BGIOSGA015661

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Revision as of 04:17, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015661| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015661, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA015661

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015661, complete gene.

LocusTag

OSJNBB0016B03.15

Ensembl Transcript ID

BGIOSGA015661-TA

Ensembl Protein ID

BGIOSGA015661-PA

Length

7962

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:2177285..2185246

Sequence Coding Region

2185115..2185246,2184535..2184849),complement(2184089..2184201,2183636..2183966),complement(2183330..2183545
,2182783..2183019),complement(2182147..2182332,2180587..2180727),complement(2177885..2178153
,2177528..2177609),complement(2177285..2177452

Genome Context

<gbrowseImage1> name=IndicaChromosome04:2177285..2185246 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:2177285..2185246 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGTAGAAACAATTTCAGGCATCGAGATCTTCGCGAGGACACAGAGAAGCCACCCCTTAGACCCACTATCGGCTGCTGAAATTGCTGTGGCTGTAACAACTGTCAAAGCTGCTGCAAGTACTCCTGAGGTCCGAGATGGCATGCGTTTTGTTGAAGTTGCGCTTCTGGAACCAGAAAAGAACGTTGTGGCATTAGCTGATGCATACTTTTTCCGTCCGTTCCAACCATCACTACTTCCTGGAAACAGAAATGCTCCTATCATTGCAACCAAGCTGCCACCAAGGAGGGCCAAGCTTGTTGTCTACAACAGACAGACAAATGAGACTAGTATTTGGATTGTAGAATTCTCTGAAGTGCATGCTGATAGTGATACTAGGGGTGGACATCACAGAGGAGGCAAGCTCGTATCATCAGAGGTTGTTCCGGATGTTCAGCCTGCGATGGATGCCATGGAATTTGTTGAGTGTGAAGCTACTGTAAAAAGCCACCCCCCTTTCATTGAAGCCATGAGAAAAAGAGGAATTGATGACATGGATCTTGTCACAGTAGATCCATGGTGTGCAGGATATTACAGTGATGCTGATGCTCCCAGTAGAAGAATCGCCAAACCTCTGGTGTTCTGTAGAACTGAAAGTGATAACCCTATCGAGAATGGCTATGCACGACCTGTTGAAGGGATTCATATTATCGTTGATATGCAGAAAAATACGGTGATAGAGTTCGAAGATAGGAAGCTTGTCCCTCTTCCCCCATCAGATCATTTGAGGAACTACACTTCAGGGGAAACACGAGGTGGTGTTGATAGAACTGATGTGAGACCTCTAGTTATCAATCAACCTCAAGGCCCAAGTTTCCATGTCAATGGTTACCTTGTGGAATGGCAGAAGTGGAATTTCCGTATTGGCTTCACCCCTAAAGAAGGTTTAGTTCTTCATTCTGTTGCATATGTTGATGGAAACCGTGGCCGTCGACCTATCGCTCACAGGCTGAGTTTTGTTGAGATGGTTGTTCCTTATGGTGATCCAAATGAACCACATTATCGGAAGAATGCATTTGATGCTGGAGAAGATGGGCTTGGAAAGAACGCAAACTCTCTTAAAAAGGGATGTGACTGCTTGGGTGTCATAAAATACTTTGATGCACATTTTACAAATTTTACTGGTGGCGTAGAGACCATAGAGAATGCTGTTTGCTTACATGAAGAGGACCATGGGATCCTCTGGAAACATCGAGATTGGAGAACAGGATTAGCTGAAGTTAGAAGATCAAGGAGGCTTACTGTGTCATTTATCTGCACGATTGCCAATTATGAATATGGGTTCTATTGGCATTTTTACCAAGATGGTAAGATAGAAGCAGAAGTTAAGCTTACTGGAATTCTTAGTGTAGGAGCTCTAATGCCCGGGGAGCAGAGGAAATATGGTACTACTATTGCCCCTAGTTTGTATGCACCGGTGCACCAGCATTTCTTTGTCACCCGTATGGACATGGCAGTTGATTGCAAACCAAATGAGGCCTATAATCAGGTGGTAGAGGTAAACGTCAACGCGGAATGTGCAGGACCAAATAATATGCATAATAATGCATTTTACGCGGAAGAAAAACTTTTGAAATCTGAACTACAGGCCATGCGTGATTGTCACCCTTCATCCGCACGTCATTGGATTGTAAGGAACACAAGGACTGTAAATCGTACTGGACAACCAACAGGCTACAAGCTCATACCTGGTTCAAACTGTCTTCCGTTGGCCCTGCCTGAGGCGAAATTCCTGAGAAGAGCTGGATTCTTAAAGCATAATCTTTGGGTTACATCATACAAAAACGATGAGATGTACCCTGGAGGAGAGTTTCCTAATCAGAACCCACGAATTAATGAAGGTTTAGCAACATGGGTAAAACAGGATAGATCCCTAGAGGAAACCAACATAGTTCTCTGGTACGTTTTCGGGGTTACCCATGTCCCAAGGCTCGAAGACTGGCCTGTAATGCCAGTGGAACACATCGGCTTCATGCTGAAGATAGTTTTCTTGTCGTACATTGCTCCAGATAACATTACAACTCTGAACAATGGAACCCATATTGTTTTGGTTATACTCCAGCCAGATGGATTCTTCGACTGCTCACCTGCGATCGACGTGCCTCTTGGATCTGAAGTACACACAAAGAATGGGTGGATAAATTATTGA</cdnaseq>

Protein Sequence

<aaseq>MGVETISGIEIFARTQRSHPLDPLSAAEIAVAVTTVKAAASTPEVRDGMRFVEVALLEPEKNVVALADAYFFRPFQPSLLPGNRNAPIIATKLPPRRAKLVVYNRQTNETSIWIVEFSEVHADSDTRGGHHRGGKLVSSEVVPDVQPAMDAMEFVECEATVKSHPPFIEAMRKRGIDDMDLVTVDPWCAGYYSDADAPSRRIAKPLVFCRTESDNPIENGYARPVEGIHIIVDMQKNTVIEFEDRKLVPLPPSDHLRNYTSGETRGGVDRTDVRPLVINQPQGPSFHVNGYLVEWQKWNFRIGFTPKEGLVLHSVAYVDGNRGRRPIAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNANSLKKGCDCLGVIKYFDAHFTNFTGGVETIENAVCLHEEDHGILWKHRDWRTGLAEVRRSRRLTVSFICTIANYEYGFYWHFYQDGKIEAEVKLTGILSVGALMPGEQRKYGTTIAPSLYAPVHQHFFVTRMDMAVDCKPNEAYNQVVEVNVNAECAGPNNMHNNAFYAEEKLLKSELQAMRDCHPSSARHWIVRNTRTVNRTGQPTGYKLIPGSNCLPLALPEAKFLRRAGFLKHNLWVTSYKNDEMYPGGEFPNQNPRINEGLATWVKQDRSLEETNIVLWYVFGVTHVPRLEDWPVMPVEHIGFMLKIVFLSYIAPDNITTLNNGTHIVLVILQPDGFFDCSPAIDVPLGSEVHTKNGWINY</aaseq>

Gene Sequence

<dnaseqindica>1..132#398..712#1046..1158#1281..1611#1702..1917#2228..2464#2915..3100#4520..4660#7094..7362#7638..7719#7795..7962#ATGGGGGTAGAAACAATTTCAGGCATCGAGATCTTCGCGAGGACACAGAGAAGCCACCCCTTAGACCCACTATCGGCTGCTGAAATTGCTGTGGCTGTAACAACTGTCAAAGCTGCTGCAAGTACTCCTGAGGTCTGTCCACATACTTCTACTGTTGGGTACTACTAAGGCCGTGTTTAGTTCACCCCCAACTATCCCAAACTTTCAACTTTCCATCACATCACATCCAAAACTTTCCTACATACATAATCTTCCAACTTTTTTTCCAAATTTCCAACTTTCCCCAAACTTCCAATTTTTTTTCAGGAACTAAACACACCCTAATCCTTAATTTTATACGAAAATGCTATATATTCTTCGAATAAATAATTTACAAGTGATTCCAACATATATATAGGTCCGAGATGGCATGCGTTTTGTTGAAGTTGCGCTTCTGGAACCAGAAAAGAACGTTGTGGCATTAGCTGATGCATACTTTTTCCGTCCGTTCCAACCATCACTACTTCCTGGAAACAGAAATGCTCCTATCATTGCAACCAAGCTGCCACCAAGGAGGGCCAAGCTTGTTGTCTACAACAGACAGACAAATGAGACTAGTATTTGGATTGTAGAATTCTCTGAAGTGCATGCTGATAGTGATACTAGGGGTGGACATCACAGAGGAGGCAAGCTCGTATCATCAGAGGTTGTTCCGGATGTTCAGCCTGCGATGGTATGTTTCCACTTTCTGTATATTTGTTAGGCACAATTCTATTGATTTTGATCATTTTATTCAATCCTTTTGACACTTAATTACTGCTGATTTGTATGGCCATAATTAATCCAAATTTATTGTGTAATGAACATGTAGTTAAATCCTGATATTTACCTGATCACCTCTTATAAATTATGTCTGGTTTGCTGTGCTATTTTCCTCAAAAACTATGACCCGAATGACAGAATCTTAGCTGGAAGCATTGAGAAAATTTCGCAATACATTTTTATATTTGGTCAAGTACTAGATTTATTTGAATTTTTCTAGTTCTCATGTGTATAAATTTTTCAGGATGCCATGGAATTTGTTGAGTGTGAAGCTACTGTAAAAAGCCACCCCCCTTTCATTGAAGCCATGAGAAAAAGAGGAATTGATGACATGGATCTTGTCACAGTAGATCCATGGTAAGCTAGCTAATTTGTTTAATTTATGTTGTTAATAAACGTTGTATACAACATTATCGTTCAGCTCTTGTTGCAGGAACAATAGAGCCTTGAAACATAATTCCTTTTCTGCTTGAATACAGGTGTGCAGGATATTACAGTGATGCTGATGCTCCCAGTAGAAGAATCGCCAAACCTCTGGTGTTCTGTAGAACTGAAAGTGATAACCCTATCGAGAATGGCTATGCACGACCTGTTGAAGGGATTCATATTATCGTTGATATGCAGAAAAATACGGTGATAGAGTTCGAAGATAGGAAGCTTGTCCCTCTTCCCCCATCAGATCATTTGAGGAACTACACTTCAGGGGAAACACGAGGTGGTGTTGATAGAACTGATGTGAGACCTCTAGTTATCAATCAACCTCAAGGCCCAAGTTTCCATGTCAATGGTTACCTTGTGGAATGGCAGAAGGTTAACTGGCTATCTATAGTGTTTACTGTTTAATTATTGGCATAGTGGTATCTAATAAAAATAATTCAAAATACATTTTCTGTTGAACAGTGGAATTTCCGTATTGGCTTCACCCCTAAAGAAGGTTTAGTTCTTCATTCTGTTGCATATGTTGATGGAAACCGTGGCCGTCGACCTATCGCTCACAGGCTGAGTTTTGTTGAGATGGTTGTTCCTTATGGTGATCCAAATGAACCACATTATCGGAAGAATGCATTTGATGCTGGAGAAGATGGGCTTGGAAAGAACGCAAACTCTCTTAAAAAGGTTCTTATTTTGATGTTCCATATTAGCACCTCAGTGTAATATACTTGCCATAAATTTTACTATTAGATAACTTGGTCTGATTGAGTGAACACAAAAGAGTGATTTACTAGGAACAATAACTTCTTCCATTTATTTATTCTTTTTCTTATCATCTCTATGGAATTTCTCATTTCATTTTTTTTAAAAAAGTTAAGGATTGAAATTGTGTTGATTATGCTTGGTGATGAATTAGTTTTACCGGGCCGATGACAAGAATGTATTTTATGGTTGCACCTATAGGCTGATTGGACTTAACTTTGTTATAATGTAGGGATGTGACTGCTTGGGTGTCATAAAATACTTTGATGCACATTTTACAAATTTTACTGGTGGCGTAGAGACCATAGAGAATGCTGTTTGCTTACATGAAGAGGACCATGGGATCCTCTGGAAACATCGAGATTGGAGAACAGGATTAGCTGAAGTTAGAAGATCAAGGAGGCTTACTGTGTCATTTATCTGCACGATTGCCAATTATGAATATGGGTTCTATTGGCATTTTTACCAAGTGAGTAATTAGTGAAATGTCTACACCTACAATCTACACTTACTTTAAAATTAGAATTCACTAACAGTTATTAATTTCTAAAGCTCAACATTTAAATGTACCACGTGAACATTCACTCACTAGCAATTATTTTCTGTGAAAGCTTAACATTTAAATATACCACATCATCGCCCCACTATCGAACTTGTGAAAACATCATCCTCCATGTCATCTCCACAATCTTTTTAACGTAGATCCCATTCTTATGATACCACTCAATGTATACATATTCCGCATTAAAGCACGATATATCAATTGTACTGAATAAAGGAGTAAACTATAGGTCTCCGGTTCCTTTTTTGTTTTTAACTTTTTATTTGGGTGGTGTTGATTCAGTTAGGGGGTGGAGGCTCCTTAAATTGTGAAGTGATTGCCTCTTTAATGCGGATCATTTTTTTTTTCTGGATGCAGGATGGTAAGATAGAAGCAGAAGTTAAGCTTACTGGAATTCTTAGTGTAGGAGCTCTAATGCCCGGGGAGCAGAGGAAATATGGTACTACTATTGCCCCTAGTTTGTATGCACCGGTGCACCAGCATTTCTTTGTCACCCGTATGGACATGGCAGTTGATTGCAAACCAAATGAGGCCTATAATCAGGTAGGTTTGCTCATCCAAGAATCTTAGTTGTCCACATGCATCGGCTACTTCCAGTATGATATTGCTCCATGCCCTATTACCTTGTTTATTTTTTCGCATAAATTCATCGTAAGTAGTGAATTTCCCATGTAATTTTGAGTGGAGCTGTATTTTTAAATAATTAGATTTGGAGACTGTTTAGCACAACTCTAGCTCCAGGAATTGGAGCTCCACGAAACAGTTTTAGCTCCATCTAAAATGCGAGCAAGAGTTGGGTTAATCTCTCTCACAAAATAAATTAGAGATGTGGAGTTGAGTTTAGGTTCCTCCACATCTTCACGCCAAAGCCAACTCCTGAAGCTAAATTTAAGAGTTGAAACTCTACCAAACAGACCTTTTATATACACATACTACTATTAATCTATACCTTCTATATAGTTGGTACCCACTAAAAATTATTAGAAGCTAAAGATTAACATGCAAATATACCACATCATTACTCACTAGCAACTACTATTCTAGCCCATTTTAAATCCTATGCAAGCCTGCTACATTATCATCCACTAGCAACTTCAATTCTAGCCTATTTTAAATTCCATACAAACATGACACATCATATACAATATTATATAATATTATATTGTAGAGATCAATATTATTTTTTGAAATAATATTTTCATATATTATTTTTTCGATATTTCAAATTTTATTAATTATACAATATTTATCATATACTCATCCATAAATTCGGCAGCAAAGCGCGGAATATCACCTAGTTAATTTTTATATGTTTTACATACAACACTTAGCTTATTCTCTGTGCAATACATTTTCAAAGAAGACTATTGAATTTCATATACAACTTTCAACTTATCTTTAAATCGATCTACACCATTGTAGTCTGGGTCAAATACTTAAAGCTGATCAAAGTATTTTGTCTTTCTTTGATTAACGTGAATATTTCTAAGCATCTCGAAGGGACGTGGTGATTTTTGTTTTTCTTTTAAAAAAAAGAACTAATCCCTCCGTTTTATATTATAAGTCGTCTAATTTTTTTTTGTCAAACTTCTTTAAGTTGGATAAAATTTATAAAAAAAATATACCAATACTTTTAATATAAAACAAACATATTATCAAAAGTATAATTTAATGTTAAGTTTAATAAAACTAATTAACTTGGTCAAATATAATAAAGTTTGACTATAAAAAAGTTAAATGACTTATAATATGAAATGAAACAGAGGGAATAGTATCTAAATAAATACAGCAGATTACTTGTCTACATTATGCATAAACATGCTCTAAGCCGTTTTTTCTTTTCTGAAAAGTATTCTAGTCTACTATAAGTCTTGGAGACTTCGTGGAGGCCTGCATTTCATTGCATTATCATCTGGTACGATTTTCATAATTAACAACGTTGCTTCCCTTTTCATCTCACAGGTGGTAGAGGTAAACGTCAACGCGGAATGTGCAGGACCAAATAATATGCATAATAATGCATTTTACGCGGAAGAAAAACTTTTGAAATCTGAACTACAGGCCATGCGTGATTGTCACCCTTCATCCGCACGTCATTGGATTGTAAGAATGTGGGAGAGAAGCATTGTATCGTTCTTTTATAATTCACTAGCTACTGTGCATCGTAATTAGTGGATTTTCCGTACTACTAGAAAAAAATATTTTTCCAGGCGGGCCAATCACGTTTTCGTAGACGGGCAAGCCGTCCGTCTGTAACTCAACACCTGTAAAAATAGTTGATTTTCACAGGCGTGCAACTGGTCTACTTGCGAAAATAGCTTCCAGCGCTAAAAAAAATGGGCAGCCACCGCTGTTTACGGCGGTAGCTTCCCGTTCCCAATTTAGTTCCCACCCATTCCCCATCCAATCCAGTGAATTCAAAGTCAACAGAGAAGTCACCTGTTCATCCAAAATAAAGCTTCACATGCACCAGCCATATTTCAGTTTCACAAGAATCAATTCTAGCAAAGAAAGCAAACAAAATCACATGTAAAATCATTACTAAAATATAACGGCCGCCGCTCTGCCATCGTCCGCCACCGCAGCCGCCCTCCGCCGCCACCGCCCGCCGCCGCCTTAACCCTCCTCGCTGCCGTCGCCATGTCTGACGAGAGAGGGAGGGGAGCTCCGACGGCTACCGCCCTCTCCCCGCCCCCCCAGCCAGAACTGGGAGGCAGGGGCCAGGAGCCATCGACCACCGCTCTCCCCTCGCCCCCCTTCTGGCCAGATTTAGGAGGGAGGGGCTGGGAGCCGCGCCGCCTCGACCCTCCTCGCTGCTGCCGTCCTTCACCGCCACCGCCCGCCGCTGCCGCCGGAAGCACACACCGCCACCGCCGGTAGCCGCCGCCGCCTCCGGCCAGCGTCCGAGGAGAGGATGAGAAGTGAGGGGAGGGAAGAGGCCGGTGAGAGGAGAGGTGGAGGGGAGGCCGGGAAGGGGAAGGGGAGGGACGCTCGAGACTTAGAAAAAATCTAGCTATTGTAAGCCTATTTTCGCAGCCAGACCACACAAGATTCATCTGCGAAAATCATTTTCGCAGGCGCCGCTTAAATGGTCCGCCTGCGAAAGTAGATTTTCCCAGGCGGACAGTAAATTTCACCCTGATTTATTTTTTTATGGCGGTTATTTGGCTCCAAGGGTCATGTCCGCCTGCGAAAAAAAGACCTCCATGTAGAAAAAATGCTTTTTCTAAGTAGTGCCGTACGTGCAATTTTGTGTGGAGCTATATTTTTAAATAATTGGATTTAATATACACATACAACTTTTTTTTTATTTTTCTATATACAACATTAGCTTATTATCTGTACAATACTTTTTAAAAGAAGATCCAAATTTCATATACAACTTTCAACATATCTTTAAATCGATCTAAACCTTTGTAGTCTGGGCCTACTACGAAAGACCGATCAAAGTATTTTTGTCTTACTCCGATTAGTGTGAACATTTCTAAGCATCTAGAAGGGACGTGGTGGCTTTTGTTTTTCTTTAAAAAACTAGTATCTTAATAAATACAGGACATTACCTGTCTATATTATACGTAAACATGCTCTAAGCCGTTTTCTTCTTTTCTGAAAAGCATTCTAGTCTACGCAGCTAAGTTCGGCAGCATGACATTGTGGGTTTGTTTGTTTCGTTTTTTGTGCGCACGTTTTCCGAACTACTAACTGTGTATTTTTTTTTAAAATTTTCTATAGAAAAGTTACTTTAAAAAATATATATTAATCTATTTTTAAAATTTAAAATATTTAATACTCAATTAATTATGTGCTAACGGCTCACCTCGTTTTTATGTATTTTCTCGATCTTTTCAATCCGCTTCTTCTCAAACTCAGCAAGTGTCTGAAACTTGCTTCGTGAAGGCCTGCATATTTGGGCCAGTTAACTTGCACCAAGGACGATGTGGATCTCAAGCTTTCTGTACTGTGCCCTCTTGCATCGATACATGTGGATCTGAGACTTTTTGGGACACTGCTTTATATTCCCTCCGATCTATTCTATAATATACTCCCTCCGTTTCAACATATTTAACGTGGTTAACTTTTTTAAATATGTTTAACCGTTCATCTTATTAAAAATTTAAGTAATTATTAATTTTTTCTATCATTTAATTCATTATTAAATATACTTATATGTATACATATAGTTTTACATATTTCACAAAAGTTTTTGAATAAGACGAATGGTCAAACATATGCTAAAAAGTCAACGGTGTCAAATATTTAGAAACGGAGGGAGTATATTATATGACTATGTTGATATTTATGTGTTATTTGATTATTCATCTTATTAAATAACAACTGTATAAATGTGATTTGTTTTGTTATGACTTATTTCATTATAAAAAAACTATAAAATTAAACTATATTTTTACATATTTACACGGAATTTTTGGATGAAACATATGGTCAAATATTACGAAAAAGTCAAGGGCATCGTATATTATAATACTGAGGTAGTATACACGCACGCTGATACACTGTTTTATGCACGTTGATCAGGTAAGGAACACAAGGACTGTAAATCGTACTGGACAACCAACAGGCTACAAGCTCATACCTGGTTCAAACTGTCTTCCGTTGGCCCTGCCTGAGGCGAAATTCCTGAGAAGAGCTGGATTCTTAAAGCATAATCTTTGGGTTACATCATACAAAAACGATGAGATGTACCCTGGAGGAGAGTTTCCTAATCAGAACCCACGAATTAATGAAGGTTTAGCAACATGGGTAAAACAGGATAGATCCCTAGAGGAAACCAACATAGTTCTCTGGTAAGTTGTCACCTCCTAATAATTGCTATAATAGAAAAATATGTAGTGTAAACTCCATGTACAATGTAAACCTGAAAATAAATGTCTAAGATTTGTCCATGTTATCTTTGGTAACTTTTTTACTTCCAAGTTTAACCATTGAGTAAACATTTGTACTAGGAATAAAAAAACTTACTTATGGTGATGTGAATAAATGTCCATTTGTGTATCCTAAGTATACATATTTTTCCATCTATAATGGCATGACTAATAAAACACATGTTTTGCAACTGCAGGTACGTTTTCGGGGTTACCCATGTCCCAAGGCTCGAAGACTGGCCTGTAATGCCAGTGGAACACATCGGCTTCATGCTGAAGGTACAAGTTCAGCCTAATTGGTTTCTTTTCTGCTTTATTCACTGCATGATTTCGATTAGCTTCTGTTTCGAATAGATAGTTTTCTTGTCGTACATTGCTCCAGATAACATTACAACTCTGAACAATGGAACCCATATTGTTTTGGTTATACTCCAGCCAGATGGATTCTTCGACTGCTCACCTGCGATCGACGTGCCTCTTGGATCTGAAGTACACACAAAGAATGGGTGGATAAATTATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015661

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