Os12g0639600

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Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0639600| Description = Soluble quinoprotein glucose dehydrogenase domain containing protein| Version = NM_001073922.1 GI:115489805 GeneID:43...")
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Gene Name

Os12g0639600

Description

Soluble quinoprotein glucose dehydrogenase domain containing protein

Version

NM_001073922.1 GI:115489805 GeneID:4352918

Length

4837 bp

Definition

Oryza sativa Japonica Group Os12g0639600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27656700..27661536

Sequence Coding Region

27656843..27656948,27657049..27657212,27657712..27658500,27658590..27658806,27659405..27659583
,27660560..27660801,27660934..27661321

Expression

GEO Profiles:Os12g0639600

Genome Context

<gbrowseImage1> name=NC_008405:27656700..27661536 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27656700..27661536 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgcgccgccgcgggctcctcctcgtcttcgtcgtcgtctgcttcggcggcggcggctggctccttcccgcctcccgtgccatgccgctatgcacggactccaggcctcccgtggcgctcaacaagacgctcgccttctgcgcctacgcccgggggagcagcagctgctgcgacgccgccgcagacgctactttgcagaaacagttcgatgccttcaacgtctccgacgcctcctgcgccgccctcctcaagcccatcctctgcgcgaaatgcaatccgtattctgctgagctgttcaacgccggcccaaacattcggactatccctttcctgtgcaactctacctcatcctcttctgctcaatcaaaggactccacacaagactactgcaaattagtctgggaaacttgcaaagatgtgaccatatccaactccccctttcagccaccgcttcaaggcggcgcgccacttcccacttcatcatccaagcttactgatgattggcagtctgaagctgacttctgcaaatcatttggcggtgcgcctaacgaccaatctgtttgcttcagcgggaactctgtctcatttaacaccactccaccttcgccctctctgaaagggatatgcctagagaggataggcaacggatcataccttaacatggctcctcaccctgatggctccaatagaatcttcttaggcagccaacctgggaagatatggttggcaacagttcctgaccagggatctggaggcatcctgcagtttgatgagacaagcccatttgctgatctaaccgatcaggtgcatttcgattcgcaatttgggctcatgggcatggcatttcatcccaattttgcaaccaatggccgcttctttgcctcttacaactgtgataggacaaagtcacccagctgttctggtaggtgctcttgtaactctgatgtcggctgtgatccctcaaaggttggcacggataatggcgctcaaccatgccaatatcaagttgttgtatcagaatattccgctaaaggttcttcagcaaatatttctgaggttacgtctgctgatccatccgaagtcacaaggatatttaccatggggctgccttatacgtctcagcatggaggtcagatcctctttgggcctactgacggatatctctacctcatgatgggggatggtggaggaaagggggacccttttaatttctctcagaacaaaaagtcgcttctgggaaaaattatgaggcttgatgttgataatccaccaagacagagtgaaattgctaaccagagcttgtggggtaactactccattccaaaagacaacccatacactgatgacagtgacttagaaccagaagtttgggcattgggtcttagaaacccatggagatgcagctttgattccgcgaggccttcctacttctactgtgccgatgttggtcaggatcaatacgaagaagtagatttgatctccaagggtggaaactatggatggcgtgcatatgaggggccacttgttttcaatccaccttcggcacctggagggaacacttccctcaattccataaacgccattccccctatcatgggctacagccattctgatgtcaacaagaagattggatctgcgtcaataataggtggtaatgtttatcgaggatctaccgacccctgcttggtcggaaggtacctatacgccgatctgtatgcatcagcgatgtggaccggcacagaggctccagagagcagcgggaactacagctcgagtctgatctccttcagctgctccaagagttctcctatagcgtgtgacactgctgctggaagccccctcccatcacttgggtacatatactcgtttggcgaggacaacaacaaggacacctacgtcctgtcgagcaagggcgtctaccgggttgtgcggcccagcctctgcggctacacctgtccaacagagaaacctgcgacgaacactgggacgacgacgccttcgtcagcggcatcagtgacaggcaagcagatgatgggagcgcttctgctgtcggttcttatgttctgggttttggtaagatag</cdnaseq>

Protein Sequence

<aaseq>MLRRRGLLLVFVVVCFGGGGWLLPASRAMPLCTDSRPPVALNKT LAFCAYARGSSSCCDAAADATLQKQFDAFNVSDASCAALLKPILCAKCNPYSAELFNA GPNIRTIPFLCNSTSSSSAQSKDSTQDYCKLVWETCKDVTISNSPFQPPLQGGAPLPT SSSKLTDDWQSEADFCKSFGGAPNDQSVCFSGNSVSFNTTPPSPSLKGICLERIGNGS YLNMAPHPDGSNRIFLGSQPGKIWLATVPDQGSGGILQFDETSPFADLTDQVHFDSQF GLMGMAFHPNFATNGRFFASYNCDRTKSPSCSGRCSCNSDVGCDPSKVGTDNGAQPCQ YQVVVSEYSAKGSSANISEVTSADPSEVTRIFTMGLPYTSQHGGQILFGPTDGYLYLM MGDGGGKGDPFNFSQNKKSLLGKIMRLDVDNPPRQSEIANQSLWGNYSIPKDNPYTDD SDLEPEVWALGLRNPWRCSFDSARPSYFYCADVGQDQYEEVDLISKGGNYGWRAYEGP LVFNPPSAPGGNTSLNSINAIPPIMGYSHSDVNKKIGSASIIGGNVYRGSTDPCLVGR YLYADLYASAMWTGTEAPESSGNYSSSLISFSCSKSSPIACDTAAGSPLPSLGYIYSF GEDNNKDTYVLSSKGVYRVVRPSLCGYTCPTEKPATNTGTTTPSSAASVTGKQMMGAL LLSVLMFWVLVR</aaseq>

Gene Sequence

<dnaseqindica>144..249#350..513#1013..1801#1891..2107#2706..2884#3861..4102#4235..4622#gcagctcgcaccagcacaagtcaacagttgagctcctccatccacttgactactcctacttgagagagagagagagatagtgccattgccactgcatccaccattcaatctcacacctccgggctccggcaagggagacagagatgctgcgccgccgcgggctcctcctcgtcttcgtcgtcgtctgcttcggcggcggcggctggctccttcccgcctcccgtgccatgccgctatgcacggactccagtcagtctagtcacttactacatttgaatgaatgagaatgatgatactagctagtgtagtgtgcttgctcaatcaaggatcttcttgctcttccctgcagggcctcccgtggcgctcaacaagacgctcgccttctgcgcctacgcccgggggagcagcagctgctgcgacgccgccgcagacgctactttgcagaaacagttcgatgccttcaacgtctccgacgcctcctgcgccgccctcctcaagcccatcctctgcgcggtaccctcctcctttccctgctttttactttcctcacctcacgctcacagagggccacgccacacacctgttcgccgctttgcctcactggaatggataacctgctccagatttggcttgccttgtcttttccttttcagttactatactagtactgtattattcattcatgtcaaaaaaaaaacagagatactgataatccaccactagttcaacttcacttacaatttaactgagcttcttttctttcatgttatcaagttgattcactgccatatcaaattgcctcaccactaatatctcatctttctaacatgttactacaaagataccaccttccgtaatgtatcatataagagtgcagcaattctttcaatttatttgaatttatgtatcaaataaattgaagagagtatctgtaattgaagataccaccttcatgtaattacagatactttctttaatttatgtatcaaatttccctctcttccattttcagaaatgcaatccgtattctgctgagctgttcaacgccggcccaaacattcggactatccctttcctgtgcaactctacctcatcctcttctgctcaatcaaaggactccacacaagactactgcaaattagtctgggaaacttgcaaagatgtgaccatatccaactccccctttcagccaccgcttcaaggcggcgcgccacttcccacttcatcatccaagcttactgatgattggcagtctgaagctgacttctgcaaatcatttggcggtgcgcctaacgaccaatctgtttgcttcagcgggaactctgtctcatttaacaccactccaccttcgccctctctgaaagggatatgcctagagaggataggcaacggatcataccttaacatggctcctcaccctgatggctccaatagaatcttcttaggcagccaacctgggaagatatggttggcaacagttcctgaccagggatctggaggcatcctgcagtttgatgagacaagcccatttgctgatctaaccgatcaggtgcatttcgattcgcaatttgggctcatgggcatggcatttcatcccaattttgcaaccaatggccgcttctttgcctcttacaactgtgataggacaaagtcacccagctgttctggtaggtgctcttgtaactctgatgtcggctgtgatccctcaaaggttggcacggataatggcgctcaaccatgccaatatcaagttgttgtatcagaatattccgctaaaggttcttcagcaaatatttctgaggtttgctcatctggacaccctcctcgattcatgtctggttattcctcatactccattcatgcacattcttcagttttcacttttgtcaggttacgtctgctgatccatccgaagtcacaaggatatttaccatggggctgccttatacgtctcagcatggaggtcagatcctctttgggcctactgacggatatctctacctcatgatgggggatggtggaggaaagggggacccttttaatttctctcagaacaaaaagtcgcttctgggaaaaattatgaggcttgatgttgataatccaccaagtaagtcttccagagggccatcttttgtcatttgttgattgatttatccattcagaactgctttcctgtattctcttcagattccatgtttgtgtctctatcgctgctctttttttttcccatcttatttattttagttctaaatgttggcatcagaactacaaaacaaaatggcaatcgtgactcctaatcaccaccttcagtgttgtttcaataattttctctcttctgggccaattgtgttcaataaataaactactactgggcacattttaaagaatggcttagtcaaagatgctgaatggtgagtacaaatcttcttcgggatcttcaaactggcagtattatcattccatatgaaaatattaggttacgttgttcatatggtcatagtttaaaccttgtagacgattgacacctgtcaatataaatttaaaacccagtattttgtaggataaagataaactagtttctattgccagtgcaagtagtttgtaagataaacttaaatctcctctcacataagacaaacaattagcaatatatggagcatcagcatgtactatatttgataatttgttccttttttcctttacaggacagagtgaaattgctaaccagagcttgtggggtaactactccattccaaaagacaacccatacactgatgacagtgacttagaaccagaagtttgggcattgggtcttagaaacccatggagatgcagctttgattccgcgaggccttcctacttctactgtgccgatgttggtcaggtaacattcagcattatatgagcaactcatgataatttgctactttttaatttaatactattggttaacaattgattcagtaaagatagtggttcttcatcagtttttctttttaaggaaattgcccattttactccataaagtatggtatcagtctacctagccccctaaaccttttcccgttcagtaatacccctaaactgcttttacctgagaggctagtcttggatgttggttttaccatcttggccgcctcgccatcaggctttgccacatcggctgtgctgtgctgacgtgatgccaagtggaaaaagtaggtatgtggaagatatggtggcaaaagtcaaaaccatctttgagacaagtcttagtggcttagaaaataactcaaggggtttggtggaccaagcagtagttcaggtttaggggagtatattggaatttgtcatgccctttaaggttggttttttgttagttgggtatccttgaccttgagggctgcattacttctagtcatcatcgaggaacctgataagcacactgaaaagtgtaggtatagctatgtaatctagtttgatcatgaacttaaaatattctgaacttgataggcatttacagataaaggcataaagacaggatagatacgtagcagacagaagcctattattcattgtgctgatataaaaagacgcgaatattagggaatgacctaatatcaaataattagaagaggtgaagcttcgaatccaggtcgtttctcattaatattgtgccgatattaatggaactcaactgttcattctccagacttcacatttagctctcttctttctttttctgaaggcaagcttttgtatttctaagacatacagaacttaatttcatcaaatttggtaaaattgtcaagatatgtgaccactatgtgcactttgcatgcagtacatcatttgcatttttgaccttaatctgtgtataggatcaatacgaagaagtagatttgatctccaagggtggaaactatggatggcgtgcatatgaggggccacttgttttcaatccaccttcggcacctggagggaacacttccctcaattccataaacgccattccccctatcatgggctacagccattctgatgtcaacaagaagattggatctgcgtcaataataggtggtaatgtttatcgaggatctaccgacccctgcttggtcggaaggtacatattgctttattttggaacttaaagatggccttgaactagtagtatcttgtgcagcagcagcagcagcgaaaaatcttgaaatttgcatatcacaacaagaagatgtctttgtcaatgtgttttcaggtacctatacgccgatctgtatgcatcagcgatgtggaccggcacagaggctccagagagcagcgggaactacagctcgagtctgatctccttcagctgctccaagagttctcctatagcgtgtgacactgctgctggaagccccctcccatcacttgggtacatatactcgtttggcgaggacaacaacaaggacacctacgtcctgtcgagcaagggcgtctaccgggttgtgcggcccagcctctgcggctacacctgtccaacagagaaacctgcgacgaacactgggacgacgacgccttcgtcagcggcatcagtgacaggcaagcagatgatgggagcgcttctgctgtcggttcttatgttctgggttttggtaagatagaaactgcaaaaataagcctcttgcactgttagctagtactcctatataagtcatgatttgagtcctgatgcacccctcctcactcttttttcctttttcctttgtctgaacaatctcactgtcttgataaccgtatgtaaataatcagtatttcagttatgcaagagagggttgcatcattatcaaggtgaatgaagtttatttcatcatacagt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0639600, RefSeq:Os12g0639600