BGIOSGA015820

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Revision as of 04:20, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015820| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015820, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA015820

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015820, complete gene.

LocusTag

OSIGBA0131J24.3

Ensembl Transcript ID

BGIOSGA015820-TA

Ensembl Protein ID

BGIOSGA015820-PA

Length

4433

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1801353..1805785

Sequence Coding Region

1801353..1801461,1801580..1801653,1802056..1802466,1802599..1803549,1804184..1804396
,1804714..1804917,1805744..1805785

Genome Context

<gbrowseImage1> name=IndicaChromosome04:1801353..1805785 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:1801353..1805785 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCAGCGTTATCGCACACAGAAGGTGATTCTTCCGGCTTCACAAGAAACAACGATAGGAATGATGATGCAGTTGGTGGGGAAGATTCGACTTCTTCATATCAGCCATGTAACAGTATGAAATGCAAAGATGGTACCCAAATTATGTCTCTTGCAAATGAGGATGTATCAAACCTGGCATCGGATTGTCAAGAGCCGCCTTCAGAATCCAACCATGCTATTTCCCATGGGTCAAATACAGATTCTAAGGAAGAAATGTCATCGGGAAGTGGGTATCGTAGGCAGCAGTCTTGCTTTTCTTCATCAACCTGTTCTTGGAGAAGTTCTTCTGAAGTAGAATCAGTGTCAAGTACTCCAGACGGGTCAGGAGATGTAGTTGGGAACATGAGCGTCAGAAGCAAAACCTTTGAGCGAAGGCCAGATCACATTGCTTCATATCCTTCTGCTAGTCCTGACATAAGAAGGTTGTATGCAGCAGAAGGTAAAGCTGGTTTTACCTTAGATTATCATTCAGAAGAACGCTGGTCCAGAAGATCCAATCAATCTACTGCCTTTCGAACCAGCAATGGTCAATCTATTGAACACCACAGTGAGATAGTTGACATACCTAGACAGGCCAATTCCATGGATGAGACTACTTCCTCTTCAAGTCAATGGAGTTTTGACAATTGGGGACCTTCACTGCCAAGAGGGATGCAGTATGGTGATGAGATCCCTTCTCTGTCTAGTCAGAACTATGGTGCTAGAATCCCCTCGCTTTCAAGTAGACAAAGTTATGGTGATGAGATTCCGTCACTATCTCGCAATTGTAACTACGCGAGTAGACAAAGTTATGGTGATGAGATTCCATCGCTTTCTTCTCGCCATTGTAACTCGTTCTCAAGTAGACAAAGTTATGGTGATGAGATTCCATCACTTTCTCGCCATTGTAACACACGCTCAAGTAGACAAAATTACGGTGATGAGATTCCATTGCTGTCTAACTCTGACTATCAGTGCTACCAAGATAGGATACCTTTGCATCATCGTCAATGGTGCCATGATGCTGAGGCACATCCACAGCTAAACTACGGGCGAGGTGCTTCTCATGGCAATCGTTACTCAAGAGACAGTTTTGTCAGTAGTATTGCTACTAATCAGAGGTTCAAGATGGGCACAGGCAAACATACTGTCACAAGATCTGATCATCATAGGACTATTAAGAACGATAATGTATGCAAACATTCTGATGATACATTGGAGCAAGTTCGTGGTCCCCGTGCAAACAAATTGGAAAATGCAACAAGATCCAAGACACAGGAAGATATCAGAAGTCCTTTGGTCCGTAGGGATCAGTTTAACAGACCAGACTTTATAGTTGAGTATGAACAAGCCAAGTTCTTTATGATAAAGTCATATAGTGAAGATGATATTCATAAAGGTATCAAATACAATGTTTGGGCAAGTACACCACATGGGAACAATAAGCTGGATGCAGCTTTTCGTGAAGCTCAGATTTTAATTAAGGAAAAGGGCAAAAAGTGCCCTGTCTTCCTATTCTTTTCGGTTAATTCCAGTGGCCAGTTTGTAGGATTGGCTGAGATATTAGGCCCTGTTGATTTCAAGAAGACCATGGACTTTTGGAAACTAGATAGATGGAATGGCTTTTTCCCTGTAACCTGGCACATTATAAAGGACATTCCGAATAGGCTCTTCAAACATATAACTCTTGAAAATAATGACAACAGAATTGTTACTTTCAGCAGGGACACTCAGGAGATTGGCCTACTCCAGGGTCTGAAAATGTTGAAAATTTTCAAGGATTATGACCAGGAAACGTCACTTCTGGACGATTTTAATTTTTATGAAGAAAAGGAAAGTGCACGATGTGCCAAAAAGGGAATAAATGCAGAGTCGACACATGAAGCTAGACTATTGTTTTTTGGAACAGGAGCTAGACACTCTGATGACTTCAAATCAATGGAAAATTTAGAGGCAAGCATGGAGAATACAATTTTATATTAA</cdnaseq>

Protein Sequence

<aaseq>MSALSHTEGDSSGFTRNNDRNDDAVGGEDSTSSYQPCNSMKCKDGTQIMSLANEDVSNLASDCQEPPSESNHAISHGSNTDSKEEMSSGSGYRRQQSCFSSSTCSWRSSSEVESVSSTPDGSGDVVGNMSVRSKTFERRPDHIASYPSASPDIRRLYAAEGKAGFTLDYHSEERWSRRSNQSTAFRTSNGQSIEHHSEIVDIPRQANSMDETTSSSSQWSFDNWGPSLPRGMQYGDEIPSLSSQNYGARIPSLSSRQSYGDEIPSLSRNCNYASRQSYGDEIPSLSSRHCNSFSSRQSYGDEIPSLSRHCNTRSSRQNYGDEIPLLSNSDYQCYQDRIPLHHRQWCHDAEAHPQLNYGRGASHGNRYSRDSFVSSIATNQRFKMGTGKHTVTRSDHHRTIKNDNVCKHSDDTLEQVRGPRANKLENATRSKTQEDIRSPLVRRDQFNRPDFIVEYEQAKFFMIKSYSEDDIHKGIKYNVWASTPHGNNKLDAAFREAQILIKEKGKKCPVFLFFSVNSSGQFVGLAEILGPVDFKKTMDFWKLDRWNGFFPVTWHIIKDIPNRLFKHITLENNDNRIVTFSRDTQEIGLLQGLKMLKIFKDYDQETSLLDDFNFYEEKESARCAKKGINAESTHEARLLFFGTGARHSDDFKSMENLEASMENTILY</aaseq>

Gene Sequence

<dnaseqindica>1..109#228..301#704..1114#1247..2197#2832..3044#3362..3565#4392..4433#ATGTCAGCGTTATCGCACACAGAAGGTGATTCTTCCGGCTTCACAAGAAACAACGATAGGAATGATGATGCAGTTGGTGGGGAAGATTCGACTTCTTCATATCAGCCATGTATGTGCCATCGTAATTAGTTTCCAAAACTTTTTGATAGTAATAATTTCTGAATAGCTCAGACAGTCAATTTGTGTTCTACTTCTACTCTGTGGACAATTTCTTTCTCATTCTGCAGGTAACAGTATGAAATGCAAAGATGGTACCCAAATTATGTCTCTTGCAAATGAGGATGTATCAAACCTGGCATCGGTTTGTTCTTTGATTACTCATCCTCTTTTTATACAACACAATCTCTTCAATTAATCTGCTATCGGTGACCAGATTACCTGAAGTGTTATATATCTTTCTAAACTATAAATACTTTGGAGCAGTTAAGTAAAGAAACTAATAGGACCCAAGAGATGTTGTACTAATGGCGCGATTGGTTTATAAATAAATCTGTAGTTAGATTTCTGGTTGTACCATCACTCCATCAGAAATAGGATCATGTGTACTTGACTAAGATAGCACAGCGAACAAAATCGTTGTTCAGTAATTATGTGCTAAGACAAGTATGAGTTAATTCAAACATTAAATCTGTGGATAGCATGCCCTAGATCCAAACATAGCAATTTTGTTTAACAACATACAAACAACTCTTCCCTTTCTCAGGATTGTCAAGAGCCGCCTTCAGAATCCAACCATGCTATTTCCCATGGGTCAAATACAGATTCTAAGGAAGAAATGTCATCGGGAAGTGGGTATCGTAGGCAGCAGTCTTGCTTTTCTTCATCAACCTGTTCTTGGAGAAGTTCTTCTGAAGTAGAATCAGTGTCAAGTACTCCAGACGGGTCAGGAGATGTAGTTGGGAACATGAGCGTCAGAAGCAAAACCTTTGAGCGAAGGCCAGATCACATTGCTTCATATCCTTCTGCTAGTCCTGACATAAGAAGGTTGTATGCAGCAGAAGGTAAAGCTGGTTTTACCTTAGATTATCATTCAGAAGAACGCTGGTCCAGAAGATCCAATCAATCTACTGCCTTTCGAACCAGCAATGGTCAATCTATTGAACACCACAGTGAGGTATGGTTGTGGATCCCTTTGACTACACAATAAATTTTGTCTATATATACAGTTTCTGTATTTGGCATGTCTATTAAACGATTAAAGACTGTATATGGGTGTTTACTAATTTTAGTTTTATCATCAAAACAGATAGTTGACATACCTAGACAGGCCAATTCCATGGATGAGACTACTTCCTCTTCAAGTCAATGGAGTTTTGACAATTGGGGACCTTCACTGCCAAGAGGGATGCAGTATGGTGATGAGATCCCTTCTCTGTCTAGTCAGAACTATGGTGCTAGAATCCCCTCGCTTTCAAGTAGACAAAGTTATGGTGATGAGATTCCGTCACTATCTCGCAATTGTAACTACGCGAGTAGACAAAGTTATGGTGATGAGATTCCATCGCTTTCTTCTCGCCATTGTAACTCGTTCTCAAGTAGACAAAGTTATGGTGATGAGATTCCATCACTTTCTCGCCATTGTAACACACGCTCAAGTAGACAAAATTACGGTGATGAGATTCCATTGCTGTCTAACTCTGACTATCAGTGCTACCAAGATAGGATACCTTTGCATCATCGTCAATGGTGCCATGATGCTGAGGCACATCCACAGCTAAACTACGGGCGAGGTGCTTCTCATGGCAATCGTTACTCAAGAGACAGTTTTGTCAGTAGTATTGCTACTAATCAGAGGTTCAAGATGGGCACAGGCAAACATACTGTCACAAGATCTGATCATCATAGGACTATTAAGAACGATAATGTATGCAAACATTCTGATGATACATTGGAGCAAGTTCGTGGTCCCCGTGCAAACAAATTGGAAAATGCAACAAGATCCAAGACACAGGAAGATATCAGAAGTCCTTTGGTCCGTAGGGATCAGTTTAACAGACCAGACTTTATAGTTGAGTATGAACAAGCCAAGTTCTTTATGATAAAGTCATATAGTGAAGATGATATTCATAAAGGTATCAAATACAATGTTTGGGCAAGTACACCACATGGGAACAATAAGCTGGATGCAGCTTTTCGTGAAGCTCAGATTTTAATTAAGGAAAAGGGCAAAAAGTGCCCTGTCTTCCTATTCTTTTCGGTTAGTGATCAAATTCTATTCTTGTTATATGGCCCTTTATTTTCATGGTTTAGTATTTTAAGCCCTTAAGGGCATGTGTCCTCATTTTCTTGCATGTAATCCAAATGGTTATGAAACAATTATGACAGCATAGTTACATAGATAGTGTAATCTATCACTCTACAACCTACACGTGGAAAAAAAATACATTACATACAAGAAACAAGAGCACGTGCTGGTACGCTTAAAACCCATCTCCAATAATGGATGTTTGAGCAAAATAGTTGACATAACGGCAAGTTTCTATTATAAGATTGAACTGCTGTTTACTAGCACGTTTTTGACTTTTCTGTCTTTCTAAATATTTGTTTTCTTTATTAGTATATTCGTTGGGTTGATTATTTCATCTGTATCGTGTGATCTCCTTAAAAGGCAATTTTACTTGAAATTACATTGCAGATACATCTGCCATTAAATTTTGTGATGAATTTCTCCAGAAGAGAGAGACTTAATCCACCACATATACTTTGTGCTGCTGAAAGTTTGAATTACACACCTTTTGCGCTGGATGGTACTATGGCTATTTTATATCATGCATCCCTTCATCCCCTGGCAAAATTTCAAGATAGTTGCTTCTTTGTGTTCCCTATTTCAGGTTAATTCCAGTGGCCAGTTTGTAGGATTGGCTGAGATATTAGGCCCTGTTGATTTCAAGAAGACCATGGACTTTTGGAAACTAGATAGATGGAATGGCTTTTTCCCTGTAACCTGGCACATTATAAAGGACATTCCGAATAGGCTCTTCAAACATATAACTCTTGAAAATAATGACAACAGAATTGTTACTTTCAGCAGGGACACTCAGGAGGTACCATGCATCCACTTCTTTGTTTTTTCGTGCTGAAAAATTCCATCACGTATGGTTGTTTCATTTAGAAAATGGATGGTTTCCCCTATTTTGGTACATAGCACATCACTTCAAGATAAGTTTATTCTGTAATAAATTCCATGGTAGCAGGTGTACTGAGATTCCTCCTGTGAACAAAGGCGGTGCTATCTGATAATGAATGCTATATCTCACATCATTTATCCGTGCTCTCTTTAATATGTTTTCATATGACTTAATTTTGTAATTTCTTAGTTTCTAAACCTTTTTGATCTGATATCCTTTTTCACGTTATGTAGATTGGCCTACTCCAGGGTCTGAAAATGTTGAAAATTTTCAAGGATTATGACCAGGAAACGTCACTTCTGGACGATTTTAATTTTTATGAAGAAAAGGAAAGTGCACGATGTGCCAAAAAGGGAATAAATGCAGAGTCGACACATGAAGCTAGACTATTGTTTTTTGGAACAGGAGCTAGACACTCTGATGACTTCAAATCAATGGTATGTGCATTTTTATTTAAAGCTGTGTGATATCAACTAAGGTTCCGTTTGACATTGAGGTGGATTATGATAATTTTATTTAGTGTGACTGCTTCTAGTAGTTTTGGCATTTGGTAGACTGTTTTTTCTTTTAATTTAAGTAGCAGAAGCAATTGTGGGAGACATGACAGTTGCTTAACATATTTTCTCTAACTTTACATTGATTTGTAAGACGACTACAATGACTATAAATGTACATCTCTACAGCAACTTAAAAACCAAGCACAATTAGCATGGCATAGCATAGCAACCATAAACTGAGCCTAAGTAATATCTTTTAATAATCGCGGCATGTAAAGAGGACAGTCAATCTTATTGTGTAGCTGCTTCTGATGGAAATTTTCCTGGTTCCCGAGTGTGTCTGTTTTGGTCTATATGTCCAAATTCGACCTGTTTTCTACGCAGTCATCGGAATACATGAGTTTGTGATAGCTCAGTATTCAGAAAACCAAACAAATTACAGATGATACAAAAAGAAGGCAAAAACCTAAGAGGATAAGTCTGGCACTCGGTTACGGCACAAGTTCACGGTTATCACCGAGTTTCAATAACCACTCTTGAAAATAATTAAAAATATAGAAAGCAGACTAAAAAATGGCATGCTTGATTTTTTTTTTCTATTTTTCTGGGGAATCCCCAGTTATGACACATGGTGCAGGGCTTGGCTCAGTAATGCAAACATGAACACCGATAGTGTGTAGCTGCTGTTATTATATTGACCTTTTTTTTGGAGAGCTGTGCATCATTATATTGACATATTTCTGATGATGTTTATTTTCATTTGTAGGAAAATTTAGAGGCAAGCATGGAGAATACAATTTTATATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015820