Os12g0640800

From RiceWiki
Revision as of 10:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0640800| Description = Similar to Serine/threonine-protein kinase PRP4 homolog (EC 2.7.1.37) (PRP4 pre- mRNA processing factor 4 homolog) (PR...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0640800

Description

Similar to Serine/threonine-protein kinase PRP4 homolog (EC 2.7.1.37) (PRP4 pre- mRNA processing factor 4 homolog) (PRP4 kinase)

Version

NM_001073929.1 GI:115489819 GeneID:4352925

Length

1518 bp

Definition

Oryza sativa Japonica Group Os12g0640800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27707734..27709251

Sequence Coding Region

27708011..27708199,27708283..27708357,27708483..27708646,27708752..27708866,27709111..27709251

Expression

GEO Profiles:Os12g0640800

Genome Context

<gbrowseImage1> name=NC_008405:27707734..27709251 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27707734..27709251 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gaggtactaaagaaatttggtcgcaatatcggacttaaactaactgctgtgagggcatattcaaagcagcttttcatcgccctgaagcatctgaaaaactgcaaagtgctgcactgtgatataaagccagataatatgctggtgaatgaggctaagaatgtgctgaagctctgtgattttggcaatgcaatgcttgctggaatgaacgaggttacaccttatcttgtgagccgtttctatcgtgcacctgagataattcttgggttaccctacgaccacccattagacatgtggtcagttggctgctgtctatatgaactttacaccggaaaagtcctatttccaggtccatcaaataatgacatgcttcggcttcatatggaactgaagggccccttccccaagaaaatgcttcgaaagggtgcctttacgatgcaacattttgaccaagatctcaactttcatgccactgaggaggatcctgtgactaaaaaggctgtgacaaggatgattttgaacattaagccaaaggatattggttccttgatttcaaacttccctggcgaggatccaaaaatgctatccaactttaaagatcttcttgaaaaaatatttgtcttagatccagaaaagaggataaccatatcacaagcacttagccatccatttatcactggcaagtga</cdnaseq>

Protein Sequence

<aaseq>EVLKKFGRNIGLKLTAVRAYSKQLFIALKHLKNCKVLHCDIKPD NMLVNEAKNVLKLCDFGNAMLAGMNEVTPYLVSRFYRAPEIILGLPYDHPLDMWSVGC CLYELYTGKVLFPGPSNNDMLRLHMELKGPFPKKMLRKGAFTMQHFDQDLNFHATEED PVTKKAVTRMILNIKPKDIGSLISNFPGEDPKMLSNFKDLLEKIFVLDPEKRITISQA LSHPFITGK</aaseq>

Gene Sequence

<dnaseqindica>1053..1241#895..969#606..769#386..500#1..141#gaggtactaaagaaatttggtcgcaatatcggacttaaactaactgctgtgagggcatattcaaagcagcttttcatcgccctgaagcatctgaaaaactgcaaagtgctgcactgtgatataaagccagataatatgctggtatgatatctggcttgccatacttcttttctcacactagcatttgctcttgttttttggccattcggttttgtagaagttttgtcactatctacataaaaaaaaccgctatctggaacatggcaattttgattcctgtggatattgaacatgcttgaatatttttatttatgcttgttatatactacagtcattgtatctacagtaaacatcctttttaattttttgtcttgatattctttaggtgaatgaggctaagaatgtgctgaagctctgtgattttggcaatgcaatgcttgctggaatgaacgaggttacaccttatcttgtgagccgtttctatcgtgcacctgagataagtgagttccttttctcgcacttcattttgttgtgtattcaatattcttcctactgttattctgtctccatactacatgtggtctgatgcacaatttttcttgcagttcttgggttaccctacgaccacccattagacatgtggtcagttggctgctgtctatatgaactttacaccggaaaagtcctatttccaggtccatcaaataatgacatgcttcggcttcatatggaactgaagggccccttccccaagaaaatgcttcgaaaggttcttcatcattttcaaatctcttcttaccttcaaggaaacaatctacttttgatatttacatctgcaacagttgctaagtgaatatacaaatactttctaaggaattgttcccaattttgcagggtgcctttacgatgcaacattttgaccaagatctcaactttcatgccactgaggaggatcctgtgactaaaaaggtgtctatgcaaccatgttctcaaatactctgtttgagtgcattgttatggattatcttaacttattcttctttttcttgcaggctgtgacaaggatgattttgaacattaagccaaaggatattggttccttgatttcaaacttccctggcgaggatccaaaaatgctatccaactttaaagatcttcttgaaaaaatatttgtcttagatccagaaaagaggataaccatatcacaagcacttagccatccatttatcactggcaagtgaaaagatgttgattactcttggcattgctaacttagcataccttgtaaactacattttgggtcgctcttgtctaatcattggcatttctgtcttgtgtcctcggagctatgagatcagagtatgtgggcgaagctcggaaatatggaagagatggctgtcttacagaccttggtgcatgcagttatcatttggatatgttctgttgcttgtaagacaactggccagctggcatttcattacctgtatacattctttcctatggatttgcaagatatac</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0640800, RefSeq:Os12g0640800