BGIOSGA015688

From RiceWiki
Revision as of 04:17, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015688| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015688, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015688

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015688, complete gene.

LocusTag

OSJNBA0020P07.8

Ensembl Transcript ID

BGIOSGA015688-TA

Ensembl Protein ID

BGIOSGA015688-PA

Length

3873

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1208365..1212237

Sequence Coding Region

1212132..1212237,1210959..1211071),complement(1210581..1210813,1208800..1209027),complement(1208365..1208422

Genome Context

<gbrowseImage1> name=IndicaChromosome04:1208365..1212237 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:1208365..1212237 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGCCCGTGTTCGTGGGGAACCTCGACTACGACACCCGCCACTCCGAGCTCGACCGCCTCTTCTACCGCTACGGCAGGATCGACCGCATCGACATGAAGTCAGGATTTGCTTTTGTCTACTTTGAGGATGAGCGTGATGGTGATGAGGCCATACGAGCCCTTGATGGCTATCCTTTTGGCCCTGGGAGGCGCAGGCTTTCGGTGGAGTGGTCACGGGGTGATCGTGGTTCCAGGCGTGATGGCTATAGCAAACCACCTGTGAATACTAAACCCACGAAGACACTATTTGTCATTAACTTTGACCCCATCAACACCAGAGTCACTGATATCGAAAGGCATTTCGAACCATTTGGAAAGCTTTCGAATGTTCGGATCAGGAGGAACTTTGCTTTTGTGCAGTTTGAAACACAGGAAGAGGCCACAAAAGCACTTGAAGCTACTCATTCTACCAAGTTGTTGGACAGGGTGATTTCTGTTGAGTATGCCTTCAGGGATGATACAGAACGAGGTGACAGGTATGATGGTGCAAGAGGTGGCTATGGTAGGCGAGATGATAGTCCATATCGTCGATCAGTTAGTCCAGTGTACAGGTCACGCCCAAGTCCTGACTACGGTCGTCAAAGGAGTCCTGTGTACGGTTCGTATGACAGGAGTCCTGTTAATGATCGCTATCGAAGCCGATCTCCTGTCCGGCGATCAAGATCCCCACTTGCCAACAGAAGAGCTTATGATTGA</cdnaseq>

Protein Sequence

<aaseq>MRPVFVGNLDYDTRHSELDRLFYRYGRIDRIDMKSGFAFVYFEDERDGDEAIRALDGYPFGPGRRRLSVEWSRGDRGSRRDGYSKPPVNTKPTKTLFVINFDPINTRVTDIERHFEPFGKLSNVRIRRNFAFVQFETQEEATKALEATHSTKLLDRVISVEYAFRDDTERGDRYDGARGGYGRRDDSPYRRSVSPVYRSRPSPDYGRQRSPVYGSYDRSPVNDRYRSRSPVRRSRSPLANRRAYD</aaseq>

Gene Sequence

<dnaseqindica>1..106#1167..1279#1425..1657#3211..3438#3816..3873#ATGAGGCCCGTGTTCGTGGGGAACCTCGACTACGACACCCGCCACTCCGAGCTCGACCGCCTCTTCTACCGCTACGGCAGGATCGACCGCATCGACATGAAGTCAGGTCTGCCTTTGCCCTCCTCTCCACCTGTCTTCTTTTTTATTTCCCCGTGAATTATTAGATCCGGTTTGGTGCTCATATACGGCACCGATTTGTTAATCTCCTGCGAGATTGCGAGTCCATGGTGTCTAATAAATTTTCTTTTCTTTTCACCCTAGAGAAAACAAGAGGTTCTTTTCCAACTTTGAACTGTTCTTGGTTACCACTCTCATGTTTATGATATGTTTTCACAATAATAATCTTTAGTAATTTACCAAGAATAACCACCCAAGCATGTCGATGTGCTTTATGTTAAATATGTTTTGTGGAAGCAATTAGGATGTTTAAGATTAGCTTGTCGTCGTTACATCTGTAACATCCAACGGCGTGGAACACATAAATTGTGCATATGTATGATGGTCCATGCCCATGTAGCCGCAGTTGCAATATATGTACAGCAGGAAGCAAGATGTTTTAAATGTTTACTCTGGCGCAGGAACTACAGAGGCAAAACTCAACTCCTGAAACACCCTCCATGCACTCATGCCGGCCATCCCCTTCACTTGACCATCCATTACATGACGCGCGCTGTTTACTGTTGTTACCACTGCCCGAGCATGTTTAGCGGGGACTGGCACCATCATGTGATCCATGCCGTGCCGTCAGTTCCATCATTCCATACCATGCCATGACTAGCAGTATCACCATGCCATCCTCCCGGCATCAACATCACAATGTTCTGTGCGTGCTGTCTCAATAAGCAATGCCTGTGAGATTGTTCTGTTATTGGTGAAGCACTCTCAGTATCTCCTGAGTCGTATCGTCTTACTTTGGATATAAGTTATTACAACATCATGCTTAGCTCTGATCCATCAATGGAATCTACCAATAACCACACTAGTGCTCTTCATACCATCAGATATTTTGCAGGTGCAGTACTCTTCTGTTCTTATTAGGTCTGATTGAACGGGGATTGTGTGTTGAGTTGTTTATCATAAAGGAAAACTGGAAATGCTTGCACCTATTGGCGCAAAGACATTATTTATTTTTTCTCTGTTCTTAATTGTGTTTACCTTTTCTTTAGGATTTGCTTTTGTCTACTTTGAGGATGAGCGTGATGGTGATGAGGCCATACGAGCCCTTGATGGCTATCCTTTTGGCCCTGGGAGGCGCAGGCTTTCGGTGGAGTGGTCACGGGTAATTTCTCTTGCTGTTCTTGTCACCACCTATAACCCTGAAAAAATTGAAACATGTTTTACTTACATGTTGAGAGTTTTGTTGTTTAATTTAGTCGGTCTTTAATGTCAAAGTATTGCATTCGTTATTATGGCCTTTATTACAGGGTGATCGTGGTTCCAGGCGTGATGGCTATAGCAAACCACCTGTGAATACTAAACCCACGAAGACACTATTTGTCATTAACTTTGACCCCATCAACACCAGAGTCACTGATATCGAAAGGCATTTCGAACCATTTGGAAAGCTTTCGAATGTTCGGATCAGGAGGAACTTTGCTTTTGTGCAGTTTGAAACACAGGAAGAGGCCACAAAAGCACTTGAAGCTACTCATTCTACGTATGAATCTGATTCACCTCTTCTTAACCTTGTTGAGATTCCTTATGCGAAGTTACCAGATTTCCTTATTTGCCATGTAAAGTTACGTGAATTTTTTGTTTGCCACTGAGAGTTGTCTCTTCCTTTATTTGCTACCTTTTCTCAATTGCTCCCTTATTTGCCACTCATGGTAATTTTCTGTTAGAGGGTTGTTAATGGTGCATATGCAAAGTCTACCTTTCTTCGCAACCCGTTCAGAATTTGGATATAACAAAAAAAAAAAACATGGCATGTGGATCCCACTGCTTATAGAAAAATGAACGAGCCAAATCTGTTGCACGTGGATCTTCCTAGAGTTTCCCTCAACTGCAACCATGCCGCTGTTGCCAAATCTGTCTGGTGGTCCGGCCAACAAAACATGAACCCTTGAACCATAGTGGTGCTATATATCTAGTTCCTCTTCGAAATACCATATGTGGTAGATCGGTGGCCCAACATGTACTGCTGTTTGCAGTTTGTTGGTACAGATTACAACTTGCAGTAGTAGAAACGTTCCATGGTGGGGGCTGCTCGGTGGTTGCCATGGACATGGTGATGGTGCTTGCCCTCAAATTCCATGCAGCCATGGGGATCCTGAGTAGCAGCTTTTATATTTGGGAGGTAGTGCTGCCGGACTCATGCTATGGTTGCTCATAGTGCCGGGGAGGATTCTGGGCGAAGACCGCCGTGGAGGGTGGGGAGGAAGGTTTCTGCTTGAGCTGATGGGAGGGAATGAGGAAATAGCATAGGAGCAGCTACTGGCTTGGATGTAGATTGGGTAATACGGGAGATAGTTGGATGTAGATTGGGTAATACGGGAGATAGTGAAGTTAATTAAAGGACTCCTGTTTGCGAATATTCGTCAGTTTTGACTTTTATGAATATGATTTTGACCATTAATTTTTTAATTAGGTAATACAAAAGTGAATAGCTCTAAATGTACAATATTAGTAAAGTACTTCTGATCACAAATCTAACAACACCAATTTGATACAATAGTTATATAATTTGAAAGGTATAACTATAGAAAGCATGATTAGTCAAAGTCAAAACTGACAAGTATTTGTGAACGGAAGGAGTATCTTTTGGTAATTCCTAGGATATGCCAAAAACAGAGAAACGTTAATGGTATTGAAGGCATGTAAGGGTCACAATTTCATATGGTTGTCGCAAGGGGACAATCAATTGTCGCTGACAAATAAGGAAATTGGATAACTTTGCATGGCAAATAAGGAACTTTCTCAAGCTTATATAGGATAAATGAAATTTCCACATAGGCGCTTCATTGATTATTTTGTTTCTGACGTGCATGGAAAATTAGCAGATATTGCTTTAATTGTTCGATTCAGTTAGGAATGTTACTATTCAATCATTCTTCTAGTCTTGCTTAAAACACAACAGTAGAGGCACACAGCTACCCAGTTATGCTGCTTCTGAAATCTATGCAATTCTGTACACACTAATGATTTTGATATTTTTGAAATTATTGTAGCATGTAACCAATATGCCTTCTGTATTTTTCCTTCTGTCTGCAGCAAGTTGTTGGACAGGGTGATTTCTGTTGAGTATGCCTTCAGGGATGATACAGAACGAGGTGACAGGTATGATGGTGCAAGAGGTGGCTATGGTAGGCGAGATGATAGTCCATATCGTCGATCAGTTAGTCCAGTGTACAGGTCACGCCCAAGTCCTGACTACGGTCGTCAAAGGAGTCCTGTGTACGGTTCGTATGACAGGAGTCCTGTTAATGATCGCTATCGAAGGTATGTCCTTCATACATTCATTTAAGTAGTTCCTTGGATTGCACTATTTATGCTTGGGGATGTTATGTTATGCTAGGAGCAGCAGTTCTCTAAGCAAATATTTTCTTGAGGACACCAGAACATTTATGTTACCTAAGCTAGTCAGATTAACCACCCCACTTCACATTTTATGTTATAGACATGGACTGCACCTTGTTATTATGAATTAAGTCCTGAAATTACTAGTATTTTTTAATCACACAATCACATTTGGGTGCTCTTGGAGCACACTTTGGCCTGGGCCCTGGCACTATTTACAATAAATATCGATCAATTATAACTACAACTGCAAAATATTAATTCTTCGTTTGTTTTGTATTATTTGTCTATAATTGCAGCCGATCTCCTGTCCGGCGATCAAGATCCCCACTTGCCAACAGAAGAGCTTATGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015688