Os12g0638800

From RiceWiki
Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0638800| Description = HI0933-like protein family protein| Version = NM_001073915.2 GI:297613609 GeneID:4352911| Length = 4102 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0638800

Description

HI0933-like protein family protein

Version

NM_001073915.2 GI:297613609 GeneID:4352911

Length

4102 bp

Definition

Oryza sativa Japonica Group Os12g0638800, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27620758..27624859

Sequence Coding Region

27620758..27621138,27621257..27621316,27621412..27621525,27621823..27621957,27622049..27622150
,27622379..27622426,27622617..27622688,27622754..27622853,27623449..27623531
,27624016..27624114,27624226..27624276,27624415..27624537,27624758..27624859

Expression

GEO Profiles:Os12g0638800

Genome Context

<gbrowseImage1> name=NC_008405:27620758..27624859 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27620758..27624859 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaagcccaaagaggaccaaagaggcccaaataaagatgaggcccagaagcagaagcaaacaccatggttagctcagctggaggagagccaacaagcaaaaatgccgcagtggccgtcactccagctgcccgccgccgccgccgcccgccgcgccactcccttcgccttgtgcaggagctcgtcgtcctccgtttctgcgtcagcgtccaaccaggacctggtagcgtgttcttggcaaaaggaggatgaggccgaggcgcagtcgttggtggtggtgggcggaggcgccgccggggtgtacgcctccataagggccaagtccctggctccccacctcaacgtcctagtcttcgacaaaggaaggttcttgtccaaggtcaagatttctggtggtggccgatgcaatgtcaccaacgggcatcatctggagccattggggatggcaagaaattatcctaggggacacaaagaactcagaggatcgttcttcaaaaatcatggccctcaggatactatgcgttggttctcagatcatggtgtcgagcttaaggctggtaaagctgtgactggtgcatctgtcactgaaaatgggaagtttgttgtgaaggttgagaagcgtaccgttgattttgtggatcatgtaaacgctaaatatgtcttagttgctacagggagcagccagcagggttattcaattgctgcacaatttggtcactctattattgctccagtgcccagccttttcacatttaaaattacagacaagcgattggctgacctctctgggtggaaatcacaaatcaagtggaagcatggaaaccctttcagaattcacgtcacattcccaatagtcaaagcaaaactgaagctagacggcattaagagaagtgctcctgaattaactcagattggacctatgttagttacacactgggggcttagtgggcctgttgttcttcgtttgtccgcatggggagcacgtgaactgcatcagtacaactaccaagcaaagctcaccgttgacttcatacccgacattcatattgaggacgtgaagcgcatccttttcctgcacaaagatcaccatgcgagtttagatggtgatatgcactgggcgtccataccaaataataatctaaacacagtagcccttaggttaaagcaatggatgtttgaggttgtcgctaagggtcaattcaaagatgaatttgtcaccgccggaggtgttccactttcagaggagaggtatacatttgttcctgaacttgcaacactctggatcagcaagagaacaattgaccttagcatgaccgtggtgcaggtacttaatgttgatggggtcactggcggattcaattttcagaatgcatggaccggtgggtatatagctgggacaagcataggaacattggcatcaagcaacatgaggcagcaacagccatatttgcaactggacggatcatga</cdnaseq>

Protein Sequence

<aaseq>MAKPKEDQRGPNKDEAQKQKQTPWLAQLEESQQAKMPQWPSLQL PAAAAARRATPFALCRSSSSSVSASASNQDLVACSWQKEDEAEAQSLVVVGGGAAGVY ASIRAKSLAPHLNVLVFDKGRFLSKVKISGGGRCNVTNGHHLEPLGMARNYPRGHKEL RGSFFKNHGPQDTMRWFSDHGVELKAGKAVTGASVTENGKFVVKVEKRTVDFVDHVNA KYVLVATGSSQQGYSIAAQFGHSIIAPVPSLFTFKITDKRLADLSGWKSQIKWKHGNP FRIHVTFPIVKAKLKLDGIKRSAPELTQIGPMLVTHWGLSGPVVLRLSAWGARELHQY NYQAKLTVDFIPDIHIEDVKRILFLHKDHHASLDGDMHWASIPNNNLNTVALRLKQWM FEVVAKGQFKDEFVTAGGVPLSEERYTFVPELATLWISKRTIDLSMTVVQVLNVDGVT GGFNFQNAWTGGYIAGTSIGTLASSNMRQQQPYLQLDGS</aaseq>

Gene Sequence

<dnaseqindica>1..381#500..559#655..768#1066..1200#1292..1393#1622..1669#1860..1931#1997..2096#2692..2774#3259..3357#3469..3519#3658..3780#4001..4102#atggcaaagcccaaagaggaccaaagaggcccaaataaagatgaggcccagaagcagaagcaaacaccatggttagctcagctggaggagagccaacaagcaaaaatgccgcagtggccgtcactccagctgcccgccgccgccgccgcccgccgcgccactcccttcgccttgtgcaggagctcgtcgtcctccgtttctgcgtcagcgtccaaccaggacctggtagcgtgttcttggcaaaaggaggatgaggccgaggcgcagtcgttggtggtggtgggcggaggcgccgccggggtgtacgcctccataagggccaagtccctggctccccacctcaacgtcctagtcttcgacaaaggaaggttcttgtccaaggtatagaaattctctttgtttgttttaatttctattttccatcaggcactacttcctttccaccgaatatatcattgttactgttgatttgttgccacttccgacgaggctgctgtaggtcaagatttctggtggtggccgatgcaatgtcaccaacgggcatcatctggagccattggtttgttcttgtccacactggatgcatatgctctatcctatcgtctcctttgttcactttcactgtaacagactgacagttgaattcttgttcaggggatggcaagaaattatcctaggggacacaaagaactcagaggatcgttcttcaaaaatcatggccctcaggatactatgcgttggttctcagatcatggtgtcgagcttaaggtatcatagtcatgacaccaagattattaaataaatcttttacatccattgatcatctattagtctgaacccacccggtcaagttattgatgtcgtggctgtttctattggttcgatttcatatcagacagaagatgatggtagagttttccctgtcactgacaattctgcatcgatagtagattgcctactgaatgaagcaaggcgacttggaggtatcttgtcctaattgactctgttgtttattcatttgtcatctgaaatttaaacaacaatcgaatggaagtttccctgcaggctggtaaagctgtgactggtgcatctgtcactgaaaatgggaagtttgttgtgaaggttgagaagcgtaccgttgattttgtggatcatgtaaacgctaaatatgtcttagttgctacagggagcagccagcaggtttgagaaaagatgtttggctcctcccttcttgttattgatgtataatacagcataaagttctcctcctttacatttttcttacctgcagggttattcaattgctgcacaatttggtcactctattattgctccagtgcccagccttttcacatttaaaattacagacaagcgattggctgacctctctggggtatttatccatgaatacctttgtggctcttatgttatgaagtagcaaccaagacttgtaaatctcgttttcatcactgttatgcttttgacaacaaaacaatcatgtattgcatatgaagagtctggagttaacatgtttttgtgtgcttccatggtctggtctaggttccatccgagtttaagcatctcatgtgcatatgtatcctgttttctgtctgatatctagtggaaatcacaaatcaagtggaagcatggaaaccctttcagaattcacgttagcttgctgcctcaatggatttttcatgtttctgtctgtgcttttcactagaattgcagtaaacattactatgaaacttaaaacacctctgagtttgctcctaaaaggaggaaagctgatattgtagattttttttttcaagtcaattggacaagagctattcaccccattatctcctgccatgtaggtcacattcccaatagtcaaagcaaaactgaagctagacggcattaagagaagtgctcctgaattaactcaggtgaacatgtcaacattcaattgtttcatagatgtttgcttacattaactgcttggtctttacagattggacctatgttagttacacactgggggcttagtgggcctgttgttcttcgtttgtccgcatggggagcacgtgaactgcatcagtacaactaccaaggtaagatgcaatggaactatgcaggaattgcactacattcgcagcctactggtaaatggcaacacaattttacttgccatgtctgtctgtttccgtacttgcacaagttgcattcagtagatccacaacagagcctttttcttatcagattgctgttttgctgggcatccttatgaggtcacttctatgtagaatgctaaagtcgctgagttattattcaatgagttacgcatggttgcaagtttcataacaaatgagactactggtatctcatattaggaatctttatgctgtcagtggatttggacaaacttaccttcatttgaaacacttctcttgctgtttgttctcttggatcatatgattcttcgatgtattgttctaacaaacagtaaacagctaaagaatggtctctccaccttctgagccaattagctttactgtttgactctttggcagctgcattgagaatttttatgtttcatcaagtatctgaaattttccactatgataatattttacaattatatgtaagacagaagtaaatgtctatattatccacttcactgatacccatacatttcttccaacacagcaaagctcaccgttgacttcatacccgacattcatattgaggacgtgaagcgcatccttttcctgcacaaagatcaccatgcggttcatttctcactcttgtgctattccctttacatgttctattttttttttataatctccttcacgcattcatctaaggatctgaatttctgatgactaacattacacttgattgtccttgctttaataattcagaacgtgtgtactaaaaatagacacgtgtacaaatctctgttctatttgacatattggggtgttttaatcaagactttagatggattctgtaatctgttgcagaaatattccttgtgttcctgtgaatgttctaattgctgaataaaaaaattgcaatgatgaagttgaattaacaagttttagtccttgcagaagcacaaaataaacaactcttttcccatggagttcgctctggtgaagagattttggaaattcttgctagaacaggaggtcataatattactgcggtgctctttactcattcctctattttaattgatggtttcatcactaaaatcttctcgcgcagagtttagatggtgatatgcactgggcgtccataccaaataataatctaaacacagtagcccttaggttaaagcaatggatgtttgaggttgtcgctaaggtatgtgatatcttaatataccaattgaaaacataatgagcgcaatcatttaggtaagaatattttttgtctgtccaaactcacagactgttatctcatcatcatttgtagggtcaattcaaagatgaatttgtcaccgccggaggtgttccactttcagaggttattagtcttaattggttgcagttttcatcaaaactgaatcaacttgcatatatatatgtctaatttgctgccctgttctaaagatatcgctgagcactatggaaagcaagaaacagcccaacctgttttttgcaggagaggtatacatttgttcctgaacttgcaacactctggatcagcaagagaacaattgaccttagcatgaccgtggtgcaggtacttaatgttgatggggtcactggcggattcaattttcaggtacgcattacaagttcccttaaagaatttcacctattttaaaagatcgaactgttcattagagacttggagatctttacatacgacaaagcaaatttcaatctcatcgatcaagtatagcacttgaaataatagaatattattttgattaaaaatgtttcacttattttcaagtagaaaacatggtttgtaactataatctattctacattctccacagaatgcatggaccggtgggtatatagctgggacaagcataggaacattggcatcaagcaacatgaggcagcaacagccatatttgcaactggacggatcatga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0638800, RefSeq:Os12g0638800

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0638800&oldid=6450"