Os12g0640700

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Revision as of 10:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0640700| Description = N/apple PAN domain containing protein| Version = NM_001073928.1 GI:115489817 GeneID:4352924| Length = 1707 bp| Defi...")
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Gene Name

Os12g0640700

Description

N/apple PAN domain containing protein

Version

NM_001073928.1 GI:115489817 GeneID:4352924

Length

1707 bp

Definition

Oryza sativa Japonica Group Os12g0640700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27702048..27703754

Sequence Coding Region

27702049..27703629

Expression

GEO Profiles:Os12g0640700

Genome Context

<gbrowseImage1> name=NC_008405:27702048..27703754 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27702048..27703754 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gggatcggctacttcgccaacaagttcgcgtcgccggacacctccggcgaggagctcccggcgtgccgcaacctctgctcggccaactgctcctgcctcggcttcttctacaggaactcctccaagtcttgcttcctgctgaactaccggatcggctccctcttccgcggcgacagcgacgccgccgtcggcttcatcaagacgttgccgccggcgtcgcgtcgccagggcggcggcaagggctcgtcgctcagctttataaccatagtgttcggcatcgcgctgccaaccgtggcggccgtgctcatcggcttcgtcgtgtacgtgatgtgggtgaagagccggcaggccagcaacaagaagaagaagaagaagcagggcggcagccgcagctggttcaagctgccgatgctgtcgtcgcagcaggcgtcgtatgcgagtgaggagcagcagggcgaagaagacgacggcgacggcgacgaggttctcatccccgggttgccggcgaggttcacgtacgcggagctggaggaggcgacggaggggttcaagtcgcagatcgggtcgggagggttcgggtgcgtgtacaggggcgagctcacagacccagagcggagcgcggtggtggcggtgaagcggatgaacaaccttgggtcgcaggggcgacgcgagttcctgacggagatggcggtgatcgggaacgcgcaccacgtgaacctcgtcaagctgcgcgggttctgcgccgagggcgcgcggcagctgctggtgtacgagtacatgaaccgcgggtcgctggaccagtgcctgttccgcgccgccgccgccccgctggagtggccggagcggatgggcgtgtgcgtgggcgcggcgcgcgggctggcgtacctgcacgccggctgcacccgcaagatcctccactgcgacgtcaagccggagaacatcctgctgaacgaccgcggcggagtcaagatcgccgacttcgggctggcgaagctgatgagcccggagcagtcggggctcttcaccaccatgcgcggcacccgcgggtacctggcgccggagtggctcaccaacgcgcccatcaccgacaaggccgacgtgtacagcttcggcatggtgctgctggagatcgtgcgcggcaggaagaactgcaggtcgggcaagggcagcggcggcgaggcttcgtcggactcggacggctacttcccggcgatggcgctagagctgcacgagcaagggcagtacgaggcggtggtggaccagcggctggaagggagggcggacgtggcgcaggtggagcgggtggtgcgcgtggcgctctgctgccttcacgaggacgcggcgctgcggccggccatgacgacggtgtccgccatgctcgacggcagcatggaggccggagttcccaggacggagctgctcgactacctgcgcttgtacggccgcggcctggtcgacgtccgctccggcctccatgctgcggggaaaggcggctccgacttcaccagcggcggcgccggcagcagcagctggtcgcccacgtcgtgcgtgtcggcgcagcagctgtcgggccccagatga</cdnaseq>

Protein Sequence

<aaseq>GIGYFANKFASPDTSGEELPACRNLCSANCSCLGFFYRNSSKSC FLLNYRIGSLFRGDSDAAVGFIKTLPPASRRQGGGKGSSLSFITIVFGIALPTVAAVL IGFVVYVMWVKSRQASNKKKKKKQGGSRSWFKLPMLSSQQASYASEEQQGEEDDGDGD EVLIPGLPARFTYAELEEATEGFKSQIGSGGFGCVYRGELTDPERSAVVAVKRMNNLG SQGRREFLTEMAVIGNAHHVNLVKLRGFCAEGARQLLVYEYMNRGSLDQCLFRAAAAP LEWPERMGVCVGAARGLAYLHAGCTRKILHCDVKPENILLNDRGGVKIADFGLAKLMS PEQSGLFTTMRGTRGYLAPEWLTNAPITDKADVYSFGMVLLEIVRGRKNCRSGKGSGG EASSDSDGYFPAMALELHEQGQYEAVVDQRLEGRADVAQVERVVRVALCCLHEDAALR PAMTTVSAMLDGSMEAGVPRTELLDYLRLYGRGLVDVRSGLHAAGKGGSDFTSGGAGS SSWSPTSCVSAQQLSGPR</aaseq>

Gene Sequence

<dnaseqindica>2..1582#ggggatcggctacttcgccaacaagttcgcgtcgccggacacctccggcgaggagctcccggcgtgccgcaacctctgctcggccaactgctcctgcctcggcttcttctacaggaactcctccaagtcttgcttcctgctgaactaccggatcggctccctcttccgcggcgacagcgacgccgccgtcggcttcatcaagacgttgccgccggcgtcgcgtcgccagggcggcggcaagggctcgtcgctcagctttataaccatagtgttcggcatcgcgctgccaaccgtggcggccgtgctcatcggcttcgtcgtgtacgtgatgtgggtgaagagccggcaggccagcaacaagaagaagaagaagaagcagggcggcagccgcagctggttcaagctgccgatgctgtcgtcgcagcaggcgtcgtatgcgagtgaggagcagcagggcgaagaagacgacggcgacggcgacgaggttctcatccccgggttgccggcgaggttcacgtacgcggagctggaggaggcgacggaggggttcaagtcgcagatcgggtcgggagggttcgggtgcgtgtacaggggcgagctcacagacccagagcggagcgcggtggtggcggtgaagcggatgaacaaccttgggtcgcaggggcgacgcgagttcctgacggagatggcggtgatcgggaacgcgcaccacgtgaacctcgtcaagctgcgcgggttctgcgccgagggcgcgcggcagctgctggtgtacgagtacatgaaccgcgggtcgctggaccagtgcctgttccgcgccgccgccgccccgctggagtggccggagcggatgggcgtgtgcgtgggcgcggcgcgcgggctggcgtacctgcacgccggctgcacccgcaagatcctccactgcgacgtcaagccggagaacatcctgctgaacgaccgcggcggagtcaagatcgccgacttcgggctggcgaagctgatgagcccggagcagtcggggctcttcaccaccatgcgcggcacccgcgggtacctggcgccggagtggctcaccaacgcgcccatcaccgacaaggccgacgtgtacagcttcggcatggtgctgctggagatcgtgcgcggcaggaagaactgcaggtcgggcaagggcagcggcggcgaggcttcgtcggactcggacggctacttcccggcgatggcgctagagctgcacgagcaagggcagtacgaggcggtggtggaccagcggctggaagggagggcggacgtggcgcaggtggagcgggtggtgcgcgtggcgctctgctgccttcacgaggacgcggcgctgcggccggccatgacgacggtgtccgccatgctcgacggcagcatggaggccggagttcccaggacggagctgctcgactacctgcgcttgtacggccgcggcctggtcgacgtccgctccggcctccatgctgcggggaaaggcggctccgacttcaccagcggcggcgccggcagcagcagctggtcgcccacgtcgtgcgtgtcggcgcagcagctgtcgggccccagatgacatgacacacacatttactactgttttttctttttcttgtgtgaatactactgtagattatacagaatattttccatgttgagctgctattgttgcaggcaaatcgctgcatatgattgatcgct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0640700, RefSeq:Os12g0640700