BGIOSGA015630

From RiceWiki
Revision as of 04:17, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015630| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015630, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015630

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015630, complete gene.

LocusTag

OSJNBB0028M18.9

Ensembl Transcript ID

BGIOSGA015630-TA

Ensembl Protein ID

BGIOSGA015630-PA

Length

3308

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:3388029..3391336

Sequence Coding Region

3390129..3391336,3389474..3389527),complement(3388541..3388697,3388029..3388148

Genome Context

<gbrowseImage1> name=IndicaChromosome04:3388029..3391336 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:3388029..3391336 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCGCGCCGCCGCCGTCGCCGGCGGTGGCGAGGACAGGATTCTCCGACCTCCAGCCAGACCTGGTGGGCGAGATCCATGGCCGCCTCAGCTTCCTCGACCGCCTAGCCTTCGTGGCGGTCTCCTCCGCCGCGTCACGCGACGCGTTGAAGCCGGAGCCGCCGTGGCTGGTCCTCCCGGGCGAGACTCCGGAGACCGCCACGGTCTTCTCCCTCGCCGACCGCCGCTCCGCCACCGTGCGCGCCTCGGGACCCGCGATGCGCGGCCACGTCATCATCGGCTCCTTCGGCGGCTGGATCGTGACCGCCGACGAGCGTGGGCGGATGCGCCTCGCCAACCCCGTCACCGGCGATCAGGGCGACCTCCCGGCCATCACCACCATCCCCTTCGTCAACGCCACCTCGCCGTGGGGTCACCACTTCATCATGGACATGGAACCCTTCGTCCACATCCGGTACAGAGGCGACCACGAGTCGTGGCCGCACCCGTACGGCACGTTCACACACACCGCCGGCGACATCCGCCTCTGGTTCTACCGCAAGGTCGTCCTCTCCGCCTCGCCGCGCCCCGGCGACTACGCCGCCATGCTCCTCTTGGACAGCTACTTCGGCGCGCCGGCGTTCGCCACGGCGGGGGACGGCCGGTGGAGGGTCGCGCCCTCGCGCGACGGCGTCGAGGACGCGATCCACCACGGGGGCAAGTTCTTGTCCGTCACGTACACCGGCATCGTGGAGGCGTGGGAACGCGACGGTGTCTCCGGCGAGTTCACCGGCAAGGTGGTGACCACGCCGATCTCATGCCCCCCGCAGCGCCGCAAGTACCTGGCGGCGGCGCCGGACGGGCGGCTGATGATCGTGCTCAAGAACACCAATGGCGGCGTCAAGAAAGGCTACTTCGAGGTGCAGGTGTTCGACGAAATGACGCAACGGTGGGAGGCGGCGGAGGACATCGGCGAGCTCGCTATCCTCGTCGGCGTGAACAGCTCGGTGTGCGTGTCGACGGCGAAACACCCGGAGCTCAAGGGCGGATGCGTGTACTACACTGACGACGAGATCGGGAAGGCATGGCTGCGGAGAGAGTACGGGTACAGCAACAGCAAGCCGAACGTGGGGGTGTACAGCCTCAAAGACGGCAAGGAGATGAGCATCCCGGGGCTCGGCGAGCACCTCAGCTGGCCGCCGCCGGCGTGGTTCACGCCTTCCTTCCGACTTCGATTGTTGCCATTGGGCCGTGAGCTATTGGGCCTCGAGTATGAGGCCTTGCTCATCCTGTCGCTCGTCGAGCTCGCCTACAAGAACGCCGCCGCCGGCGGCCGCGCCGTCACGTATGCGCTAGCGATGGAGATGCAGCTGGTCCAGGGGCTTCTTCGCCACCGCGTTCTGCACCGTCGGCATGGTAATATGCTCGGAGAGGAGAAGAATTACACAGTACACGCAGACACTCACAACGCACGCGCACTCACCCCTATGAACACACGCACGCAAACCCTACCCCCTACCCCTATGAGCATCTTCGAAGACTGGGCCGGCAAATCCTAG</cdnaseq>

Protein Sequence

<aaseq>MRAPPPSPAVARTGFSDLQPDLVGEIHGRLSFLDRLAFVAVSSAASRDALKPEPPWLVLPGETPETATVFSLADRRSATVRASGPAMRGHVIIGSFGGWIVTADERGRMRLANPVTGDQGDLPAITTIPFVNATSPWGHHFIMDMEPFVHIRYRGDHESWPHPYGTFTHTAGDIRLWFYRKVVLSASPRPGDYAAMLLLDSYFGAPAFATAGDGRWRVAPSRDGVEDAIHHGGKFLSVTYTGIVEAWERDGVSGEFTGKVVTTPISCPPQRRKYLAAAPDGRLMIVLKNTNGGVKKGYFEVQVFDEMTQRWEAAEDIGELAILVGVNSSVCVSTAKHPELKGGCVYYTDDEIGKAWLRREYGYSNSKPNVGVYSLKDGKEMSIPGLGEHLSWPPPAWFTPSFRLRLLPLGRELLGLEYEALLILSLVELAYKNAAAGGRAVTYALAMEMQLVQGLLRHRVLHRRHGNMLGEEKNYTVHADTHNARALTPMNTRTQTLPPTPMSIFEDWAGKS</aaseq>

Gene Sequence

<dnaseqindica>1..1208#1810..1863#2640..2796#3189..3308#ATGCGCGCGCCGCCGCCGTCGCCGGCGGTGGCGAGGACAGGATTCTCCGACCTCCAGCCAGACCTGGTGGGCGAGATCCATGGCCGCCTCAGCTTCCTCGACCGCCTAGCCTTCGTGGCGGTCTCCTCCGCCGCGTCACGCGACGCGTTGAAGCCGGAGCCGCCGTGGCTGGTCCTCCCGGGCGAGACTCCGGAGACCGCCACGGTCTTCTCCCTCGCCGACCGCCGCTCCGCCACCGTGCGCGCCTCGGGACCCGCGATGCGCGGCCACGTCATCATCGGCTCCTTCGGCGGCTGGATCGTGACCGCCGACGAGCGTGGGCGGATGCGCCTCGCCAACCCCGTCACCGGCGATCAGGGCGACCTCCCGGCCATCACCACCATCCCCTTCGTCAACGCCACCTCGCCGTGGGGTCACCACTTCATCATGGACATGGAACCCTTCGTCCACATCCGGTACAGAGGCGACCACGAGTCGTGGCCGCACCCGTACGGCACGTTCACACACACCGCCGGCGACATCCGCCTCTGGTTCTACCGCAAGGTCGTCCTCTCCGCCTCGCCGCGCCCCGGCGACTACGCCGCCATGCTCCTCTTGGACAGCTACTTCGGCGCGCCGGCGTTCGCCACGGCGGGGGACGGCCGGTGGAGGGTCGCGCCCTCGCGCGACGGCGTCGAGGACGCGATCCACCACGGGGGCAAGTTCTTGTCCGTCACGTACACCGGCATCGTGGAGGCGTGGGAACGCGACGGTGTCTCCGGCGAGTTCACCGGCAAGGTGGTGACCACGCCGATCTCATGCCCCCCGCAGCGCCGCAAGTACCTGGCGGCGGCGCCGGACGGGCGGCTGATGATCGTGCTCAAGAACACCAATGGCGGCGTCAAGAAAGGCTACTTCGAGGTGCAGGTGTTCGACGAAATGACGCAACGGTGGGAGGCGGCGGAGGACATCGGCGAGCTCGCTATCCTCGTCGGCGTGAACAGCTCGGTGTGCGTGTCGACGGCGAAACACCCGGAGCTCAAGGGCGGATGCGTGTACTACACTGACGACGAGATCGGGAAGGCATGGCTGCGGAGAGAGTACGGGTACAGCAACAGCAAGCCGAACGTGGGGGTGTACAGCCTCAAAGACGGCAAGGAGATGAGCATCCCGGGGCTCGGCGAGCACCTCAGCTGGCCGCCGCCGGCGTGGTTCACGCCTTCCTTCCGGTGATGATATATAGTTAGTTCTTGGCCTCTTCATGGTCTTCTACATACATAATGTTTACATCTTCAGCTTTGCTTTTAGAGTGAACTTGCGCAGATCAACAGGCCAGGACAATAACTCATGAGGTTTAGTGGCTATCATATACGGAGTCATTTAGTAATTTGGTCTACTTGAAACTTCAACCATATGTGCAGATGTCAGTCGCAAAACGGTCTTGTCAGAAACTCAGTTTTCGCTATTTTGGGCCTTACAAGATTCTGGGTCGCGTTGGAGCAGTGGACTATCGTTTGGAGTTGCCTCAGGGCAGTCTTATTCACCCTGTGGTGCATGTTTCACTACTCAAGAAGGCGATTAGGCCAGGTATTCCAGTGTGCTCTGACTTGCCAGCCAGAAGTTGTGCTCCGTCGTCAGCTGATCAAGAGGGGTGGTGCAGCTGTGCCGTATGGGCTAATACGCTGGACCAATCTACCTGACGATTTGGCGACATGGAAGAACCTACGACAACGGTTTCCTCAAGCACCAGCCTGGGGACATACTGGCTGTTAAGGAGGGGGGGAATGTCACGCTGCTGATTCTGTTGTAGTTCTCTGTGATCTATTTTAGACTTCGATTGTTGCCATTGGGCCGTGAGCTATTGGGCCTCGAGTATGAGGCCTTGTAAGCGTTGTGAGGCGCGGCTATAGGAAAAAAGTACACCGAAGGTCCCTCAACTTGTCATCGAGTTACAAAATCGTCCTTGAACCGCAAAATCGAATATATGTCATCCTCAATTTATAAAACCGGATCACCTTGGGACCTCAGGCGGTTTATACCCTGGTTTTATCCGATGTGGCAGTTGAGTAAACGTGGGACCCATATGTCAGGGTGACACGTCATCACCTCACTTTTCCTGTCTTGTCTCCCTTCCTACTCTCTCTCAGTCTTCTCTAGGCCGGTAGGGCGGGGCGAGGCGGGGTGCGTCGAGGCCGGCTGGAGCAGCAGGACACGCCCGGCGTGCTCAGCGTCTTCAGGGAGCTCAACCCCAATGAGATGCTGGCCAGGAACACACCCAAGGTACATAGCTGCATCCATTAATTGCTGTTGCTGTTGCTGGATAATGAGGAGGATGATGGGATTAATGGAGTTTGTGAGGTGCAGTTCTTGGTGGAGAGGAAAGAGGGGGGGGGGGGGGGGGACGGGTGGAGATGTACTGCGCGGCGAAGCCAGGTCTGCTTCTGTCGACGGTGAGCACGCTGGAGACGCTGGGAAGTGGTGGTAGCAGCAGCAGATCGAGCAGAAAGAAAGAGAGAGAGAGAGATTCAGAGTTCGGTGTTGTTGAGTAGGGCAGGAGAGGAAAAGTTCAGACCCGACGACGACGACGACGCGCCGGGGTGACCACCGGGAAGTACTGGATGGGCTTCTTCCTGCGCCCTCAGCGCCGCCGCTCTGTACAGGCTCATCCTGTCGCTCGTCGAGCTCGCCTACAAGAACGCCGCCGCCGGCGGCCGCGCCGTCACGTATGCGCTAGCGATGGAGATGCAGCTGGTCCAGGGGCTTCTTCGCCACCGCGTTCTGCACCGTCGGCATGGTAATATGCTCGGAGAGGAGAAGGTCCGCCGGTTGGTTCGCCCGCCGGCTTTTCTGCTCCACTCCACCTGTTGCCGTTCGTTCGCCTGCCGCCGCCGGCATCTCCGCTCCACCGCGCGTTCGCCAGCTGCAGCTTCCGGTTGGTTCGGAAGGTAACATCCAATAGATCAACTCAGACTTGTTTAGGATGGGCTCAGCCCGAGTTCGTCAGACAATGATGGCTCATGTGGGGCTTGTTTAGCCCTGCCGTTTTGAGGCAACGATGGCCCGGCCCTCTCTTTTAAAAGGAAGAGCTTTCTCCATTTCCAGTCCAATTGAGAGAAGTGGTGGATATGGTATTCCTAACGTGGCTACGTCACACTTTAGCATCCACGAATTATCAAATTTATTATGACCCGGAAACTTGTTTTTTTTAGAATTACACAGTACACGCAGACACTCACAACGCACGCGCACTCACCCCTATGAACACACGCACGCAAACCCTACCCCCTACCCCTATGAGCATCTTCGAAGACTGGGCCGGCAAATCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015630