BGIOSGA015818

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Revision as of 04:20, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015818| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015818, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA015818

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015818, complete gene.

LocusTag

OSJNBA0027H09.3

Ensembl Transcript ID

BGIOSGA015818-TA

Ensembl Protein ID

BGIOSGA015818-PA

Length

5021

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1734443..1739463

Sequence Coding Region

1734443..1734546,1735236..1735347,1735660..1736398,1736528..1736580,1736718..1736795
,1736911..1737209,1737462..1738278,1738378..1738644,1738789..1738983
,1739089..1739174,1739271..1739463

Genome Context

<gbrowseImage1> name=IndicaChromosome04:1734443..1739463 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:1734443..1739463 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCGCGCCACCGCTGCACACCCCGCCTCCTCCTCCGTCTCCGCCGCCCACTGGATGGCGACGGAGGATCTCGGCCTCCGCCGCAACATCGTCAACAACATGGTGAAGAAATTTATGACCATTACCAATTCTCAGCAAGATCATCATTACCGGGAGATCCAAAATTATGCTATCAGATGTGAACAGGACGCGCTTAACAAGACCACCAATAAGGAAGATTATTTGAGATGCATAGCTCAAAGAATCATGAATATGGAGATGAAAGTAAGACGATCACAATCACTGCAGGCAGGGACGACGCCTAGCGCACAGAGGCCATCTTCCCAGCAACAAAATGTATGTACCACACCACAAAATCCAGGCCAAGTGCCAGACCAGCACAGGGCTTCTGCACCAAATTCACAGATCGAAGCTAGCCAAGAACAGACTGTGATGGTGGCAGCTCCGGATTGTTACCTCAACTTCAATACCACAGCAATTAGTCCAGTGGCAATGTGTGTCCATCCTAGCCAGCAACCTCAGAGTCAACAACACCAACAACAGGCCAAGCAACTACATCCCACAAACGTTGTCGGATACAACCCAACTAGCTTGAATCAGATTCAAGGACAATCAGTTAGTGGACAAAATTTTCAGCAGAATCATGTACTAGGGCAGAATGCCAGTGGCAGTGGTACACAACAGAGGCAACTAGTTGAGACACCGGAGCAGCACCAGCTGTTGAGGATGAAGCAGCAACATATGAGGGGAAACCAGCAGCAGAATTTCACCCAGAGAAACCAAATTCTTCCAGCACAGCAGGCCCATCTTGGCAAGATGCAGATTGGTCATCCTGCAGTAAAGAACAATCAGCAGAATGTTGGAATGTCATGTCAGCCTATGACTCCACCTCAATGTCAAGTTGCCACAGCTCAACAAAGCAGTCTTGGTTGTGATAGCCCTCAAACTTTAGAACCGATCGTAATTGCCGGAGAAGTGGATTGGAGGGAAGAAATATTTCAGAAGATCAAGTCATTCAAGGATGCATACCTTTCCGAAGTTTTGGAATATGATCAAATCGTTCATGTTCCGAAGTTAACAGAGGAGCAACTCCGTTCATTACCTGTTGAGAATGCTGAGAAATTGAGGCGTATAAGACATGTCAAGAAAATTATCGCAATAATGCTAGACTTGTTGAATACCCAGAAAAGCAACGTGCACAAGGGTATGCAGAATATATTCCCCATATTCCAGCAGTACCTGGGGCAATTGCGACTTTCCATATCAAAAAGTAAAGCTCGGAAGACAGTGGCAAAAATAGGGTGTCAGTCGCAGAATTGCAGTGAGAATTCTCATATCGTCAATCTTGGTAGCAATACAGCCCCATTCACTTGTGATGCAAGTAGACAGCAAAAACAGCAAGAGCAAGTTATCAGTGCTAAAACTTCCAGGATGGAGCAAGCAATCATGACCCGAACTCCCACACCTCAACAAGAAAGTCATGGCTGCCACCTACTAGGAGTACCAAGCTCTTGTTTCTCACCAAAAGCACTGCAACCTTCCTCAACCAATACTATTGAGGAGTGCTTCACCCCATCCCCGGTAACCCAGACAGTTCAACCAATTCAAGTAGCTTCACCCCATGTTACTTCACCCGGTGCTTATGGAAAATCATCTGTTCCAAAGCCTAGTGTTGCACGAGTTGTTTCACACTCTGCTTCGATAAAGTCAAGATTGGCATCATCCCCTAGCAGGCCAGAAGGTGCGCATGCTGCCTCGCCCAATATTACTTCAGTTGAATCCACATTGCCAACTCCTATTGCCAAGCCAGGGACTGTACGAGCTGCCTCACCTTGCACTCCAGTCAAATCCACATCGCAATCGCAGCTTAGCAAGCCAGCAGTTACAGAAGTTGATTCATGCCGTGCTTGTGTGACATCTAAACTGAAATCTCCTGTTGGCAAGCCAGAGACTGCAGGAGCTGCTTCACCATGTGCTTCTGTGAAGTCCACAGTGTCACTGGACGTTGACAGTGTTACTGAATTCTTGCAGCACCGTGTTGTAGCACCTACAGTAGCAAATGGTGGTTCTTCTAACCAGGCAATTCATACTCTGGTATCAGCAGTGCCACCTAAAGCTGCTCATCAAGCAGATGATCAGGTGCAAAACGGAGCTGAAGAAATGGAAGCCAAAAAGCCCTTCAGCCGCCTAATTGAAACACTCCTGTCTTCATCACCGGAAGCACTCCGCCACTCATCTAATTCCATGAGATTGGCTATCTGGGAGGCTGACCGAATACCAGCACCATCACCACTACCATACCGACCAAGGAACGGTAAAATGAAGCGTGACTTTGATCATGTGACATCACGTCCTATCTCATCACCATTGAGAAGCATGGATGAGAGTTGCATGACTTATGAGTGTGTTGCGTTCGAGGATGAATCGAGTGGGGAATATAATGCGAAGAGGCAGAAAACACAAGTGAATGCCAACGATGCTCTGGTGGACGAGATAAAAACTATCAACAACAAACTAGTTGATACTGTGATGAACATTGCTGATGAAAATGGGACAGATGAAATCATTTATCAGAACGGTGGCGGGATGTTGATCAAACTCTCTTACAATTCCATGTCGCTTTCGCCAAGCCTGAAATCTCTTTTCGCAGCATCTGAAATGACCATTGTCATGCCCGTGAAGCTGTTGGTCCCCGCGGATTATCCGAAAAGCTCTCCGATCCTTGTCGACAATGACGATGAACAGAGGAGGTTGAGTGACATCTCGTACGCGGTCGCCGTGGCATTCGGGCGCGCCGTCGACGAGTTGCTGGAGCCGCGGTCGATCGAGGCGATGGCCATGGCGTGGGATGGCTGCGTGCGGCGGGCCGTCACCGAGGTGGCGCATCGGCACGGCGGAGGAACGTTCAGCTCGAGGCACAACCAGTGGAGGGCCGGGTAG</cdnaseq>

Protein Sequence

<aaseq>MERATAAHPASSSVSAAHWMATEDLGLRRNIVNNMVKKFMTITNSQQDHHYREIQNYAIRCEQDALNKTTNKEDYLRCIAQRIMNMEMKVRRSQSLQAGTTPSAQRPSSQQQNVCTTPQNPGQVPDQHRASAPNSQIEASQEQTVMVAAPDCYLNFNTTAISPVAMCVHPSQQPQSQQHQQQAKQLHPTNVVGYNPTSLNQIQGQSVSGQNFQQNHVLGQNASGSGTQQRQLVETPEQHQLLRMKQQHMRGNQQQNFTQRNQILPAQQAHLGKMQIGHPAVKNNQQNVGMSCQPMTPPQCQVATAQQSSLGCDSPQTLEPIVIAGEVDWREEIFQKIKSFKDAYLSEVLEYDQIVHVPKLTEEQLRSLPVENAEKLRRIRHVKKIIAIMLDLLNTQKSNVHKGMQNIFPIFQQYLGQLRLSISKSKARKTVAKIGCQSQNCSENSHIVNLGSNTAPFTCDASRQQKQQEQVISAKTSRMEQAIMTRTPTPQQESHGCHLLGVPSSCFSPKALQPSSTNTIEECFTPSPVTQTVQPIQVASPHVTSPGAYGKSSVPKPSVARVVSHSASIKSRLASSPSRPEGAHAASPNITSVESTLPTPIAKPGTVRAASPCTPVKSTSQSQLSKPAVTEVDSCRACVTSKLKSPVGKPETAGAASPCASVKSTVSLDVDSVTEFLQHRVVAPTVANGGSSNQAIHTLVSAVPPKAAHQADDQVQNGAEEMEAKKPFSRLIETLLSSSPEALRHSSNSMRLAIWEADRIPAPSPLPYRPRNGKMKRDFDHVTSRPISSPLRSMDESCMTYECVAFEDESSGEYNAKRQKTQVNANDALVDEIKTINNKLVDTVMNIADENGTDEIIYQNGGGMLIKLSYNSMSLSPSLKSLFAASEMTIVMPVKLLVPADYPKSSPILVDNDDEQRRLSDISYAVAVAFGRAVDELLEPRSIEAMAMAWDGCVRRAVTEVAHRHGGGTFSSRHNQWRAG</aaseq>

Gene Sequence

<dnaseqindica>1..104#794..905#1218..1956#2086..2138#2276..2353#2469..2767#3020..3836#3936..4202#4347..4541#4647..4732#4829..5021#ATGGAGCGCGCCACCGCTGCACACCCCGCCTCCTCCTCCGTCTCCGCCGCCCACTGGATGGCGACGGAGGATCTCGGCCTCCGCCGCAACATCGTCAACAACATGTGCGTCACCACCCGCTCCCCCCCTTCTCCTCTTAAATCCTCTCAACACGATCGATTTTTATTTTCTTTATTTGATTTCCTCATGGGGATTAACCGGAGTTCTGTGAGGGAGGAGCTAGCTTGGATTGCGGAGTCTCCGGCGGCCGGGGGTTTTGGTTGGCTTGTTTGGTCGCCGCCGTCGTTGCTCTAGCTGCTGTGGTTATGGGGGTTCTTGATCCGGGTCGGCGGCGGCGGCGGCGAGGTGTAATGCTGGTTTTGCGGAGGGTTTTGCTCCATGACACCGACATGGTCGATTGATGCTCGATGCGTGCCGTACTGAATTCAGGGTTGGAGATTCACGGATTTGATTAGCCGCCGTCGCTCTATTATGATCCCGACGATCCATTAATTAGCTCTAATATTGCTTTGTTTGTGTATATGTGCATGCTATTGCAATCTATCCCAAATTACTTTGCTCTGTTTGGCGCTGCTTTCAAAGCTGGAAATCTGCCATATTCCTTTTTGGTTGCTAATTAAGTGAGATGGTGTATATAGATTTATTAATATACTGATGCATTGCTTGATTGTATGGGCCTGATTCTTGGTTGCAAAGATGTGATCAACTGATGTCAACATGTTGTTATGAGGTGTGATTCAAAGATTTTGAATTGATAAAATCTGACCGGGTTACAATATCGACTGCTTTTCAGGGTGAAGAAATTTATGACCATTACCAATTCTCAGCAAGATCATCATTACCGGGAGATCCAAAATTATGCTATCAGATGTGAACAGGACGCGCTTAACAAGACCACCAATAAGGTATATACATATATCTGTGCAGCTAATCTGTTCCTGGCTTCCTGCTCTATCGATCGATAGATAATTTGTTCCCTGTACCAATAAATATTCATATCATCGTTCGCGTGCAAGTGCAATATTGCGGTGTGTCCAATTTGTTTTCGGTGCAACAATTCATTTATATGTTCCTTCTACTTAAGCAAATGCTATATGATTGCAAATCAATCTTCAATTAGTTTGCTTCCTTTGTTATGTAATTATGTTTGCTGTACAAATAATTCTATGTTAGTTTGTTGTGGTTATAATTAATTGATAAATTGTGGGGTTCTCCAGGAAGATTATTTGAGATGCATAGCTCAAAGAATCATGAATATGGAGATGAAAGTAAGACGATCACAATCACTGCAGGCAGGGACGACGCCTAGCGCACAGAGGCCATCTTCCCAGCAACAAAATGTATGTACCACACCACAAAATCCAGGCCAAGTGCCAGACCAGCACAGGGCTTCTGCACCAAATTCACAGATCGAAGCTAGCCAAGAACAGACTGTGATGGTGGCAGCTCCGGATTGTTACCTCAACTTCAATACCACAGCAATTAGTCCAGTGGCAATGTGTGTCCATCCTAGCCAGCAACCTCAGAGTCAACAACACCAACAACAGGCCAAGCAACTACATCCCACAAACGTTGTCGGATACAACCCAACTAGCTTGAATCAGATTCAAGGACAATCAGTTAGTGGACAAAATTTTCAGCAGAATCATGTACTAGGGCAGAATGCCAGTGGCAGTGGTACACAACAGAGGCAACTAGTTGAGACACCGGAGCAGCACCAGCTGTTGAGGATGAAGCAGCAACATATGAGGGGAAACCAGCAGCAGAATTTCACCCAGAGAAACCAAATTCTTCCAGCACAGCAGGCCCATCTTGGCAAGATGCAGATTGGTCATCCTGCAGTAAAGAACAATCAGCAGAATGTTGGAATGTCATGTCAGCCTATGACTCCACCTCAATGTCAAGTTGCCACAGCTCAACAAAGCAGTCTTGGTTGTGATAGCCCTCAAACTTTAGGTACTTAACTTTCTGAGAACATTTTAATGAACAATGGACTGTGAACACCATAAGTCCATAACACTTGGCTCAAAGCTATATTTTTATTTGTTTTTCACCGGATTTTCATATTCTGTTTGTCACTCTCAGAACCGATCGTAATTGCCGGAGAAGTGGATTGGAGGGAAGAAATATTTCAGAAGGTGAGGAACTGAGGATCCTCTATTTACATATTTGGGTCATCCACTGTACAAGTATCACTAGCTATTCCATGATCGACCCGTTAGGTTTAATCCCATATAGTCATGATTTTGAAAATATTTGTTTTCTTCATCTACAGATCAAGTCATTCAAGGATGCATACCTTTCCGAAGTTTTGGAATATGATCAAATCGTTCATGTTCCGAAGTTAACAGAGGTCTTCTGCCCTTCTCATTTTCAATTCTGCTCCTGCAAACAATTCTTCTTCAATTCAATCCCTTGTTATTTCTCGTGCATAGATCTCTTATATCGTCCGTTTCATTGTCATGTAGGAGCAACTCCGTTCATTACCTGTTGAGAATGCTGAGAAATTGAGGCGTATAAGACATGTCAAGAAAATTATCGCAATAATGCTAGACTTGTTGAATACCCAGAAAAGCAACGTGCACAAGGGTATGCAGAATATATTCCCCATATTCCAGCAGTACCTGGGGCAATTGCGACTTTCCATATCAAAAAGTAAAGCTCGGAAGACAGTGGCAAAAATAGGGTGTCAGTCGCAGAATTGCAGTGAGAATTCTCATATCGTCAATCTTGGTAGCAATACAGCCCCATTCACTTGTGATGCAAGGTTAGTAGAAGCTAATTGTTCAAAGTTTCAATTTGACACATTCCTGAAAGTGTACTTCACATTTATTTCAGAACATGTTGATGCAAAACATAGTGAAAAATAAGTTAGAATTAAATGACAACTGAAAGTGTAACTTCACATTGTGTTTGATAGTATAAATCCCAAAAAGTTGTTAATGATTATATATCCACTCATTCTTTTTATAGGAGATAAATATGTGTAATACATTTATTATATCTTTTTTTTTTGCAGTAGACAGCAAAAACAGCAAGAGCAAGTTATCAGTGCTAAAACTTCCAGGATGGAGCAAGCAATCATGACCCGAACTCCCACACCTCAACAAGAAAGTCATGGCTGCCACCTACTAGGAGTACCAAGCTCTTGTTTCTCACCAAAAGCACTGCAACCTTCCTCAACCAATACTATTGAGGAGTGCTTCACCCCATCCCCGGTAACCCAGACAGTTCAACCAATTCAAGTAGCTTCACCCCATGTTACTTCACCCGGTGCTTATGGAAAATCATCTGTTCCAAAGCCTAGTGTTGCACGAGTTGTTTCACACTCTGCTTCGATAAAGTCAAGATTGGCATCATCCCCTAGCAGGCCAGAAGGTGCGCATGCTGCCTCGCCCAATATTACTTCAGTTGAATCCACATTGCCAACTCCTATTGCCAAGCCAGGGACTGTACGAGCTGCCTCACCTTGCACTCCAGTCAAATCCACATCGCAATCGCAGCTTAGCAAGCCAGCAGTTACAGAAGTTGATTCATGCCGTGCTTGTGTGACATCTAAACTGAAATCTCCTGTTGGCAAGCCAGAGACTGCAGGAGCTGCTTCACCATGTGCTTCTGTGAAGTCCACAGTGTCACTGGACGTTGACAGTGTTACTGAATTCTTGCAGCACCGTGTTGTAGCACCTACAGTAGCAAATGGTGGTTCTTCTAACCAGGCAATTCATACTCTGGTATCAGCAGTGCCACCTAAAGCTGCTCATCAAGCAGATGATCAGGTGCAAAACGGAGCTGAAGAAATGGAAGCCAAAAAGCCCTTCAGCCGCCTAATTGAAACAGTAAGTCTACCAGATTGCTCATCTCAACCAGAATTGATGCTTATGTTGTGAAATCTCCTACTAGCAGTGTTGTGCTTTGTCCCTCTATCTGTCTTTCAGCTCCTGTCTTCATCACCGGAAGCACTCCGCCACTCATCTAATTCCATGAGATTGGCTATCTGGGAGGCTGACCGAATACCAGCACCATCACCACTACCATACCGACCAAGGAACGGTAAAATGAAGCGTGACTTTGATCATGTGACATCACGTCCTATCTCATCACCATTGAGAAGCATGGATGAGAGTTGCATGACTTATGAGTGTGTTGCGTTCGAGGATGAATCGAGTGGGGAATATAATGCGAAGAGGCAGAAAACACAAGTGGTATGATATGGCTGGCCATTACTATTTTGTCTGAAATGGCAAATCCATTGTTATATGTTACCTTGTCTATCTGTTGGAACATAATTTTCTTCTAGTTAAAACCACATTGAAATCTAATAATGCACTCTAAACCTTGACTTGCAGAATGCCAACGATGCTCTGGTGGACGAGATAAAAACTATCAACAACAAACTAGTTGATACTGTGATGAACATTGCTGATGAAAATGGGACAGATGAAATCATTTATCAGAACGGTGGCGGGATGTTGATCAAACTCTCTTACAATTCCATGTCGCTTTCGCCAAGCCTGAAATCTCTTTTCGCAGCATCTGAAATGGTATCTTTGATTATATTCTCGTAGAACCTTTCTGCATCCTATTTACCACATTGCACCACAAATCTCCCAATGTTACTGACTGATCATTTCTCTTAATTCATGCAGACCATTGTCATGCCCGTGAAGCTGTTGGTCCCCGCGGATTATCCGAAAAGCTCTCCGATCCTTGTCGACAATGACGATGAACAGAGGTAATTTGTGTCTGCTGATGCTTTCTTCTATCATCAGTTTGTCCCTGCCTGTGCTTGCTTCACTTGCTGTAACAATGGTCGTCATCTGTACTGCAGGAGGTTGAGTGACATCTCGTACGCGGTCGCCGTGGCATTCGGGCGCGCCGTCGACGAGTTGCTGGAGCCGCGGTCGATCGAGGCGATGGCCATGGCGTGGGATGGCTGCGTGCGGCGGGCCGTCACCGAGGTGGCGCATCGGCACGGCGGAGGAACGTTCAGCTCGAGGCACAACCAGTGGAGGGCCGGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015818

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA015818&oldid=64712"