Os12g0639400

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Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0639400| Description = AAA ATPase domain containing protein| Version = NM_001073920.1 GI:115489801 GeneID:4352916| Length = 1500 bp| Defin...")
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Gene Name

Os12g0639400

Description

AAA ATPase domain containing protein

Version

NM_001073920.1 GI:115489801 GeneID:4352916

Length

1500 bp

Definition

Oryza sativa Japonica Group Os12g0639400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27648959..27650458

Sequence Coding Region

27649015..27650373

Expression

GEO Profiles:Os12g0639400

Genome Context

<gbrowseImage1> name=NC_008405:27648959..27650458 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27648959..27650458 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcaacaacaacaaccgtcaccatcgacgaccacgcctccgactccttctcccgcagcgaggccttcctcgccgtcgaggcctatctcagcgcctccccctgcgccgcccgcgcccgccgcctccgcgccgaccgcatggccctcgccgtcgacgaccacgaggaggtcgccgacgacttccgcggcgcaaccatgtggtggcgcaagtccaaggccatcccccgcgccaacgtcatcagctgggccccgcgccaggacgagcgccgcagctaccacctcaccttccaccgccgccaccgcgccctcgtcgaggccgactacttcccccacgtcctcgccgagggccgcgccgtcaccgtccgcaaccgccagcgccgcctcttcaccaacaaccccggcgccgactggtccggctacgacgacgcccgcgtctggagccacgtcaagctggagcacccctccacattcgccacgctcgccatggaccccgtccggaagcaggagatcatcgacgacctcgacatgttccgcgacggcaaggactacgcctccgtcggcaaggcatggaagcgcggctacctgctgttcgggccacccggcaccggcaagtccaccatgatcgccgccatggcaaacttcctagactacgacgtctacgacctcgagctcacggccgtcgagagcaacaccgagctacggaggctgttcatcgagaccaccggaaagtcgatcatcgtcatcgaggacattgactgctccatcgatctcaccggcaagcgcaagaagaagaaaaaggacaagaagaagaagaagatgatgccgccatcggacgacgatgacgaggagaagaaggtgacgctgtcggggctgctcaacttcatcgatgggctgtggtcggcgtgcggcggcgagcggatcatcatcttcacgaccaaccacaaggagaagctggacccggcgctgatccggcggggcaggatggacatgcacatcgagatgtcctactgctgcttcgagtcgttcaaagtgctggccaagaactacctgggcgtggagcagcacgagatgttcggcgagatacggcagcttttggaggaggcggacatgtcgccggcggacgtggcggagaacctgatgccgaggtccaagacaaaagacgtggacgcctgcctggagaggttggtgaaggcgctccacgaggccaaggagaccaaagcagcaggcggaaacgacgacgacgatgagtcttccagttccagcgacgattctgattctagttctgactctgaagaacaagacaaactagcagtagtaacaaaactagatttcagtttggcccagccaaactatatcatctga</cdnaseq>

Protein Sequence

<aaseq>STTTTVTIDDHASDSFSRSEAFLAVEAYLSASPCAARARRLRAD RMALAVDDHEEVADDFRGATMWWRKSKAIPRANVISWAPRQDERRSYHLTFHRRHRAL VEADYFPHVLAEGRAVTVRNRQRRLFTNNPGADWSGYDDARVWSHVKLEHPSTFATLA MDPVRKQEIIDDLDMFRDGKDYASVGKAWKRGYLLFGPPGTGKSTMIAAMANFLDYDV YDLELTAVESNTELRRLFIETTGKSIIVIEDIDCSIDLTGKRKKKKKDKKKKKMMPPS DDDDEEKKVTLSGLLNFIDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDMHIEMS YCCFESFKVLAKNYLGVEQHEMFGEIRQLLEEADMSPADVAENLMPRSKTKDVDACLE RLVKALHEAKETKAAGGNDDDDESSSSSDDSDSSSDSEEQDKLAVVTKLDFSLAQPNY II</aaseq>

Gene Sequence

<dnaseqindica>57..1415#aaacacagagcttctctcctctgttctccttctctgttccattgctagcaaaataatcaacaacaacaaccgtcaccatcgacgaccacgcctccgactccttctcccgcagcgaggccttcctcgccgtcgaggcctatctcagcgcctccccctgcgccgcccgcgcccgccgcctccgcgccgaccgcatggccctcgccgtcgacgaccacgaggaggtcgccgacgacttccgcggcgcaaccatgtggtggcgcaagtccaaggccatcccccgcgccaacgtcatcagctgggccccgcgccaggacgagcgccgcagctaccacctcaccttccaccgccgccaccgcgccctcgtcgaggccgactacttcccccacgtcctcgccgagggccgcgccgtcaccgtccgcaaccgccagcgccgcctcttcaccaacaaccccggcgccgactggtccggctacgacgacgcccgcgtctggagccacgtcaagctggagcacccctccacattcgccacgctcgccatggaccccgtccggaagcaggagatcatcgacgacctcgacatgttccgcgacggcaaggactacgcctccgtcggcaaggcatggaagcgcggctacctgctgttcgggccacccggcaccggcaagtccaccatgatcgccgccatggcaaacttcctagactacgacgtctacgacctcgagctcacggccgtcgagagcaacaccgagctacggaggctgttcatcgagaccaccggaaagtcgatcatcgtcatcgaggacattgactgctccatcgatctcaccggcaagcgcaagaagaagaaaaaggacaagaagaagaagaagatgatgccgccatcggacgacgatgacgaggagaagaaggtgacgctgtcggggctgctcaacttcatcgatgggctgtggtcggcgtgcggcggcgagcggatcatcatcttcacgaccaaccacaaggagaagctggacccggcgctgatccggcggggcaggatggacatgcacatcgagatgtcctactgctgcttcgagtcgttcaaagtgctggccaagaactacctgggcgtggagcagcacgagatgttcggcgagatacggcagcttttggaggaggcggacatgtcgccggcggacgtggcggagaacctgatgccgaggtccaagacaaaagacgtggacgcctgcctggagaggttggtgaaggcgctccacgaggccaaggagaccaaagcagcaggcggaaacgacgacgacgatgagtcttccagttccagcgacgattctgattctagttctgactctgaagaacaagacaaactagcagtagtaacaaaactagatttcagtttggcccagccaaactatatcatctgatattggacttgtttatatgtacactctatgtgttggagctgggctgtttgtcttatgtttggttgtggagaagccttagttgtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0639400, RefSeq:Os12g0639400