BGIOSGA015798

From RiceWiki
Revision as of 04:19, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015798| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015798, complete gene.| tag = OsI_146...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015798

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015798, complete gene.

LocusTag

OsI_14650

Ensembl Transcript ID

BGIOSGA015798-TA

Ensembl Protein ID

BGIOSGA015798-PA

Length

6116

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1304200..1310315

Sequence Coding Region

1304200..1304578,1308197..1308403,1308514..1309353,1309468..1310315

Genome Context

<gbrowseImage1> name=IndicaChromosome04:1304200..1310315 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:1304200..1310315 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACCGACGACGACGACCACGGACGCCTCTTCTGACCGCACTGTTGCTCGTCTCGCTGGCGGCGGCGGCGGCGGCGACGTTGAGCCAGGGCTGCGACGGCGGCGAGCGGCGCGCCCTGCTCCGGTCTATCAAGCCGCTCTTCGTCGGCGGCGAGTTCGGCTACGGCGATGCCTGGAACGAGAGCACCGACTGCTGCGGCTGGGAAGGCGTGGTCTGCGGCGGCGGCGGCGGCGGCCACCGCGTGGTGTCGCTGTCTCTGGTCCAGGCCGGCATCGCCGGCGCCGTCGACGGCGCGGCGTTCGCGGCGTTCACGGCGCTGCAGGAGCTGGACCTGTCGTGGAATCGAATCTCTGCCTTCTCTCTTCCATCTGCAGGAGGTGAGCGTGCATTTCAGAAGCTTAGCAAGCTCTCGCTTTCGCACAACAGTCTAACAGATGAAGGCGTTGCTGCTCTGGTTATCAACCTAACTACACTTTCAGAGCTGTACCTTGGCGGAAACCAGTTACTTACAACAAGTTGGATATCCAATTTGACGTCTCTTAGGATGGTTGATTTATCCCAGAACTTCTTACACGGATACAACGGTATATGTAACCTCCATCAACTAGAGTACCTACACCTTGGTGTCAACATGCTACATGGAACCATAAATTCATGCTTGGGAAAACTACAACAATTGAAGTACCTGAACATGGAAAGAAACTTTCTCATGGGGGAGATTGCACCGAACTTACTTATCAACTTGACCAAACTGGAGACTATACACCTGGGGGTGAACAATCTTATCGGCACATTCATGCTCTCCTGGCTTGCAAACAGCTCAAACCTCGTTGATGTTGTCCTCTCACACAACTACAATCTGAAAATCGAAACCGAGCTTGTGAGATGGACACCGTTGTTCCAGCTGGTATACTTGAATTTAAGCAACTGTGTTATCAATAGGCGAAGCAATGGAGTTGTGCCGACTTTTCTGTCAACCCAGCTTAGCCTATCCGGGATCGATGATCTCTCGCATTGTTCGCTCCAAGGCAGGATTCCACCCTGGCTGTTCTACAATCTATCTGATTTTGTCTTGCTCAATGGCAATAGAATGGACGTCATTGATATGGATGGGCTTGGTGGTAACATGACCTCACCGGTGCAGGTGCTTGATTTGTCAGAGAACAAAATATCGATGTCGATCCCGACCAACTTTGGAAGCATTTTTCAGTTTTTGGACTACTGTGACATGTCCTCCAACAGGTTGTACGGTGGGATTCCATCATTGGCAGAGGCAACATCATTGGAGGTGCTTGACTTGTCATCTAACAACCTCAATGAGGAAATATTTCCAACATTAATAGGGAATTTGTCAATTCTAACATCTCTTCTACTCTCCAATAATGACGTGACAGGGCCTATGCCACCTTTCCATTGGAATTTGGGAATCATCCCGGATGGCCTCCTGAGCTTCCAACAGCTTGGTGTGATCCTCCTTGGAGGGAATGACTTTCATGGTCCAATACCATTGGACCTTTGCTTCAACAACTATCTCCACTTTGTTGATCTCTCCAACAATCAATTCTCTGGGGAGATACCAAATTGCTTCTACAATGATTTCTGGACAGATTTGCCAATGTACTTCAACGATGACCCATTCTCAGGCAATATCACAGAGCGCATGTCTGTCGACTTCACGACGAAAGGTGAGAACCTTACCTACATGGGAGAGCCTCTAGTGCTCATGACAGGCATTGATCTGTCCATGAATCAATTGTCAGGCGCCATCCCTCCGCCATTAGGTTTCCTGAGGCAGCTCAAGTCTCTAAACTTATCACATAACCAACTTGTTGGCCCGATACCAGAGACATTCATGTATATGCAGGATATGGAGAGCCTTGACCTCTCATACAACCACCTCAATGGCAGCCTGCCTATGCAGCTGGCAAATCTCTCCTTCCTGTGCTCGTTCAATGTTGCCTACAACAACCTCTCTGGTGAGATACCCTTCCAACAACAGCTTGGGACATTCGATGAATCGGCATTCGAGGGGAATGACAATCTCTGTGGTGAAATCATCAACAAAAACTGCTCATCAGTGCTGCATCAGAATCAAGGAGTGTTCGACGCCATTGACACGTCACTTGTTTTCTGGTCCTACGTTTTTGGGTGTTTTGCACTTGGATTTTGGGGCACCGTGGCATTGCTGATATGGGATGAAGTGTGCAGGAGGAGACTGTGTGACTTGATGGATGCTCTAATGTTTAAGCTGGGTTGGGAATTTGTGCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MDRRRRPRTPLLTALLLVSLAAAAAATLSQGCDGGERRALLRSIKPLFVGGEFGYGDAWNESTDCCGWEGVVCGGGGGGHRVVSLSLVQAGIAGAVDGAAFAAFTALQELDLSWNRISAFSLPSAGGERAFQKLSKLSLSHNSLTDEGVAALVINLTTLSELYLGGNQLLTTSWISNLTSLRMVDLSQNFLHGYNGICNLHQLEYLHLGVNMLHGTINSCLGKLQQLKYLNMERNFLMGEIAPNLLINLTKLETIHLGVNNLIGTFMLSWLANSSNLVDVVLSHNYNLKIETELVRWTPLFQLVYLNLSNCVINRRSNGVVPTFLSTQLSLSGIDDLSHCSLQGRIPPWLFYNLSDFVLLNGNRMDVIDMDGLGGNMTSPVQVLDLSENKISMSIPTNFGSIFQFLDYCDMSSNRLYGGIPSLAEATSLEVLDLSSNNLNEEIFPTLIGNLSILTSLLLSNNDVTGPMPPFHWNLGIIPDGLLSFQQLGVILLGGNDFHGPIPLDLCFNNYLHFVDLSNNQFSGEIPNCFYNDFWTDLPMYFNDDPFSGNITERMSVDFTTKGENLTYMGEPLVLMTGIDLSMNQLSGAIPPPLGFLRQLKSLNLSHNQLVGPIPETFMYMQDMESLDLSYNHLNGSLPMQLANLSFLCSFNVAYNNLSGEIPFQQQLGTFDESAFEGNDNLCGEIINKNCSSVLHQNQGVFDAIDTSLVFWSYVFGCFALGFWGTVALLIWDEVCRRRLCDLMDALMFKLGWEFVP</aaseq>

Gene Sequence

<dnaseqindica>1..379#3998..4204#4315..5154#5269..6116#ATGGACCGACGACGACGACCACGGACGCCTCTTCTGACCGCACTGTTGCTCGTCTCGCTGGCGGCGGCGGCGGCGGCGACGTTGAGCCAGGGCTGCGACGGCGGCGAGCGGCGCGCCCTGCTCCGGTCTATCAAGCCGCTCTTCGTCGGCGGCGAGTTCGGCTACGGCGATGCCTGGAACGAGAGCACCGACTGCTGCGGCTGGGAAGGCGTGGTCTGCGGCGGCGGCGGCGGCGGCCACCGCGTGGTGTCGCTGTCTCTGGTCCAGGCCGGCATCGCCGGCGCCGTCGACGGCGCGGCGTTCGCGGCGTTCACGGCGCTGCAGGAGCTGGACCTGTCGTGGAATCGAATCTCTGCCTTCTCTCTTCCATCTGCAGGAGGTATGTACGCATGCATCCATCTTCGTCAGAATCGAACCAAGCATAACTTAATTTGAAGTTCCAAAATGGACAATTTGATTTAGAATTGCAAAGTTTTTCAGATTTGATTTTATCTTCTGCGAGGATGATGATGGAATTGATTTTATTTTAATCTCAATCAGCATGATTGTGTGCATGCCTATATGGATTCTGCGGGCTTAATCTTATTTTAATCATATTAATTACAGTTTTTTTATCAGCGAAACACTAAACTGTACATTATGAAAATAATAGTTACTATTAAAATATTTAAAAGATATATAGGACAGTATGTTGAATATTTTGTCTCGTGCATATATAAAACAACGAATCTAATTTTAATGGTTAAAATATAATTATTATTATCGTCAAACTTCATGTGAGATTTTATGGATACGAATACAATGATATAATTGGATTATTAAATAAGTGATTGTGATGATCATTAGAGGCCGAGAGAAAGAAAAAGGAGAGAAGAGCTGTTGAGCTAGTGGGCTTGGGCTGCTTTGGTTCGCCGAGCTTTGCTAGCGTTAAGTGCTTGCTGGCAGCAAGCAGCAGGCCTTTGGACATTGTGCCCACGTTAGGGTTGTATGATACCATTCTTTAACTAAAACTTGCCATGTTGTAGGTAGCAAAAAAATTATGAAATTTGATCAAAATTTAGTTAAATTAGTTCATGAAAAGTTGGTAAAACGTAGAAATTTTTTGAAAGAACCCATTTCACCCTGGTTGGTCCGTTGTCACAACCCATGGGGAATGCCCTTCGAATTGAAAGAACACACATGTTGCTCTTCATATTTAATTGATTCAATTCGATCTAATCATACAAATTACAGAAACACTGGAAAGCCTTTCACCAAGAGAGCAGCTAAGCATGTATATCCGTATCTATTGTCACTCAAACAGTTCAAGGTTATTTTAGTGTGTACGGCTAGGACTTATCTTAAAAGTAGTAGAATTTAATTTGTAGCTCAATGATTTTGCATTTTAGTTTGGATAAATTTGAACCAAGTAACACTGGTCGAAGGATCAGATATTCAAAGGAAATAAGTTATAGAAGGGTAAAAGACTACTAGTTCGGTGATGGCTTTAGGGCCTCAAGGCTCCAGGCCATTGGTGCCGGCGTAACATGGTCTGTGTTGGTCTCAGCCTCGCCGTGGTCGGCCGCCACAATACACTGTATGGCCATTGTTTCCGCTACTTTGTTTGCACCACCAACTGACCAACATAAATGCCCAAGACAACTAGACAGCGAGAGCTGCCAGACCAAGTAGGTCATTTGGTCTTCCGTTTGCCTAGGAACAAGGGCATCTATTTAAGCCACAAATGAATAATACATCCTATATTTTCTCTGAAATATTTGGGTATGCCGGTGCATACTCGGCACCACCCCTAGGTCCGCCCCTGATGGTCCCATCTCGCGAGCAGCATTAGCAGTAGCGTGGCCGAATTTAAAATTTTCTATGTAAAGTGAGGACATAAACGTAAACGGTTATATCAGAGGTGTGGTTCAACCAATTGGTTTGGATATATAATTATTTTTGGTGGATGCACTAAATTACAAGAAAAAAAATTGATACCCACATGTTATTAATCTTTTACTTATCGTTGTATGTCTACGTGCTCCCACATAGTATTGGACCAATGTCTGTTTTTTTTCTCGAGTTGGGTACACAAGGAAAAGCATTTTCCTTGTTAAAAAAGAGCTAATTGCAGGTTGGGCAATGTATTTTTCTAGCAAAGATTCAATTTGATCATCTTTTGTCCAATATTTTTGCTTAAAACCATATATATCTTTGGATAGGGGTGGGCATTTAGTCAGACCGAACAATTTGGTCTCGGCCTTCAGTCTTTAGTGAAATTTCGGTCATCAGATTCTTGAGACAGATTAATCCTGAACAAAATCGAAGATCGAGTACTTTGGTCAGTCTGGTTCAGCCTTGGTCACAACTGAACTAAACGCTTTGTGTTCACAGCCAAAATAAAAATCACTGGTGAAGAAACAATTACACCATCGAACTGACTGCAAAATATGTAATTACAGACAAAAAGATCACAGAAAACAATTACACATATACATGCTGTATTGCTGTATAGGGCTATTGGGCTGCACAGTGAAATTCGGCCATTTTCAGTTAACCGAGCCATATAACCAGACTAAATTTGGTTAGTACACTTTAATGACTGAATTTCTTAGTCTCGTTTTTTTTCCCTCAATCTGTTCGGCTCGGTCTATTTTGTCTACCTCTATATCTTTGGCTTGGAGGAAACTATCGGGGTCTAGTGGCTAGCAGCATGGTTGGTGAGTTAGTCATCCCAGGTTCGGTTCCTCCCTTCTACAAAATATTTGGGGGATGTCTCTCCCTCCAAATATTGTTTTTTTATATCTTTGGCTAGGCTATCTCGCACTTTTTGCTACTGTCTCTCCAATCTCTTCTCCACCTCCAATTCCTGACCTCCACCATTGCCATCGTCAGCTCAACCCTTGAGCTCAAGCTCATGATCTAGCTCTGTCCACCTAGAGCTCCAACGATTACTTTCTCTAGATGACAATAGAGAGCTGAAGCTCGGTAGCAGGCCTCTCTAATGCACTCAGATCCTAGCAACTGGCAGGGTTGGCAACGGGGTGGATCAGGGCTGGGTTGGACAAGATTAGCCTTAGCCTTGACTTTCTCCCCCAACCTCTGGCCTAAAGGAGAAAACAGTGCCAAATAAAGCCCCGCCCCTGGTCTTGCTAGGGACCTAACCTCCCATCAAGGCCTCATTAGTTGCTGGCAGGCAACAAAGACACATAAAGGTGGTGTGGAGGTGAGGTTGGTGGGCATGTGGTGGCTGGTGGTGGGAGGCATGTAGTCAAGGGAGCCGAGGGAGGCGGCGGAGCAGCAGCTGCACGTTTCGTGCGATGAAAATGAGGGTGGCGTCACTCGGGACTGGGAGAGGGAGTCGTTGTGCATTGACATACACATTGATCCTTGAGCTAGTAAGGTATGTGGGGATTAGTTTAGATCCATTTTATACTCCAAGTATTTGGGCCAGCCTGATATTGTGGGTTTTTCTCTTGTAACTTGAGGAGATATCCTCCTCCATTGAGATTAGTTTCTTGGCCCTAGGCCCTCATGATGTTGGGGTGCCATGCTGATGGATTCGCAGGTGCAGATTTTGCTCTCGTCCCTTAGATGCGGGTCTCTACACCCATTAGGGAAACTGTCACCCATAGCAGCCAGATTTGAGAAAGACCAACTCAGCCCTTGGTTGTGCTTATCTAGGAGTCCACCCTCTGCTAAGCTTGATCTATGCTTGCATCACCCAAAACTAGAAGATTGAACTTGTGCACCCTACCCCAATGATAGAGCTCCATTTCCTACAACCGTGCCATGCTGCCCAAGCTCGAGGTCCATCTTGGCCTATGTCCTCATGGCCCGTGGATTTTACCTCTACATCTGAGTGCCGATTTGACTAGTGGGAACTTAAGGATATAGTATATCGATTCATGTCTAACTCTACATTTTTTTTTAAAAAAGAAAGAGTTTTGCTTGCCAGTATGTTTTAACAATATGCACAATAAAATAGAATAACTCAGATTGTTATGTACCAATTTAGGTGAGCGTGCATTTCAGAAGCTTAGCAAGCTCTCGCTTTCGCACAACAGTCTAACAGATGAAGGCGTTGCTGCTCTGGTTATCAACCTAACTACACTTTCAGAGCTGTACCTTGGCGGAAACCAGTTACTTACAACAAGTTGGATATCCAATTTGACGTCTCTTAGGATGGTTGATTTATCCCAGAACTTCTTACACGGATACAACGGTATATCTCCGCTCTTTTTTTTAGTATCCAGGGCAATTTATCCAATATTTGTGTTTTAGTTTTGCCGAACGATGACATCGACCTATATCTTTTCACAATGATTTACGCAGGTATATGTAACCTCCATCAACTAGAGTACCTACACCTTGGTGTCAACATGCTACATGGAACCATAAATTCATGCTTGGGAAAACTACAACAATTGAAGTACCTGAACATGGAAAGAAACTTTCTCATGGGGGAGATTGCACCGAACTTACTTATCAACTTGACCAAACTGGAGACTATACACCTGGGGGTGAACAATCTTATCGGCACATTCATGCTCTCCTGGCTTGCAAACAGCTCAAACCTCGTTGATGTTGTCCTCTCACACAACTACAATCTGAAAATCGAAACCGAGCTTGTGAGATGGACACCGTTGTTCCAGCTGGTATACTTGAATTTAAGCAACTGTGTTATCAATAGGCGAAGCAATGGAGTTGTGCCGACTTTTCTGTCAACCCAGCTTAGCCTATCCGGGATCGATGATCTCTCGCATTGTTCGCTCCAAGGCAGGATTCCACCCTGGCTGTTCTACAATCTATCTGATTTTGTCTTGCTCAATGGCAATAGAATGGACGTCATTGATATGGATGGGCTTGGTGGTAACATGACCTCACCGGTGCAGGTGCTTGATTTGTCAGAGAACAAAATATCGATGTCGATCCCGACCAACTTTGGAAGCATTTTTCAGTTTTTGGACTACTGTGACATGTCCTCCAACAGGTTGTACGGTGGGATTCCATCATTGGCAGAGGCAACATCATTGGAGGTGCTTGACTTGTCATCTAACAACCTCAATGAGGAAATATTTCCAACATTAATAGGGAATTTGTCAATTCTAACATCTCTTCTACTCTCCAATAATGACGTGACAGGGCCTATGCCACCTTTCCATTGGAATTTGGGTAGTTTGAAGCACCTCAGCCTTGAGAACAACTGATTCTCGGGACGGCTATCTCCATTGCTGTCGAACAGCAGTAATCTCAAGACACTCAATGTGAGAAACAACCATCTATCAGGAATCATCCCGGATGGCCTCCTGAGCTTCCAACAGCTTGGTGTGATCCTCCTTGGAGGGAATGACTTTCATGGTCCAATACCATTGGACCTTTGCTTCAACAACTATCTCCACTTTGTTGATCTCTCCAACAATCAATTCTCTGGGGAGATACCAAATTGCTTCTACAATGATTTCTGGACAGATTTGCCAATGTACTTCAACGATGACCCATTCTCAGGCAATATCACAGAGCGCATGTCTGTCGACTTCACGACGAAAGGTGAGAACCTTACCTACATGGGAGAGCCTCTAGTGCTCATGACAGGCATTGATCTGTCCATGAATCAATTGTCAGGCGCCATCCCTCCGCCATTAGGTTTCCTGAGGCAGCTCAAGTCTCTAAACTTATCACATAACCAACTTGTTGGCCCGATACCAGAGACATTCATGTATATGCAGGATATGGAGAGCCTTGACCTCTCATACAACCACCTCAATGGCAGCCTGCCTATGCAGCTGGCAAATCTCTCCTTCCTGTGCTCGTTCAATGTTGCCTACAACAACCTCTCTGGTGAGATACCCTTCCAACAACAGCTTGGGACATTCGATGAATCGGCATTCGAGGGGAATGACAATCTCTGTGGTGAAATCATCAACAAAAACTGCTCATCAGTGCTGCATCAGAATCAAGGAGTGTTCGACGCCATTGACACGTCACTTGTTTTCTGGTCCTACGTTTTTGGGTGTTTTGCACTTGGATTTTGGGGCACCGTGGCATTGCTGATATGGGATGAAGTGTGCAGGAGGAGACTGTGTGACTTGATGGATGCTCTAATGTTTAAGCTGGGTTGGGAATTTGTGCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015798