BGIOSGA015611

From RiceWiki
Revision as of 04:16, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015611| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015611, complete gene.| tag = OS04G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015611

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015611, complete gene.

LocusTag

OS04G0167900

Ensembl Transcript ID

BGIOSGA015611-TA

Ensembl Protein ID

BGIOSGA015611-PA

Length

5335

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:3690318..3695652

Sequence Coding Region

3695179..3695652,3694438..3694803),complement(3693363..3693468,3690318..3690676

Genome Context

<gbrowseImage1> name=IndicaChromosome04:3690318..3695652 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:3690318..3695652 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGATGGCTAGCGCCGGCGTCAACATGCCGGGTGGCGATGGGGACCACCCCCCCGCGGCCGCCCAGGAATGCCACCGCCTGCGCAGGCGCCGCTACGTCCCCGCCGCCGCCGCCGCGTCCGAGGACGGGGACAACAGCAGCAACGGTGGGGGCGAGAAGAGGAGCCTCCCGGCCTCCTCCGCGTCGCCGTCCCCGTCCCCGACCTCGTCGGCGGCTTCCTCCGACTGCTCGTCCGACCGCGACGACGACGGGTGCTCCTCCACCGCCGGCGCCGCGGCGCGGCGGCTCCCGCTCCCGTCCGGGGCGTCGACGGCGGCCGCGGTGTGGCCCGTCGCGTTCGGGTCCGTCTCGCTCGCGGGGCGGATGCGCGACATGGAGGACGCCGTCTCGCTCCGGCCCTCCTTCTGCACCTGGCTCGACGGCTCGCCGATGCACTTCTTCGCCGTCTTCGACGGCCATGGCGGCCCCCATGTGTCCGCGCTGTGCCGGGAGCAAATGCACGTCATCGTGGCGGAGGAGATGGTGGCGGAGGCGGCGGCGCTGCGGCAGCGGCAACCGGCGGCGATGGAGGAGGAGGAGGAGGAGAGGGCGTGGCGGGCGGCGCTGTCGCGGAACTTCGGCCGGGTGGACGCGCTGGCGGCGGTGGCGTGCGCGTGCGGGCGCGCCACCGCGCCGGTGTGCCGGTGCCCGCTGTCGGGGCAGACGGGCGCCATCATCGGCTCCACCGCCGTCGTCGCCCTCCTCGTCCGCGACCGCCTCGTCGTCTCCAACTGCGGCGACTCCCGCGCCGTCCTCTGCCGCGCCGGCGACCCCCTCCCCCTCTCCTCCGACCACAAGCCGGACCGGCCGGACGAGAAGGCGCGGATCGAGGCGGTGGGTGGCCGGGTGGTGTACCTCAACGGGCCGAGGGTGCGTGGCATCCTCGCCATGTCGCGAGCATTAGGAGACAAGTACCTAAAGCCTGAAGTCATATGTGAGCCAGAAATCACCATAACCGTGAGGACCGTCGACGACGAATGCCTCATCCTCGCGAGCGATGGGATGTGGGATGTGATCTCAAACGAGACGGCCAGCGATGTCGCTCGACAATGCCTTGAAGACGGGAGCCCCACCAGTGGGCGTCGCGCAGCTGGGAGCGGCGAAGCCGCTTCCAGCAGCGCAGGTGCTCCGGCAGCAGCGGTAGGCGAAGAATCTGAGCCTCGCTGCTACCGTGCCGCTGCTCTCCTTGCGCGCCTCGCCCTCGGCAGGGAGAGTTCAGATAACATTAGTGTCGTTGTGATTGATCTGAAAGGAAGAGGGTAG</cdnaseq>

Protein Sequence

<aaseq>MVMASAGVNMPGGDGDHPPAAAQECHRLRRRRYVPAAAAASEDGDNSSNGGGEKRSLPASSASPSPSPTSSAASSDCSSDRDDDGCSSTAGAAARRLPLPSGASTAAAVWPVAFGSVSLAGRMRDMEDAVSLRPSFCTWLDGSPMHFFAVFDGHGGPHVSALCREQMHVIVAEEMVAEAAALRQRQPAAMEEEEEERAWRAALSRNFGRVDALAAVACACGRATAPVCRCPLSGQTGAIIGSTAVVALLVRDRLVVSNCGDSRAVLCRAGDPLPLSSDHKPDRPDEKARIEAVGGRVVYLNGPRVRGILAMSRALGDKYLKPEVICEPEITITVRTVDDECLILASDGMWDVISNETASDVARQCLEDGSPTSGRRAAGSGEAASSSAGAPAAAVGEESEPRCYRAAALLARLALGRESSDNISVVVIDLKGRG</aaseq>

Gene Sequence

<dnaseqindica>1..474#850..1215#2185..2290#4977..5335#ATGGTGATGGCTAGCGCCGGCGTCAACATGCCGGGTGGCGATGGGGACCACCCCCCCGCGGCCGCCCAGGAATGCCACCGCCTGCGCAGGCGCCGCTACGTCCCCGCCGCCGCCGCCGCGTCCGAGGACGGGGACAACAGCAGCAACGGTGGGGGCGAGAAGAGGAGCCTCCCGGCCTCCTCCGCGTCGCCGTCCCCGTCCCCGACCTCGTCGGCGGCTTCCTCCGACTGCTCGTCCGACCGCGACGACGACGGGTGCTCCTCCACCGCCGGCGCCGCGGCGCGGCGGCTCCCGCTCCCGTCCGGGGCGTCGACGGCGGCCGCGGTGTGGCCCGTCGCGTTCGGGTCCGTCTCGCTCGCGGGGCGGATGCGCGACATGGAGGACGCCGTCTCGCTCCGGCCCTCCTTCTGCACCTGGCTCGACGGCTCGCCGATGCACTTCTTCGCCGTCTTCGACGGCCATGGCGGCCCCCATGTACGTCACCCCCCCGCTAATCCTTTTGCTTAATCCCATCATTATTTCATGCTAATCCTACTCATCATAATCTTGGGTTAGAAAGAAAAAAAAACAGAGACGCGAGACGAGAACAAAAAGACGATAGGAGCATGGGCATTGACTTGATGTGCGACAAATGCTGCTGTTGTGTTGTACCGCATTGCACTGTTTGATCCACCTGGCAATGTTCTAGCACCATCGAAACCGAGATCGACACGTTTTTTTTTTATAAAATTTGTCGTTTAATTTTCGTTTCTGGTTTTTACTACCACTGCTCGATCAGTGACGTGTGTTTGTTTGGTTTTCTCTTTTTTTTGGTGTGATCGATGGACAAAAAAAAATAAAAAAAAGCAGGTGTCCGCGCTGTGCCGGGAGCAAATGCACGTCATCGTGGCGGAGGAGATGGTGGCGGAGGCGGCGGCGCTGCGGCAGCGGCAACCGGCGGCGATGGAGGAGGAGGAGGAGGAGAGGGCGTGGCGGGCGGCGCTGTCGCGGAACTTCGGCCGGGTGGACGCGCTGGCGGCGGTGGCGTGCGCGTGCGGGCGCGCCACCGCGCCGGTGTGCCGGTGCCCGCTGTCGGGGCAGACGGGCGCCATCATCGGCTCCACCGCCGTCGTCGCCCTCCTCGTCCGCGACCGCCTCGTCGTCTCCAACTGCGGCGACTCCCGCGCCGTCCTCTGCCGCGCCGGCGACCCCCTCCCCCTCTCCTCCGACCACAAGGTAATCAGCCCTTCCATTCCTACGTGGCACCCTCCTCACACGCACACGTGTCCCTCACACCACGGCTTTGACCGTACCTGCCAAAATATTCCAAGTCTCGCGCTGCCGTTTACCGTTGACTCCTGCGGGGGGTGGGCCCCAGCCGAGGTGTCGCCTCTCCGGAACCTTCGCGGCCGCGGCTGCCTCGCCGGCGACGCGTGGTTGGCCGCCGGCGACCGGAGAAAAAGAGAGAGGTCGCTCTCGCTTGTCGGAGAGACATGGATCGCCTCGCCTTGCCGTGCTCGCCGACGTGTACCCCGCTAGCGTCATCACAAAAAAGATTATCACCTCGTATTAAAAAATAATAAAAAAAAATTAATTACTAGTATCTTTTTTTCTTCTCTTATTATGGTCTGTTTTTTTTTTTTGGCCCTCTCATTAATGCGAGTAGAAAGGGCAGTGGCAGTGGCAGTGGCAATTTGGAGAATTTGTGGGAACCTCGGGGGTGGCTGCGGAGGGGCGCGGCCCACGTGGTGTTGGGCGGGGGAGGGGGGGATTCCGAAGCGTTTTAATCCATCGCTTTCCTGGAGGGGGACACGCGTTGCTCTCGCGCGGGGCACGTGGGGGGATAAGACTGGTCAGAGTGTGGGGCCAGCTGCTTTGCTGCTGTCTGGTGGGACCTCTTTTTTTTCTTTTTTTATTTTTTATTTTTGCTCTTCCTGAGATGGATTGTGGACCCACACTGGTCAGAGCTTCCTTTTCTGTGGAAAGGGGGAAAAAAGAAGGGGAAAATTGGCTGGGTGTGGTTGGCTGTGGTAGGTCCATGAGGGGGGTAGGAGATGGGGGCAGTGGTTGGTGCGACAATATTCGTGCTGGATGTGGTAGTGTGATTAACCTAATCTTGCTCTTGTATCTTGCTAATCATAAGTGTGATCTTGCTGCTGACGAACCTAGATTACATGGTACTATAATTGACGGTGAATTATGCAGCCGGACCGGCCGGACGAGAAGGCGCGGATCGAGGCGGTGGGTGGCCGGGTGGTGTACCTCAACGGGCCGAGGGTGCGTGGCATCCTCGCCATGTCGCGAGCATTAGGTAATGTCATCGTCATCATCATTGATCTAAATTCTGTCTGCAGGCACTATCTTTGTGTGTTGTGTTTGCTACTCTGCTGTAGAAGAACTGAAATTGCCTGTGTCCTGGGCTACAATGTCTTGGCTGCTAGCTGCACACATGATTCACTTAAGACCACATGATACAGCTGGCAGTGGGTGGCACAATCTGAATGTTTGCGTAGCTAGCTAGCTTTGGATAAAACTTGGAGCCACAATAAAACCAATTTCTGTTGCTCACGTGTTCGTCTTGGCGTGGGTTTTGATTTCACGCGGAAACATGTACTCAATGAGTAAATGTTTCGAAAAGAAGTCTGCTAAGAGCAGGTACAATAGCAGGCTATAAGCCAGCTGCAAACATATTTTAAGAAGATAAATAAGGAGAGAGAAGAGTAGCGGGTTACAGATTTGTAGCCAGCTATAGCACAGACTCCAATACGCAGTGTGTGTATGACTGGTGGGACCAGGTATTAATAGTGTATTATGTAACTATTGTATAAATGAGCTATTAGATTGGCTATAGATAAATTGGAGCTAGTAGTTGGCTATAATATTAAACTTGCTCTAATAGAAGTAGTCAGGAGTTGTACTTGTGCACATAATCTGGAGTTAGGGAGACCAATTATATATGGTTGGTAATGCCTTGCCATTCTAGTTTAGTTGCTCTGGATATCATTTGTTTATTGGTAATGCCTTTTGGTTTTGCTTGATCATTGGGCTAAACCACTGAAGCTCCATTGGCAAGTCAGTTTCTAAGACGTGTCCAGTTGTTCTTAAACTATCATGTTGCCCCCAACGAGGTTGGGGGAAATGGAAATAAACAAAAGATCGGAAGGTAATACTATATCACAAAGGGTGGTTACATTTGTCGCTCTGCATGTTCTTCCAAACATAAAAAGGAACCTATTGCTTTGCATCTTTCCACCCCTTGACCAATCAAAAACTGCCTGGTGACAGAATCTAGGTCAAATAAGGATGTTCCTGCTTTAAGACTATGAGGAAAATAAGTATTATATGCAAGTTTCGTGGCAGGAAGGTTATGAATACGACAATAGCATGGTACCCTATGAATTTAAGGTTTTTTACACTTTAGTTACATAGGATATTTGCATCTGTCCGAAGGTACCAACTTTTTTTTGTGGTTTATACAATTAACTATGACAAAGATAAAAGGTACAATTCCAGCTTCTAATGAGCTTCTAGTAGATGTTACTTGGCAGTTTGTTGAGTTGATACACAGTCACATCACTGACCCCACCGGTTTGTGCCATATTATCTGGCTTATCAAGAAAATGACCATATGTACCCAGTCCATCTCACTTTAGCCATTAGGCCTAACATTTGGCAGTGCCTGTATGGTGTTATTTCATTTAGTTATATTATCAGATGTCTGAAAGAAGAAAGATGGATTAAACATAAAAGACACGCGTTCATCTCTGATTCACCATCTGTGAAAGTGCTAGCTCTTTTTATTAGTTGCTCTGATTGTAACCTAACCAACTGACTAAAAGAAATGATCTTCATAAATAAGTGGGACATATATGTTTGATTAGGCTAGTGACGTTGTCCTCTGTTGTATCCTAAGTTCCCAATAGTGATGTTACACCTTTTTTAATCTAGCTTTCAGGATTGACAAAGGAAATACCTTGGGTAGTAATAATTTGGACCTTTTGACAATAGAGAAAAGCTCAACTTGCACCATTGTAGAACCTTGTCAGTCTATTTGATCTCAAAACTATATAATTGTACTTCATATCGAATGTTTATAATCAAATAACATAGAAAATATTGTCTCTGCAGATCTGATGTTGTTTCTGATAAACCACTTTTTCTTAAAATAGTTTTTATCTGTCTATCTCACAAGCTCTGTTTTAAACTAGAGTTCAGTGGTAGTATGTTTATATATCAGGTTTCAAGTTGGAGAGGGTTGTATTATATTACAGACACACCATTTTGGTTGTAGGAATTGCCCATTTCACATATAGGAAGCACCACACTACTTATCACTTATTAAGTATTTTGAATCAATGATGATTCCTACTCTATATAGTAAATTAATTAATATAATGATAATATAATTTATGTGCAGCAGAAGGAAGCAGTTTACTTGGCCCAAAAGGTCAAAGGAAATGTGTTCTTTCAAAATACTTATCTGTCCAACTTGTCATTATAGGCTTATACATGATACATCACCTTCCCTTGATATAGGCAGTACAAATTTCCCTACATTCTAGTAGTTACTGAGTGGTTATAGAATATTTTATGTTTCTGCATCTCACGTTTGCCCCTGTTTTGATGCTTAAGCTTTTCATTGCAAAAGGGCTGGTCCCTGTGTATCCTTTCATTGTAGCTTCAGAGGTATCTGTGGCTTAAATATTTGGATGGAGTTCTTGAAATGCCGTAGCCATAATAATGTTCTCGATTTCACTAGTTCGTTAGGTTTATATGTGTCATCTTCTCCTTTTTCTTTCATGAAACTAAATAGGATTCCTGAAAATACTATGTAATACCATGAATCTTCTCATTTACTAGAATTCAATGCAATACCATTTGAAATGTTTGAAAATTTATTTCCTTTACTGTATATTACTTACTTTATGAGATTCTTTATGTAAACTAATTCAATATCATGTATGTTACTCTCAATTATTCTAAATATGTTCACGCAGGAGACAAGTACCTAAAGCCTGAAGTCATATGTGAGCCAGAAATCACCATAACCGTGAGGACCGTCGACGACGAATGCCTCATCCTCGCGAGCGATGGGATGTGGGATGTGATCTCAAACGAGACGGCCAGCGATGTCGCTCGACAATGCCTTGAAGACGGGAGCCCCACCAGTGGGCGTCGCGCAGCTGGGAGCGGCGAAGCCGCTTCCAGCAGCGCAGGTGCTCCGGCAGCAGCGGTAGGCGAAGAATCTGAGCCTCGCTGCTACCGTGCCGCTGCTCTCCTTGCGCGCCTCGCCCTCGGCAGGGAGAGTTCAGATAACATTAGTGTCGTTGTGATTGATCTGAAAGGAAGAGGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015611