Os12g0640900

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Revision as of 10:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0640900| Description = Myosin II heavy chain-like family protein| Version = NM_001073930.1 GI:115489821 GeneID:4352926| Length = 4433 bp| ...")
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Gene Name

Os12g0640900

Description

Myosin II heavy chain-like family protein

Version

NM_001073930.1 GI:115489821 GeneID:4352926

Length

4433 bp

Definition

Oryza sativa Japonica Group Os12g0640900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27713583..27718015

Sequence Coding Region

27713739..27713889,27714053..27714138,27714981..27715046,27715129..27715299,27715693..27715863
,27715948..27716103,27716196..27716342,27716521..27716592,27716687..27717160
,27717242..27717414,27717522..27717558

Expression

GEO Profiles:Os12g0640900

Genome Context

<gbrowseImage1> name=NC_008405:27713583..27718015 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27713583..27718015 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgacccatacggcgacggcaagggcctcaagcagcagcagcgccagaagctcaagcccgcgctcgaggtggaggacttcatcaacctcctccacggctccgatcccgtccgagtcgagctcacccgcctcgagaacgagctccagtataaggagaaggagcttggggaggcgcaggctgagatcaaggctctgcggctgtccgagcgagcgcgcgagaaggccgtcgaggatcttacggaagaattgacaaaggtggatgggaagctgaagcttacagagtctctcctcgaaagcaagaaccttgaggcaaagaagataaacgatgaaaagaaagcagcacttgcagcccaatttgcagcagaggctacacttcgaagggttcatgcagcacagaaggatgatgacatgccccctattgaggccattcttgcgccattggaagctgaactgaaactagctcgtcatgagatcgcaaaactacaagatgacaacagggcattggaccgccttactaagtccaaggaagcagctctgctggaagcagaaaggacggttcagatagcattagcaaaagcttctttggttgatgatttgcaaaacaaaaaccaagaattgatgaaacagatcgagatctgtcaggaagagaacaaaatcttggatagaatgcaccgccaaaaagtagctgaggttgagaagctcactcagactgtcagagagctcgaagaagctgttcttgctggaggtgcagctgcaaatgctgtgagagactatcagcgcaaagtccaggagatgaatgaagaaaggaaaactcttgatcgtgaactagctcgtgcgaaggtttcggcaaatagagttgcagtagtggtggcaaatgaatggaaagatggcaatgataaagtaatgcctgttaaacaatggttagaagaacggaggattttacaaggagaaatgcagcaactccgggataaactggctatagcagaaagggccgcacgatcagaagctcaattgaaagataagttccagctacggcttaaagtacttgaggaaggtttgagaatgtcaacgactcgaaccaatgttagtgcagcacgccgccagtctattggtggtgctgatagtttatccaagaccaatgggttcctatcaaaacggccatcattccagatgagatcgtcagtatctaccaccacaactactctggtcaaccatgcaaaaggggcatcaaagtcttttgacggaggctgtagatcacttgaccgttacaagggacatgtaaacgggtctggtatgaatgtatctacggactccagtgaagataaggaatcaaacaactcagatgagaaggctaacgaatttacatcagttgagacagaggatacggtatcaggtttgctgtatgatacgctgcaaaaggaggtaattgctctaaggaaggcttgccatgaaaaggaccaaagcctgaaagacaaggacgatgcagttgagatgctagcaaagaaagtagacacattgacaaaggcaatggaatcagagggtaaaaaaaggaggatggaggtagctgccatggaaaaggagatggcggctttgcggttggagaaagagcaggataacaaagcaaaaaggtttggtagttcaagttcgcagctgccacctggcaggacattgcctcggagtggttcagcacgcaatatgtga</cdnaseq>

Protein Sequence

<aaseq>MADPYGDGKGLKQQQRQKLKPALEVEDFINLLHGSDPVRVELTR LENELQYKEKELGEAQAEIKALRLSERAREKAVEDLTEELTKVDGKLKLTESLLESKN LEAKKINDEKKAALAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARHEIA KLQDDNRALDRLTKSKEAALLEAERTVQIALAKASLVDDLQNKNQELMKQIEICQEEN KILDRMHRQKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKTLDRE LARAKVSANRVAVVVANEWKDGNDKVMPVKQWLEERRILQGEMQQLRDKLAIAERAAR SEAQLKDKFQLRLKVLEEGLRMSTTRTNVSAARRQSIGGADSLSKTNGFLSKRPSFQM RSSVSTTTTTLVNHAKGASKSFDGGCRSLDRYKGHVNGSGMNVSTDSSEDKESNNSDE KANEFTSVETEDTVSGLLYDTLQKEVIALRKACHEKDQSLKDKDDAVEMLAKKVDTLT KAMESEGKKRRMEVAAMEKEMAALRLEKEQDNKAKRFGSSSSQLPPGRTLPRSGSARN M</aaseq>

Gene Sequence

<dnaseqindica>157..307#471..556#1399..1464#1547..1717#2111..2281#2366..2521#2614..2760#2939..3010#3105..3578#3660..3832#3940..3976#gactcgactcttctctcctcttctctctcccggtgtctctctgctctgatacagagagattatttgggtactgtgtgtgtgtgtgtcagagtgagagagagatagagagagagaggcagctgatcgccacagcgtgctcctcgccgcccgcctgccatggccgacccatacggcgacggcaagggcctcaagcagcagcagcgccagaagctcaagcccgcgctcgaggtggaggacttcatcaacctcctccacggctccgatcccgtccgagtcgagctcacccgcctcgagaacgagctccagtgtaacccccatcccatcccatcccatccttctcctcaaatgccgctcctccccgatctgatctaccccctagatcttcggatctcccctcccgctgtttcgatcggatctttcctcccacctaactgcatcttacaattcgcgacccctctgactgactgcagataaggagaaggagcttggggaggcgcaggctgagatcaaggctctgcggctgtccgagcgagcgcgcgagaaggccgtcgaggatgtcagtataaataaataaataaaatcctttccttttctttttctacatctctcctttataaatccgatgcatcttgtggaaactaccagatcccagcagctttcttcattttcattgtcgtgtactaatgcctagtgacctgctagatttaactagttggaaaatgacgggcctgttcactttgatgccaaaaaaaaccttaccaaattttggcattgccaaattttagcaaagttaccaaaattttggtaacttgccaaaattttggcaggatttcttatatagttaccaaaatttggtagcaaactaaatgtagtcacttttttggtaactttactaaaatttggtaaggttgaaaatggcatcaaagtgaacaggcctgacatcttctctttctgcggttcaaaatgaaaaacctttcaacataacaacaactcatgaaaactccatctatatactatgctctgtatctgctacttgctcactatggcctccatagagctcatagcccccaacgcttcaatgtctatgcgcatcaagctgctttctttgcgcttactgattgtaactgtccgattaatgacctccgagtcctgctattaacttgtttagcttgttattttgttgttgaacatggatccttacgctgcaacagctgtcaacttaacacagggcaacagccaacaggcaccctaagtaatttaggataattcaatgaccatgctgctgttatcatacttaactgcattgtcaaagcttttgacttatacttgtagtcaaactttaagattttttttttttgagggagactatcctgactttgccttctgcatcgatgtaagcttacggaagaattgacaaaggtggatgggaagctgaagcttacagagtctctcctcgaaagcaaggtaatggagcagccctattcttttcctctttcacagctcatattgtctcgagaacagttactgatagcacacgatgctgcagaaccttgaggcaaagaagataaacgatgaaaagaaagcagcacttgcagcccaatttgcagcagaggctacacttcgaagggttcatgcagcacagaaggatgatgacatgccccctattgaggccattcttgcgccattggaagctgaactgaaactagctcgtcatgaggtatttcatccaagtgtatacctggattctctttcttcttttctttccaatcagtaccaatgttcttcatgcatcggtctttgtgtcaagatgcttgctttacagatgaagaatgctgcaatccttctcaaagattattacctttaagtgatgtaacctacttattttacagctcttttcttgagagatatttacaatgtgacctgattcctaaatgtgttgcagatctcaattattctgaaacttgctaagagtagaggtctatatgctttatgctgtgctattgttgatttcagaatatcaccattaattgttccctgcttattccatatttgattgagtgtcagctgctactgaaacacttaggactaaggcattagttttcttgcatagatcgcaaaactacaagatgacaacagggcattggaccgccttactaagtccaaggaagcagctctgctggaagcagaaaggacggttcagatagcattagcaaaagcttctttggttgatgatttgcaaaacaaaaaccaagaattgatgaaacagatcgagatctgtcaggtataagacaacagaaatagcagtcatttgcaaagcatgtaccacatgtttagctacagtatataagtatttggcactctgcaggaagagaacaaaatcttggatagaatgcaccgccaaaaagtagctgaggttgagaagctcactcagactgtcagagagctcgaagaagctgttcttgctggaggtgcagctgcaaatgctgtgagagactatcagcgcaaagtccaggagatgaatgtaatgcatgatgccctgagcacacgttcctgatgtttattctacctaatagaatggtaattgatgccaatttacacttatgctgatgtcaggaagaaaggaaaactcttgatcgtgaactagctcgtgcgaaggtttcggcaaatagagttgcagtagtggtggcaaatgaatggaaagatggcaatgataaagtaatgcctgttaaacaatggttagaagaacggaggattttacaagtaagtaatgctatcatttaattatgtgctattgctgacttgttctggatggatacagtgaagccttttaatgcaacaattgttttcacttttccccactcctaaacggagtatactatggttcatctttttggggtctaatttgttgggaattttcttttctttctttcttttgcagggagaaatgcagcaactccgggataaactggctatagcagaaagggccgcacgatcagaagctcaattgaaagtatgttttgacatgtctcataaagttcttccatcttcctgttaattatgtatttctactatctcttcattgtgatctgcatcaaatttctcaggataagttccagctacggcttaaagtacttgaggaaggtttgagaatgtcaacgactcgaaccaatgttagtgcagcacgccgccagtctattggtggtgctgatagtttatccaagaccaatgggttcctatcaaaacggccatcattccagatgagatcgtcagtatctaccaccacaactactctggtcaaccatgcaaaaggggcatcaaagtcttttgacggaggctgtagatcacttgaccgttacaagggacatgtaaacgggtctggtatgaatgtatctacggactccagtgaagataaggaatcaaacaactcagatgagaaggctaacgaatttacatcagttgagacagaggatacggtatcaggtttgctgtatgatacgctgcaaaaggaggtaattgctctaaggaaggcttgccatgaaaaggaccaaagcctgaaagacaaggacgatgcagttgaggtaaatctagttggagagtgttgaattgtttttaacctttcattttgccttggtcctattaatgggtggtttgatgtatagatgctagcaaagaaagtagacacattgacaaaggcaatggaatcagagggtaaaaaaaggaggatggaggtagctgccatggaaaaggagatggcggctttgcggttggagaaagagcaggataacaaagcaaaaaggtttggtagttcaagttcgcagctgccacctggcaggtacttaatactgggaacaagatttacttttccttggttgagattactattaatttaattatgaaatgcagctaacgcacgtgagtatgtaatgtaatgtaactcaggacattgcctcggagtggttcagcacgcaatatgtgatgcaagcgaggaacacggcggcaaccagccaacccttacgaagcattcaaataagaggagagcttaattgggtgcttcgacatcatatccttgtctagttgttgaatgttggattagtagtgatgacgagctgctgattgatgtctggagaagatggatcgatcggttacatttttacacgtcgagccgagaagacggagcgattagcctatatctcgtgggaatcgcgacgactactctgtctaattaacctggcaaattaagctagtcttatttttaacctttggtttcttgatgagatttggtggtgtgtttttttttggcaatcatccatcatcgttgcctggtgctgtataggtttggtgagcccatgcatgcatatttttagtctcaaatttgtttgtaatcttaatactaaagaggatcggatgattatatatatatatatatgctggcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0640900, RefSeq:Os12g0640900