BGIOSGA015825

From RiceWiki
Revision as of 04:20, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015825| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015825, complete gene.| tag = OS04G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015825

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015825, complete gene.

LocusTag

OS04G0132500

Ensembl Transcript ID

BGIOSGA015825-TA

Ensembl Protein ID

BGIOSGA015825-PA

Length

5160

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1972413..1977572

Sequence Coding Region

1972413..1975329,1975983..1976515,1977549..1977572

Genome Context

<gbrowseImage1> name=IndicaChromosome04:1972413..1977572 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:1972413..1977572 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACTTCCTTCTCCTCCTCTTACTCCACCTCCTCTCCTTCTCCTCCTCCACCGCCGCCTCGGCTTCATCGGAGGTCGCCTTCCTGACGCAATGGCTCAACACCACGGCGGCGCGGCCGCCGGACTGGTCGCCGTCGGCGTCGTCGCCGTGCAAGTGGTCGCACGTCGGCTGCGACGCCGCCACGGGGAGCGTCACCTCCGTCACGTTCCAGTCGGTGCACCTCGCCGCGCCGCTCCCCCCCGGCATCTGCCCCGCGCTCCCGTCGCTCGCGTCGCTCGTCGTCTCCGACGCCAACCTCACCGGCGGCGTCCCCGACGACCTCCACCTGTGCCGCCGCCTCGCCGTGCTCGACCTCAGCGGCAACTCGCTCTCCGGCCCCATCCCGGCCTCGCTCGGGAACGCGACGGCCATGGCGTCGCTGGCGCTCAACTCCAACCAGCTCTCGGGCCCAATCCCGGCGTCGCTCGGCAACCTCGCCGCGTCGCTCAGGGACCTCCTGCTCTTCGACAACCGCCTCTCCGGCGAGCTCCCGGCGTCGCTCGGCGAGCTGCGGCTGCTCGAGTCGCTGCGCGCCGGCGGCAACCGTGACCTCGGCGGCGAGATCCCGGAGTCGTTCTCGAGGCTCTCCAACCTCGTCGTGCTCGGCCTCGCCGACACCAAGATCTCCGGCGCGCTCCCGGCGTCGCTGGGGCGGCTCCAGAGCTTGCAGACGCTGTCCATCTACACGACGATGCTGTCCGGCTCCATCCCGGCGGAGCTCGCCGGCTGCGGCAACCTCACCAACGTCTACCTCTACGAGAACTCGCTCTCCGGCCCGCTCCCGCCGTCGCTGGGCGCGCTGCCGCGGCTGCAGAAGCTGCTGCTATGGCAGAACTCGCTGACGGGGCCCATCCCGGACACCTTCGGCAACCTCACCTCCCTCGTCTCCCTCGACCTCTCCATCAACGCCATCTCCGGCGCCATCCCGGCGTCGCTCGGCCGCCTCCCGGCGCTGCAGGACCTCATGCTCAGCGACAACAACCTCACGGGGACCATCCCGCCGGCGCTGGCGAACGCGACGTCGCTCGTCCAGCTCCAGCTCGACACCAACGCCATCTCCGGCCTCATCCCGCCGGAGCTCGGCCGCCTCGCCGCGCTGCAGGTGGTGTTCGCGTGGCAGAACCAGCTCGAGGGCTCCATCCCGGCGTCGCTCGCCGGCCTCGCCAACCTCCAGGCGCTCGACCTCTCGCACAACCACCTCACCGGCGCCATTCCCCCCGGGATCTTCTTGCTCCGCAACCTCACCAAGCTGCTCCTCCTCTCCAACGACCTCTCCGGCGTCATCCCGCCGGAGATCGGCAAGGCGGCGAGCCTCGTGCGGCTGCGGCTAGGAGGAAACCGGCTCGCCGGGACGATCCCGGCGGCGGTGGCCGGGATGAGGAGCATCAACTTCCTCGACCTCGGCAGCAACCGCCTCGCCGGCGGCGTCCCCGCCGAGCTCGGCAACTGCTCGCAGCTCCAGATGCTCGACCTCAGCAACAACACGCTCACCGGCGCGCTGCCGGAGTCGCTCGCCGGCGTCCGCGGCCTGCAGGAGATCGACGTGTCACACAACCAGCTCACCGGCGGCGTCCCCGACGCGTTCGGGAGGCTGGAGGCGCTCAGCCGCCTCGTCCTCAGCGGCAACTCGCTCTCCGGCGCCATCCCGGCGGCGCTGGGAAAGTGCCGCAACCTCGAGCTCCTCGACCTCAGCGACAACGCCCTCTCCGGCCGCATCCCCGACGAACTGTGCGCCATTGATGGCCTCGACATCGCGCTCAACCTCAGCCGGAACGGGCTCACCGGGCCGATCCCGGCGAGGATCTCGGCGCTGAGCAAGCTCTCGGTGCTCGACCTGTCGTACAACGCGCTCGACGGCGGCCTCGCGCCGCTCGCCGGCCTCGACAACCTCGTCACGCTCAACGTGTCCAACAACAACTTCACCGGCTACCTCCCGGACACGAAGCTGTTCCGGCAGCTGTCGACGTCGTGCCTCGCCGGCAACTCCGGGCTCTGCACCAAGGGCGGCGACGTGTGCTTCGTCAGCATCGACGCCAGCGGGAGGCCGGTGATGAGCGCCGACGAGGAGGAGGTGCAGCGGATGCACCGGCTCAAGCTCGCCATCGCGCTGCTGGTGACGGCGACGGTGGCGATGGTGCTGGGCATGGTCGGGATCCTCCGGGCGCGCGGGATGGGCATCGTCGGCGGGAAGGGCGGGCACGGCGGCGGGAGCAGCGACTCGGAGTCCGGCGGCGACCTGGCGTGGCCGTGGCAGTTCACGCCGTTCCAGAAGCTGAGCTTCAGCGTCGAGCAGGTGGTGCGCAACCTCGTCGACGCCAACATCATCGGCAAGGGCTGCTCCGGCGTGGTGTACCGCGTCGGCCTCGACACCGGCGAGGTCATCGCCGTCAAGAAGCTCTGGCCAAGCACCCGCAACGGCGCCGACAAGGACGACGTCGCCGGCGGCGGGCGCGTCCGCGACTCGTTCTCGGCGGAGGTGAGGACGCTGGGGTGCATCCGGCACAAGAACATCGTGAGGTTCCTCGGCTGCTGCTGGAACAAGACGACACGGCTGCTCATGTACGACTACATGGCGAACGGTAGCCTGGGTGCTGTGCTCCACGAGCGCCGCCATGGCGGCCATGGCGGCGGCGGCGCGCAGCTGGAGTGGGATGTGAGGTACAGGATCGTGCTCGGTGCGGCGCAGGGGCTCGCGTACCTGCACCACGACTGCGTGCCGCCGATCGTGCACCGCGACATCAAGGCCAACAACATCCTCATCGGGCTCGACTTCGAGGCCTACATCGCCGACTTCGGCCTCGCCAAGCTCGTCGACGACGGCGACTTTGGCCGCTCGTCCAACACCGTCGCCGGATCATATGGCTACATCGCCCCAGAGTACGGGTACATGATGAAGATAACGGAGAAAAGCGACGTGTACAGCTACGGGGTGGTGGTGCTGGAGGTGCTCACCGGGAAGCAGCCCATCGACCCCACCATCCCCGACGGCCAGCACGTCGTCGACTGGGTCCGCCGCCGGAAGGGCGCCACCGACGTGCTCGACCCGGCGCTGCGCGGCCGCTCCGACGCCGAGGTCGACGAGATGCTGCAGGTCATGGGCGTCGCCCTCCTCTGCGTCGCCCCTTCCCCCGACGACCGCCCCGCCATGAAGGACGTCGCCGCCATGCTCAACGAGATCCGCCTCGACCGCGACGACTACGCCAACGTCGACCTCCTCCTCCAGTCCGGCGCCGCCGCCGCCTCGCCGCCTCGCGCCGCCGCCGCCGCCACGTCGACGTCGTCGAGCACGCCGCCGAGCAGCAGCAGCTTCTCCGGCTCATCCGCCATGATCTACAACTCATCATCCAAGGCCAAGTCGCCATTCGACTGCAACCACCATATAACTCTGAACAGAAAACATAAGAAAAATGTTGACGTGATGAAAAATGACTGA</cdnaseq>

Protein Sequence

<aaseq>MHFLLLLLLHLLSFSSSTAASASSEVAFLTQWLNTTAARPPDWSPSASSPCKWSHVGCDAATGSVTSVTFQSVHLAAPLPPGICPALPSLASLVVSDANLTGGVPDDLHLCRRLAVLDLSGNSLSGPIPASLGNATAMASLALNSNQLSGPIPASLGNLAASLRDLLLFDNRLSGELPASLGELRLLESLRAGGNRDLGGEIPESFSRLSNLVVLGLADTKISGALPASLGRLQSLQTLSIYTTMLSGSIPAELAGCGNLTNVYLYENSLSGPLPPSLGALPRLQKLLLWQNSLTGPIPDTFGNLTSLVSLDLSINAISGAIPASLGRLPALQDLMLSDNNLTGTIPPALANATSLVQLQLDTNAISGLIPPELGRLAALQVVFAWQNQLEGSIPASLAGLANLQALDLSHNHLTGAIPPGIFLLRNLTKLLLLSNDLSGVIPPEIGKAASLVRLRLGGNRLAGTIPAAVAGMRSINFLDLGSNRLAGGVPAELGNCSQLQMLDLSNNTLTGALPESLAGVRGLQEIDVSHNQLTGGVPDAFGRLEALSRLVLSGNSLSGAIPAALGKCRNLELLDLSDNALSGRIPDELCAIDGLDIALNLSRNGLTGPIPARISALSKLSVLDLSYNALDGGLAPLAGLDNLVTLNVSNNNFTGYLPDTKLFRQLSTSCLAGNSGLCTKGGDVCFVSIDASGRPVMSADEEEVQRMHRLKLAIALLVTATVAMVLGMVGILRARGMGIVGGKGGHGGGSSDSESGGDLAWPWQFTPFQKLSFSVEQVVRNLVDANIIGKGCSGVVYRVGLDTGEVIAVKKLWPSTRNGADKDDVAGGGRVRDSFSAEVRTLGCIRHKNIVRFLGCCWNKTTRLLMYDYMANGSLGAVLHERRHGGHGGGGAQLEWDVRYRIVLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLDFEAYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGQHVVDWVRRRKGATDVLDPALRGRSDAEVDEMLQVMGVALLCVAPSPDDRPAMKDVAAMLNEIRLDRDDYANVDLLLQSGAAAASPPRAAAAATSTSSSTPPSSSSFSGSSAMIYNSSSKAKSPFDCNHHITLNRKHKKNVDVMKND</aaseq>

Gene Sequence

<dnaseqindica>1..2917#3571..4103#5137..5160#ATGCACTTCCTTCTCCTCCTCTTACTCCACCTCCTCTCCTTCTCCTCCTCCACCGCCGCCTCGGCTTCATCGGAGGTCGCCTTCCTGACGCAATGGCTCAACACCACGGCGGCGCGGCCGCCGGACTGGTCGCCGTCGGCGTCGTCGCCGTGCAAGTGGTCGCACGTCGGCTGCGACGCCGCCACGGGGAGCGTCACCTCCGTCACGTTCCAGTCGGTGCACCTCGCCGCGCCGCTCCCCCCCGGCATCTGCCCCGCGCTCCCGTCGCTCGCGTCGCTCGTCGTCTCCGACGCCAACCTCACCGGCGGCGTCCCCGACGACCTCCACCTGTGCCGCCGCCTCGCCGTGCTCGACCTCAGCGGCAACTCGCTCTCCGGCCCCATCCCGGCCTCGCTCGGGAACGCGACGGCCATGGCGTCGCTGGCGCTCAACTCCAACCAGCTCTCGGGCCCAATCCCGGCGTCGCTCGGCAACCTCGCCGCGTCGCTCAGGGACCTCCTGCTCTTCGACAACCGCCTCTCCGGCGAGCTCCCGGCGTCGCTCGGCGAGCTGCGGCTGCTCGAGTCGCTGCGCGCCGGCGGCAACCGTGACCTCGGCGGCGAGATCCCGGAGTCGTTCTCGAGGCTCTCCAACCTCGTCGTGCTCGGCCTCGCCGACACCAAGATCTCCGGCGCGCTCCCGGCGTCGCTGGGGCGGCTCCAGAGCTTGCAGACGCTGTCCATCTACACGACGATGCTGTCCGGCTCCATCCCGGCGGAGCTCGCCGGCTGCGGCAACCTCACCAACGTCTACCTCTACGAGAACTCGCTCTCCGGCCCGCTCCCGCCGTCGCTGGGCGCGCTGCCGCGGCTGCAGAAGCTGCTGCTATGGCAGAACTCGCTGACGGGGCCCATCCCGGACACCTTCGGCAACCTCACCTCCCTCGTCTCCCTCGACCTCTCCATCAACGCCATCTCCGGCGCCATCCCGGCGTCGCTCGGCCGCCTCCCGGCGCTGCAGGACCTCATGCTCAGCGACAACAACCTCACGGGGACCATCCCGCCGGCGCTGGCGAACGCGACGTCGCTCGTCCAGCTCCAGCTCGACACCAACGCCATCTCCGGCCTCATCCCGCCGGAGCTCGGCCGCCTCGCCGCGCTGCAGGTGGTGTTCGCGTGGCAGAACCAGCTCGAGGGCTCCATCCCGGCGTCGCTCGCCGGCCTCGCCAACCTCCAGGCGCTCGACCTCTCGCACAACCACCTCACCGGCGCCATTCCCCCCGGGATCTTCTTGCTCCGCAACCTCACCAAGCTGCTCCTCCTCTCCAACGACCTCTCCGGCGTCATCCCGCCGGAGATCGGCAAGGCGGCGAGCCTCGTGCGGCTGCGGCTAGGAGGAAACCGGCTCGCCGGGACGATCCCGGCGGCGGTGGCCGGGATGAGGAGCATCAACTTCCTCGACCTCGGCAGCAACCGCCTCGCCGGCGGCGTCCCCGCCGAGCTCGGCAACTGCTCGCAGCTCCAGATGCTCGACCTCAGCAACAACACGCTCACCGGCGCGCTGCCGGAGTCGCTCGCCGGCGTCCGCGGCCTGCAGGAGATCGACGTGTCACACAACCAGCTCACCGGCGGCGTCCCCGACGCGTTCGGGAGGCTGGAGGCGCTCAGCCGCCTCGTCCTCAGCGGCAACTCGCTCTCCGGCGCCATCCCGGCGGCGCTGGGAAAGTGCCGCAACCTCGAGCTCCTCGACCTCAGCGACAACGCCCTCTCCGGCCGCATCCCCGACGAACTGTGCGCCATTGATGGCCTCGACATCGCGCTCAACCTCAGCCGGAACGGGCTCACCGGGCCGATCCCGGCGAGGATCTCGGCGCTGAGCAAGCTCTCGGTGCTCGACCTGTCGTACAACGCGCTCGACGGCGGCCTCGCGCCGCTCGCCGGCCTCGACAACCTCGTCACGCTCAACGTGTCCAACAACAACTTCACCGGCTACCTCCCGGACACGAAGCTGTTCCGGCAGCTGTCGACGTCGTGCCTCGCCGGCAACTCCGGGCTCTGCACCAAGGGCGGCGACGTGTGCTTCGTCAGCATCGACGCCAGCGGGAGGCCGGTGATGAGCGCCGACGAGGAGGAGGTGCAGCGGATGCACCGGCTCAAGCTCGCCATCGCGCTGCTGGTGACGGCGACGGTGGCGATGGTGCTGGGCATGGTCGGGATCCTCCGGGCGCGCGGGATGGGCATCGTCGGCGGGAAGGGCGGGCACGGCGGCGGGAGCAGCGACTCGGAGTCCGGCGGCGACCTGGCGTGGCCGTGGCAGTTCACGCCGTTCCAGAAGCTGAGCTTCAGCGTCGAGCAGGTGGTGCGCAACCTCGTCGACGCCAACATCATCGGCAAGGGCTGCTCCGGCGTGGTGTACCGCGTCGGCCTCGACACCGGCGAGGTCATCGCCGTCAAGAAGCTCTGGCCAAGCACCCGCAACGGCGCCGACAAGGACGACGTCGCCGGCGGCGGGCGCGTCCGCGACTCGTTCTCGGCGGAGGTGAGGACGCTGGGGTGCATCCGGCACAAGAACATCGTGAGGTTCCTCGGCTGCTGCTGGAACAAGACGACACGGCTGCTCATGTACGACTACATGGCGAACGGTAGCCTGGGTGCTGTGCTCCACGAGCGCCGCCATGGCGGCCATGGCGGCGGCGGCGCGCAGCTGGAGTGGGATGTGAGGTACAGGATCGTGCTCGGTGCGGCGCAGGGGCTCGCGTACCTGCACCACGACTGCGTGCCGCCGATCGTGCACCGCGACATCAAGGCCAACAACATCCTCATCGGGCTCGACTTCGAGGCCTACATCGCCGACTTCGGCCTCGCCAAGCTCGTCGACGACGGCGACTTTGGCCGCTCGTCCAACACCGTCGCCGGATCATATGGCTACATCGCCCCAGGTAAGTTTTTTCTTTAAGATAATGGAAGCTTTATTGAAACTTATTCAATTACATCAAGATGATACAACCAATTGAGCCCACTCCGCGTAAAATTCACGCAACCAAAAAGGACAAACCACCCATCTTAAGCACAAATGTTGAACAGAATCATATAGTTCAGTGGCTTTCAATACTATGTCACAAAAGTTACTTCAATCTTTCACCTTCTGATTAACAAACAATCTGAACTGAAAATGGTTCAATCTTTGATCTTCTGATTAGCAATGTTAACTGAAAATGGCGTCTTAATTAAAGCTTCAGTACATGATCTTTTCATTAGCAATCTGAACCAAAAAAAAATCGTTTCTTCATCAGAGCTTAAATCTTTCACCTTCTGATTAACAACAATCTGAACTAAAATTGTCTCTTCATTAAAGCTTCAATCTTGGATCATCTGATCAACAATCTGAACCAAAAAAGAAGAAAAAATCTTGATTAAATCTCCAACCTTCGATCTTCTGATGAACATTCTGAAAAACAAATTTCTTGATTCAATTTGATGAACAAAAATGTCTTGGATAATCTCATCAACAATCCGAACAAAAAAGAAAAACGAATTCCTGATCAAACCTGATGAGCAAAAAAAAAATGTGTTTACAAAAAAAACATTGCAGAGTACGGGTACATGATGAAGATAACGGAGAAAAGCGACGTGTACAGCTACGGGGTGGTGGTGCTGGAGGTGCTCACCGGGAAGCAGCCCATCGACCCCACCATCCCCGACGGCCAGCACGTCGTCGACTGGGTCCGCCGCCGGAAGGGCGCCACCGACGTGCTCGACCCGGCGCTGCGCGGCCGCTCCGACGCCGAGGTCGACGAGATGCTGCAGGTCATGGGCGTCGCCCTCCTCTGCGTCGCCCCTTCCCCCGACGACCGCCCCGCCATGAAGGACGTCGCCGCCATGCTCAACGAGATCCGCCTCGACCGCGACGACTACGCCAACGTCGACCTCCTCCTCCAGTCCGGCGCCGCCGCCGCCTCGCCGCCTCGCGCCGCCGCCGCCGCCACGTCGACGTCGTCGAGCACGCCGCCGAGCAGCAGCAGCTTCTCCGGCTCATCCGCCATGATCTACAACTCATCATCCAAGGCCAAGTCGCCATTCGACTGCAACCACCATATAACTCTGAACAGAAAACATAAGAAAAATGTTTGTGCCTTCTTGGGCTGTTTGATGATCTTACATGTGTTTGTGGTGGAGAATTTGATGCGAGTTTGTTGTGAATTTGTGATGGTAGGTGGTGAGCTGTGTAAATGAATGGGGGGAAGAGGAGGAGAAGGATAGGCTGTTTGAATTCGTTTCTTTTTGTTTTGTTTTTGGAGAGTAGAAGTAGATGGAGCTGAGGAATTAGGAAGAACTAGAACCTGCAGAAGCAAAAAGCTTGATGGCTTTGTTTTGTTAGTGTTCAGTGTATGCCTGTTGAATAAAGATCCAAGATTACCTTACATTCCTAATCTGGCTATGCAGATGCTCAGGATTATTGTTCCACTTCAGATTAATCAAGAATGGTTATCCAATACATGTAGAATTAGTTTCACATCTGTAGGAAATGCAGTTCCAGGGTTTTGTTCTTCAGCAGTCAGTTCGGAACCTCTGAAGTGAAATCCTGTTACTTCAGTGGTCCAAGTCTACAGATAGCTCAATTGAATGATTCAAAAAATGGCTAGACATTTCAATTTTGAAACTTGGATTCAGAGTTTCAGGTTACCTGAAACATACATACTGTACATCCCAAGTCCAAAGCATGATCCTGCGCGGAGTGCGGGCGGACAATAATTGAAAGAATTAACAGCTGAAATTTTCAACACATAACTAAATTTTGACAGCAAATTCCAAAAGTCATCACTGATTATGAGGGCCTTTCATGACAACTCTTTTGCCCCAGACTCAAGCCTCCATCCCTATTGACCACTGGTTGGTGTAACATGTACCAGTAAATATTAAGACCTACTCCAGGATTCAACAGAGCAATTATTTTTGAGACTGACAATTATGAAAACTCAGTTGAACCATACTGTATACCCTAGTGAAAAAAGTTACCATGACTGGCCTGCTGCTGTTCATTTTCGTCAGTTACCCTCATATTGGGCAATGGTCATAGGCTGTGTTTAGTTCAGCGCAAAGTTTGGATTTTGATTTATATTGGAGATGATGTGACTGAAAAGTTGTGTGTGTATGACAGGTTGACGTGATGAAAAATGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015825