGGAGCTTCCTCATCGACAGCGACGAGGAGGACGACGCCGCCGCCGCCGTCGAGGATGGGAAGCGTCGCGGCCACGGCGGCGATGAGTCGGACGACGGGTCGGACTCGTCGTCGTCGTGCGGTACCCCGCGGGTCGCCGCCGCCGGCGGCGGCGGCCGCGGCCGCGGCAGCCAGCCCAGCTCCTACACGCAGCAGTGGCCTCAGAGCTACAGGTTCGCCGACGCAAGTTCATTTCTTCTTTATATTTTTTTTCTTTTCTTTCGCAGTGCCACGCGTCAATAAAAGTCCAAACTTTTCTGTTTACAGTCGAATAATTTTCAGTCTTTTCCATTCTTTTCTGGAGAGTTCAGTTTGCCATCCCGTACTAATTAATCACCACTAGTCTTACTTTTTTTAGCTGTGAATTTTGCAATGCAACACTTTTTTCAAAAAAAAAAAGAAAGTATGGCAGTTTTTCTGTTGTTTCTTAACAACTCATTTGGTACGTTTCTTGGATAATGAACATCTGGCAGGTAGAAAAGCAAAATACGAATTCAGATTCTAACTTCTTTTTACTAGCACACAAAGGGTCTGTTTGGCTAATGGGTTGGGAAAATATTTCCCACCCACCAAAAAGTTTCTTCTAATCCTAGCCATCCATTATCCCTCCCTCATTTCATCATAACCCTTCATCCATTTCCCTATTCCAATCCCGCTATTCTTATCCCATTATCTAAACACACTATAAGAATATCTGCAAGAACAGTTTGAAACTAAGAACAATGATTTATACATTTTTATTTGGCATAGACATACCACATGACATATTCTTCGAAAATTTTAGTTGATTATATTTCAGATGCCTTCTGATCCTGATAGGCCTATGATGGCCAGAATATTCAGGATATGCAGTAGCCATTTGGGATGGCATCGGGGTGTGGGGACACGTGTCGGTGAACCTATAGGTCGATTGCAGTAGCCATTGACATGTGGGCCCCACGATAGCGACGTGTCACGCCTACTACTGGAATTGGTGCTACGTGTCACTGTTCCTGTGGTCCCTGGTGCTGACTTGGCAGCTTCAGTTGGTCCCATCTGTTCTTCCAAAATTGCCGAATAATTTTGTCTGAGAGAAGGAGAGAGAATCAGTGGGCGTTGTGCAATCTGAACATTCAGAATATATAGTGTTTTACATTCAGAATCAATATGATCGGCGCCTTTGCTATTTTTATTTTATCTCTTCTGAATATATAGTGTTTTACATTTTGGAAAGCAACTAAGAAAACGAATCACAGGGACTGAAATTTCGGAAATTTTTCAGAAATTTCAAATGGAATTTTCAGTCAAATTAGTTTTTGCTGTGTATGCGCAATTTTTCGTTGCATTGAAACAAAATCAAAAAATTTTGACCAGAGTAAATTCCTACAAAGAATTAAACACAAGTAGATCCGAAATTTTAGACCCTGGGTTCCGTTTATATGAACCTGAAAAAGCACGTATAGTTTCTTCATTAAATGTTCAAATTCAGCTTCCATCAGAGCTCAATCTCAGAATCAATATGCAACGTTGAATCACAAGAATTTGATCATGTTTTTTTCTTTCTATGCATCAACAGGCAGTCGATTGACATGTACAGTAGCGTGCAATCCCCGAACCTGAGCTTCCTGGGCACTCCGACGCTGAGCCGTCTATCAAACTCATTCCTGACTGCCTCGTTCCGGGGAAAGCCGCCGGAGATCATCTCCGGGCTCATCAAGCCACTGCTGCCGACGACGGCAGCGGCGGCGGCGGCCGACGACGAAGGTGACCGCCGGCAACAGCAGCACGAAGATGGCCGGAAGAGCTCGCAGTACCTCCTGCCGCCGAGGAGGCCGTCGTCTCTGCAGAAGATCCCCGAGGACCAGAAGCCGCTCGTGGTTGGACACCACGAGGTTGGGCCCTACCGGCAGTGCACCTACACTCAGGGCGTCTTGAACGGTATGTTCTGGGTGCATTTGGTTTGATAATTAATTTTAGACCTATTCGTTTTGGAGGAATTTCAAAGCATTTAGATTCCTAAATACTAATTCATATGAATGTCATTGGGGTCATAGGAATGTAAATATAGGAAAACCAAAGGAAGTTTTCCTTTCCTATACAGAAAACAAAGGGAATTTTTCATCCACACAAACCTCATGGAAAAATTCCTATGGATTAAAGTGTGTATGCAATCCTATTCGTTTACTTTTCCTATTCCTATGTGTTGAAATTCCTCCAAAACGAATAGGCCCTTTGGGGTTTTCTGTGTTACTTCCTTGTCTAGTTCTTTCTTTTCATGATTATGAGAGGACAATTAAACTACCTACTTTATTCTTAGAAAATCAAACTTTAAAATTCTACTCCCTCCGTCCTATAATATAATAAGTTTTAGAGTTGGATACGGTTATTAATAAAGTAGGTAGAAGTAAATGGTGGAGGGTTGTGATTGGATGAGTAGTGGATGTATGTAGAAAAAGTGAATGGTGGAGGGTTGTGATTGGTTGGGAAGATAATGTGGTAAAGAAGTTGTTATATTTTAGGATAAATTCTGAGGCTAAAAGTTGTTATATTCTGGGACGGAGTTACGTGTGCTTTCTCTATTCCTGTAATTTTATATAAAAATTTCCTCCAAGGGAGACTCTTTATTCTTACCTTACTACGGGTGAACAGAAATACTTTATTATTAGAGTATCAACATTAAACGTGTACAGAACACCGTTTGCCAGCTTGCCTATGTTTCATGCGTACAATTTTAGTCTAGATTTATGTTTCTTTTTTTTTTAAAAAAAACATAGAATAGATCATGTCATACTCAATTAACCACTGAACCTGGACGCATGATCTGCGGATTGAAAATAATGCACATGTACTAATATTCTCCTCAGATCTAGTATTTCACTGCTCGGTCTGAAAATAATGCCCATGTACTAATATAACTCCGTACCTGACGATTAGTTGTCAGTCAAATGATTCAAGGATCATAATTATATGACATATGGATTAATTCTTCGCTAGATTGATCCATTTGACATCACAGGCCCACAGATTGAGCACTCTTATTCTTGGCCTCTATATCAAACAGGGAGTATGTCGCATATGCATCTCACATGGCTGATGAATGATCAGGACATTCATGTGACAGAACATGGACAATTGGGCTATAATTGTACCAGCCAGCCGTACTGATTAATTAGATCTGTCTTTGTCCAGGAGAAAGAGAAACCTTGTCCTGATCAAATCATGGAATATCCTAATGAGAACACTGAAACTTAGTGCCTAGAGAGCAACTGTGGATCCTGATCCATTCTGTCACAAGATGTCTCTGTCTCCTGTTATTATCAGACATTCCATCACAATAATCGTCTAATCGGTTTGACGGTGATAAGAGGGACGATAGTTGTATACTTTCTCTGTCCCATAAAAAATAAATATAGTACGGAATATAACACATACATATTAGTACTATGAATGTGACACATCACGAACTAAGTTTATTTTTTATGAGACAGAGGGAATAAGTTCATAAGTGCACCAACCACATTATGTGGACAAAGATGTTTAGGATAAGATTCAGTAAAACTTTTGAAATTCCAATATTCAATTTATATTGCAATAATAAGTTTATTAAATCTAGTAAATTTATGATACTGTGATAGTATTTTTCGAGACAAATTTATGTATATCATTTCTTTTATTTCTAAACTAAGCATTTGAGGAACTGTTGATGGTTAAATTTTTTTAAAAAAACATAACTGAATTTTTCCTAAACATCAAATATTTTTACCAAGGGATTATGTGACATGAGTATGGATTTAGAGTTTTTTCTAAATCAATAGAACAATTTTATTTACTAAACCTAAATAACTTAGAAAAACAAGGATAAGCCTTATATTCTTCTTAAAATATGAGATATTCTTAATTATTATATAAAAATTTGGATTTTTTTTCCATATACAAGACTTTCCATTCTCAGGAAACACCTCATTGCAAACATGAATATGAAAGTGTTTCTATTAAACAGACTTTCAGAGTGTAAGTACACTTAAATCCTACCATCTGCTTAGTGTAATTTCAGACTGTAATTATACCAAACACCATACAAAAATTCATTTTCCTTACAGAAGAACACAGTTTCACTGCTGAATTAGTTTCTCTAGGTTTTGAATATATTAATGTCTAGTACAAGTTGAATCTCATATAGTATTTGCAGCCTCAGTTCATCTGTTACAGTTGAAATTCCAGGTCTGTGTGAGAACTGAGAAGATCAATTACTCTGTTAAAATTTACAGTATATGTCAATCCAGCAATATGATTCTCTATTTCAATTCTGTGATATACAGGAGTGAATGTCCTGTGTGGTGTGGGGGTCCTATCAACGCCTTATGCTGTCAAGCAAGGTGGCTGGCTTGGGCTGATTATATTGGCTCTGTTGGCTGTGTTGGCATGGTACACCGGCATCCTGCTGAAACGCTGCCTGGACAGCAAGGAAGGCCTTGAGACCTACCCGGACATTGGCCACGCAGCTTTCGGCACCACTGGTCGCATCGTCATCTCGGTAAACTGTCAGTTTACATTTGTTATGTTTTCATTGTGTTGTTCCATGGATGATGATTCTGTGATAACTCTGATTTTCTGATGTCTTTCAACCTGCAGGTAATTCTATACATGGAACTGTTTGTAAGTACTTCTTACCGACAATTCAGTTTAGTTGTGTATTTGTATTAGATTATTAGTTGATGCTATAAAAACATTACTCTCTCCCGAATAAATTAGTAACGCAATTTACAGAAAGAGTTAAATTAATGTATTACTAAATGGTTTGTAATAGAATATTGAGTTTAGTGGAGCAATTTGGTTTCAGAAAAAGAAAGTCAAGCATTAACCCTAGTGAAAATTGAAATCTATGCAAGAATAGAAGCCGGAAAAGTTATCATAAATCAAATATACCAGAATTGTATGTTAAGACTGGAACAACTTTATTCCGTAAAGCATTCTACATTGTAGTGTTAAAAAGAACAGATGCATTGAACTTTGAACCATTCTGTTTTATTTTGTACAGAATATTGGCAACATATTCATTGGTCCTAATGTTTCTCTACAGGCCTGTTGCATTGAGTATCTGATATTAGAGAGTGATAATTTGTCAAAGTTGTTCCCCAATGCACACCTGATCATTGGGACATGTACAATAAATGCGCATATATTATTCGCAATCCTGACTACTCTGATTGTCATGCCAACAACTTGGCTTCGCGATCTCAGCTGTCTAAGCTTCATTTCAGGTATCAACACTTGTCACCGGAATCCTTTGTTTCACCAAATATATTTGCAAAACTTGAACTTATTGAATATTACACACACACAAGTACTCTTTCAAAAAAAAATAGTGGGCCAAGGATATGCTGCTGGTATTTGTTACTTTGAGTATATGTTAGGGGACACACACCAAACGGATGTGCAAGTGTGGTGTTTGCGCATACATATAATCGGGAAAAAAAAGGGGTGCACAATGTGCCTTGGATCTCATCTTGTTCATTCTGTTATAGCTGGAGGAGTGATTGCATCTATAGTCATTGTTGCTTGCCTGTTCTGGGTTGGACTTGTTGATCACATTGAGGCCAAGGATGAAGGGACAGCACTGAATCTCCCAGGAATTCCTATTGCCGTTGGGTTGTATGGCTACTGCTACTCAGGTCATGGAGTGTTCCCTAACATCTACTCTTCCATGAAGAAACGCAGCCAGTTCCCTGCTGTTATTTTCACCTGGTAATAACCCTAGAACAAATGTCTGTGATTCATAAGTTCTTTAAAAAACAGTGATGCCAAGCTTTGCTTATGTTTTTTTTTCTTGACAGCATTGCATTATCTACTGTTTTGTTTGCTGGTGCTGCAATTATGGGATACATAATGTTTGGTGAATCAACAGAATCTCAGTTTACATTGAACTTGCCATCTAATCTGGTAGCTTCCAAGATTGCCGTCTGGACAACGGTATTGTTCTTGTCTAAATTAGAGGAAGCTATGACATCTAGTACAATGTTGACATAAATGCATCACTTGTATGATTGAGTAAAATTAAGTTATGTATGACTCTTTATTTCAGTCATCTTTAGCATTCTCTGTAACATCTGGTATAGCTTCTAATACTTAATGTTGTTATTAGGAATATTGTACTCTACTGATAGTGTATACTTTGCTTTTTCTTGCAGGTGACAAATCCAATAACTAAATATCCTTACTGTGTTATTTTGTCTTTTTTACACCTATTTTCCCACGCTACTTTGTCATTATTGAACAACATGTTGGCAGTTCATTACAAACTAATAGATAGCTAGTTCAATTATACGGAATAAGAAGATTTTCAATTTATTAGGTTGTAAAAAAGCATATTTAATTCAAGTTTCTCATAATGTTTTTTCATACTTTGTTCCATGTTGTAAGCCGTTTTTGCTTTTGTCATAAGTCAAACTTCTCATCTATAATAACAAAAAAGTCACTATAAAAGATATATTTCACAGTGGATTAAATGAAACAAATTAATTTGATGTTGTAGATGTTGATAATTTTTTTTGTAAACTCAGTCAAAGTTAGAGAAATTTGACATAGGACAAAAGCTAAATATGAATTGGAGGAAGCAGTTTGGATATCCTTAACTAATAACCACATATGCACTGACCATGACTCCTCTTGCCCTTAGTATGGAGGAGTTGCTACCTCCTAATCGACAGACGTACTCAAACATAGTCATGCTTAGATCAGCACTTGTGCTATCTTCCCTCATTGTGGCTCTCTCTGTTCCATTCTTCGGTAAGTCCTTCTCATCACTTATATCAGTACTTTCCAAAATGACTATGTTGCTTATTTTCTGTTCTAATCTTCACATTTAATTGATGTTTTTGAGCCCTTTCAGGACTTGTTATGTCACTAGTTGGGTCCTTCCTCACCATGTTTGTGGTGAGTTATCTTTCCTTCAGTTTTTTTTTGGGTCTTAGTCATGCTGTTTATACCATTTATATATACATGTTTTTGGTTTTAGGCGTATATTCTACCATGTGCATGCTTCTTGGCAATCCTTAGGAGAACAGTGACTTGGTATCAGGTACAAATAAGAATTATTTTCATCGAATTGCTCAAGTACTTCAATTTGATAGTTGTTCAATATAGAAATTATTACTATGTTAGTTTTCCAACGGCTGAAAGTTTACCTCATCCCATGTCTTATTGTCTACCACCCACTATCTAAATTACACGCCGGTCAATATACAGATACCTATACATTGTCATAAAACCAATGGGGAATTTCGCAAAAGCTCAGTAGCATGCAACCAATTAATTTTACTCACCTTATGCGGATGACATCAAAACTCTAGCTTGGGCAACGTTTGTTTTTTTTTTTTGCGAATTTGTGTTGAAAATGCTTAATTACTTCCTGACTAATTGAAAGGAAGTCTTGGGGATCAATTCAGATGACTATGCAGACAAACACAAGCTGCAAAGATCCTGTACTGTTTCCAAGTAAATTATGCAGTAGTCTTCAAGCTTTCCTTAATTTTCTTACAACAGGTCAACAAGGCTTGAAGAAGAAACAATTCGATCATATTTGCAAGAAACTAATTTGATCATATTCATAATATGCAACAGATATTAGTATGCTCTGCCAGGAATAGATGAATACATATATACATGTATATAGTAATCCAAGTAATGGAACAATCTGAAGATTAAATGGATCTTATAATTTAGACTGATCCGTCTAGTTCAAAGAGTTCAAGGATATTCATTAATTACGCGTCGCTATTCACCAATTCAATCTGGATTTTTCTGTGGGAACTAATTAGCATTCTTTTTGTATATGCAAGAACCAAAATCCCATAATTTCAATATTCAAGCTCAAATTTTTTTTGGAAATATGCCATTTAATAAACATGAATACCATATCTTGCAGGTACTGCTATGTGTATTCATCATTGTTGTTGGGCTCTGCTGTGCTGGTGTGGGCACATACTCATCTTTATCTAAGATAATCCAAAACTACAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015602

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