Os12g0641500
| Gene Name |
Os12g0641500 |
|---|---|
| Description |
SMC protein, N-terminal domain containing protein |
| Version |
NM_001073936.1 GI:115489833 GeneID:4352932 |
| Length |
10592 bp |
| Definition |
Oryza sativa Japonica Group Os12g0641500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:27745471..27756062 |
| Sequence Coding Region |
27745471..27745519,27745618..27745833,27746239..27746490,27747011..27747390,27747530..27747639 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:27745471..27756062 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:27745471..27756062 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>tattatacatttgaccgtgctttggagaaagcggttctgtatgctgttggaaatacgcttgtctgtgatgaacttgatgaagcgaaaaccttaagttggagtggtgaaaggtacaaggttgttaccgtcgatgggattcttctgactaaatcgggcacgatgactggtggaataagcggtggaatggcagctagatctaataaatgggatgacagcataatagaatcttggaagaagaagaaaaatcagtatgaatctgaaatgtcagaacttggatcccccagggagttacagagaaaggagcttgctgtgtctgagaaaataactggacttgagaaaaagttacattacttgaatgttgaagagaataatctcagggagaagctacgcagattggaatctgagaagagtaatatagaggaagagatcgatcgtcttgagccagtaaaggaggagttggagacccgtattggtaaaaaggaacgggaagtgagagttcttgagaaaaaaataaatgagattgtggaccgtatttacaaagattttagcaagtcagttggggtgaagaacatccgtgaatatgaagagaggcaacttaaagatgctcaagcactacaggagaggaagctaagcctgagtaatcaaatgtcaaaattgaaataccagctggaatatgaacaaaaacgagatatgcaggcaccaattattaaattaaaggagacacgtgaatctctagagaaggaacttaagagtttacaggagagagagtctgaagctagggcggaagctgaacaaatttcaaatcagatggaagagctgaaagctgaggctgaattgcaactctattccccaatcttccatctaaagagcacttctcttttgcgattcttccactggaaatccaagtctgatgaatgtgaaacgggtattgatgaactgaaggagaagaatggtagtgttgctgcagctttggcaaagctggatcgccaagtgaagtcaaaggaagggaagcttgtgcaacttagatcacaggaacgggagattcatgagaagtgtgaactggagcaactgaagcttcctacagttaatgatccaatggatactggatcatcttcacaaataccaatccttgactacagtcagcttagcgaaaactacctacaagatatgcggctttctgaacgtgacaaacttgaggcagagttcaaaaaaaaaataggggatctagttgctcagattgagcacactgctccaaacctgaaagcgctcgaccaatatgaaacattgcaaaggaaggaaaaggatgttatggaaaagtttgaagcagcaagaaaagaagagctggagatagctgacaagtacaattctgtcaagcaacgaaggtatgagctgttcatggaagcctttgatcacatatcaaaaggcatagaccaaatctataaggagttaacaaaaagtcaaacacatctacttggaggaacagcatatttaaatctagaaaatgaagatgagccatttttacatggaatcaagtacacagctatgcctccgacaaagcgctttagagatatggaacagttatctggtggtgagaagactgtcgctgccctggcattgctttttgccattcacaggccatccccattcttcatattggatgaagttgatgctgctctggataatttaaatgttgccaaggttgctgggtttatcagatcaaagtcatgccagcgcgttgatgaacaagataatggaggatgtggatttcagagcatcgttatatcgctgaaggacagtttctatgacaaagctgaagcgctggttggtgtttatagggactcagaacgatgttgctcgagaaccctaaccttcgacctgacgaagtatagagaagcatga</cdnaseq> |
| Protein Sequence |
<aaseq>YYTFDRALEKAVLYAVGNTLVCDELDEAKTLSWSGERYKVVTVD GILLTKSGTMTGGISGGMAARSNKWDDSIIESWKKKKNQYESEMSELGSPRELQRKEL AVSEKITGLEKKLHYLNVEENNLREKLRRLESEKSNIEEEIDRLEPVKEELETRIGKK EREVRVLEKKINEIVDRIYKDFSKSVGVKNIREYEERQLKDAQALQERKLSLSNQMSK LKYQLEYEQKRDMQAPIIKLKETRESLEKELKSLQERESEARAEAEQISNQMEELKAE AELQLYSPIFHLKSTSLLRFFHWKSKSDECETGIDELKEKNGSVAAALAKLDRQVKSK EGKLVQLRSQEREIHEKCELEQLKLPTVNDPMDTGSSSQIPILDYSQLSENYLQDMRL SERDKLEAEFKKKIGDLVAQIEHTAPNLKALDQYETLQRKEKDVMEKFEAARKEELEI ADKYNSVKQRRYELFMEAFDHISKGIDQIYKELTKSQTHLLGGTAYLNLENEDEPFLH GIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFAIHRPSPFFILDEVDAALDNLNVAK VAGFIRSKSCQRVDEQDNGGCGFQSIVISLKDSFYDKAEALVGVYRDSERCCSRTLTF DLTKYREA</aaseq> |
| Gene Sequence |
<dnaseqindica>10544..10592#10230..10445#9573..9824#8673..9052#8424..8533#8072..8129#7702..7870#7291..7499#7118..7207#6471..6610#6272..6379#5994..6109#5795..5796#atggccgcggcggcggcaggcaaaggcggcggcgggcaggggcgcatccatcggctggaggtggagaacttcaagtcgtataaggggacgcagacaatcgggcccttcttcgacttcacggccatcatcggtcccaatggcgccggcaagtccaacctcatggatgccataagctttgtgctcggcgttcgatccgcccacctccgaggcgcccagctcaaggacctcatctacgccctcgacgaccgcgataaggaggccaagggccgcagagcctccgtccgcctcgtctaccacctccccgccaccggggacgagctccacttcacccgcgcaatcaccggcgccggtggcagcgagtaccggatcgacggccgtctcgtcacctgggacgactacaacgccaaactcagatccctgggcatcctcgtcaaggctcgcaatttcctcgtcttccaggtcagatgtccctaatttaacattttcctcatacaactcctccctgattaattatatagcactaaataaatttatgaattaccatttgcaccgcagggtgatgtggaatccattgcctccaagaatcccaaggagctcaccgcacttctggagcagatctctggctctgacgagctcaggagagaatatgacgagctggaggaccaaaaaaacagggccgaagagaagtctgcgcttatttatcaagagaaaaggaccatcgtcatggaaaggaagcagaaaaaggctcaaaaggaagaggcagagaatcatctacgcctccagcaggacttggtaccaacatgattatagtaatcctcactcacagttttaccattgtttattctatacattgttcacattgagttgtgtttcctcacttgtgtccagaaactagccaagacagaacatctcctatggcaactctacaccattgaaaaagatgcagagaaaatagaagctgaacttgaggaggataggcggtctcttcagcaagtgctggaagagaaccagtcctctgactatgagctttctgcaaaaaagaaggagcaaagtgggtttctcaagaaaatgacattatgcgagaagagtatagccaagaaaaagcttgaacttgacaagaaagtaaagtaccttcctgtctatttttcgcttcaccaaactttacttgtggcagttcagtcttgggcttatccgaagaaaatggctagtattgtttcattactcaatacaaacttatggcatgataataggacttcttttcatgtagtatcaaggttttatgtggccatcacgtcactagcaattttactcaatacaaacttatggcatgataataggacttcttttcatgtagtatcaaggttttatgtggccatcacgtcactagcaattttctcccacttcatattgcccggtacccctctagaatctctacatgtgcacattactttgtaaaacttacaactgctgctcccacagtgctctgggtgttttctggctgctgtgttcacttctgcagctatccatgtcgatcggttagctgttagtgtgatttgggaacacagctctctgctctactccacgcctctctgatgtgggccgttgtttagtcattgctacacacacttctgcacatgttggctgttttgctctccgtcctattcatgcattccctgcgcccatgacaagtgggagtaccacctgcttgccagtttccctggttgagctaggcactgtgcccagtaacttttttcttgtgctatgaatattgactgctttacatgtctaaaaatgaacattgtatttgtatatcccacccattcatttgcttttaccctagcctcattacttccactgttgtcaatgaattggatgcttatatggcaccttgtttgtttatggaatcgttcaatgttgcccttttgttattccagtcaaaacaatttccttcttgcagtttagaatctctacttcatgaactgggcacattaaatgtattctaattattactgcatcttttttccctcttcagcaacctgagcttcttagattgaaagagcaaatttctcggctgaaatccaaaatcaaaagctgcaacaaagagatcgacaaaaagaaggatgatagcaagaaacatttggaagagatgaaaagtttgcagagtgctttggttgatgtcacaagagctattgatgagttgaatgagcaaggccaaaataaaagcgacaaactgcaattagctgatgaccaactccaggaatatcatagaatgtgagttcagaagacatcttacatattatgttaagtttaaagttcaattatctttcattaagttcagttatctaatggaagtgggacataatcaccatcatccatcatccatgtacttctctacaaaaacgaattaatggttgtgtgataagattgctactgcttaactgcatgtatcaattataaaaaaaactgtgttttaaatacctagacagccttcttttttttgaatgatgtggctacactagtgctggaaaaaagccttgcttctttatagtcaggacaatccaatattttacaaccacaggtggatacataataccagaccttattggttacggttaagaacgaacctttcattttactatactagcatactgctcaactgcatgatcaattatcaaaaaaaaatcctgtgttttaaagacctagacagccttctcttttctttaatgatgtggctgcgctagagctggaaaaaagtcatgctaagtatagtcaggacaatccaatattttacaaccacgggtggatacatgataccagaccttatttattggctacggttaagaacgaacctttcattttactatactagcatattgcccgtgcattgcaacgggattttaattaaagaaaattatcattaagccgttattaccatcattttacatacataatctcttaatctctgtatatatttgttattgacatgtaggccctttggcctcgcactgtattttttccttcccacaaaaagtaggaagttggtggtgggggtggttgacatgtggaccctttggcccacatgtcatttttactttccaaaaaggtagggagttggtggtgggaatggtggcagattcaccactcaccaccactactcccttttcaaggagtatatacataatctcttaatctctgtatatatttgttactgacatgtaggtcctttggccccgcactatccttttttctttcccacaaaatgtaggaagttggtgctgggggtggttgacatgtggaccctctggcccaatatgtcatttttactttccaagaaggtagggagttggtagtaggtgtggtggcagattcaccaccaccactactcccttttcaaggagtattgatactcagccaaaaataatgttccttttctaatgactcttgatttagttgtggacagttatgacataaatcggtaaatatttttttgttccttagcttgttttattttttctatgcctattgatgtatccctgtgaagattcagtacactttagcattaactttctgttacagtaaggaagatgcgggaatgagtactgcaaaactgagagacgagaaggaagtttttgataaagagcttaatgctggcgttgaagcaaaaaagaatttagaggagaatatgcagcagctgcgtagccgtgagaatgagattttgtcacaagagcgtgaattgcgtgcaaagcttaataaaattcttcattcaatccccaagcatgaagatgagcttgctcacttacgtgaggaacataacaaaattgcaaaggagcgccagacctcagggttagtccgtaccaagtcctttgatcttgatagggtgtctcacatccttaagcacactaatttgcactcaattatcaacggtatgttttacttctattttatacttattacaaatattgtgcagagttaaataccaaatgttgaagcagaggttggatgagatagatacaaaattacgagagctcaaagctgacaagcatgaaagtgagcgggatgctcgattttcagaaacagttaggagtttaaagcggctattccctggagtccatggtcgcatgacagaactttgtaggccttcacagaagaaatacaaccttgctgtcactgttgctatggggaagttcatggatgcagtagtggtagaagatgagaacacaggaaaagaatgcattaaagtacctcttttgtgacttttactcagctgattcttcaacatttttcttatatcgggagagctcattatattatctgcagtagtcaattgtaatacttattttttttttcaaagcgtacctttggaaattaaaatacgtagaacctcttttaatgaaataaaatgaatagcttcacgtgaactgtaaactgttgaaagaagtttgaactgattccattcaaatggatgtgacggtcacatggagggagagtttgtgagtagggcatttgatagatcaatatcatatttggggattctgttgactcacatccattcaaattagtcccatgtaaatttcatcaaataacttatttgagtaatattaagataacctgactatatatgtgatcatggcagctgcagtctcaggtgttggataggtagtaatacaaaatactccctctaatcacaaatatattgcctgttggatatcgacacatcccaaaaatacaacttgaccagcaatttctatttggagttatgatttcattatccatttatgctggttaccctttgatgttcttgtgtaaggtagttatttgttttctacttggatcattgaaatggcaaaaccataaatgtcactttatctcttatgtgctacagtacttgaaggagcaacgccttcctcctcagacatttattcctttacaatcagtccgcgtgaagcctataattgagaagctgcgaacacttggggggtctgcacaattggtctttgatgttattcaatatcctttctttccataaggaggcaattctagtccccccccccaacaatacatggtcttataactttgcagacacacgcacatccacgcaagcacacgtctttttttttaaaaaaattgtgtcttacattagcaatcagtgttttgtcaatactctctggactgtggcactgtgcttttttttgtactctgcctcatttaataatatgcactatttgttatggacatatgggatgtttaccaatggcaataagcaatctgcccataaccatagccaccatagcctttatgagcgttctagttgattaatattttcagtttgttgattatacttcactacattctatatactactttgtcagaggaaaaaaagaaccgtctgcttgtgtcacgatacttcatatcagaaccaagcattttccactgtctgcccttttttaatgctggttcgctccctattttccaccacgctctgcctctgccactagcaatagttttttcgaaaaagcccaaaatttttgaaaaaccctaaaggctaaagctaccagcaacattgctacctgccgttctcacctctatctgcgtcaccccaactattgcatgctgccactgccctatccttctaatgataaaaatattgctgacattgtgttcaccttgcctgatttcttccataaaatgtgccatctgttctttcaccacgtagatccactttatatatggactccattccttgatgtttggcctttcgaagaactgtaaaggctacctttcacttcaatcttgatagtattatacaattttttcatgcttgcctgcccacttgtagtttttgtaggcttgcttgcctgttcattcggagttttgttagaaacagttcttgtgtcaagtgttgcctctttatcagttatccatgaaatgtactttcagcagatcattactatcagctgtggaatagtattctattctatttgctttgcttaacattatacatttgaccgtgctttggagaaagcggttctgtatgctgttggaaatacgcttgtctgtgatgaacttgatgaagcgaaaaccttaagttggagtggtgaaaggtacaagggtaagtgtttggttctgcatatctaaaacagcatttttcttgtttggttatttttactctaactgttctatcatgtgtctgtattgtagttaccatcgatgggattcttctcacttaatcggtctttgatgctaactgttctgtcatgtgtctgtattttagttgttaccgtcgatgggattcttctgactaaatcgggcacgatgactggtggaataagcggtggaatggcagctagatctaataaatgggatgacagcataatagaatgtacgcatgtctcttttaccttgtaaccaacaaacaggcatgcttgttctgtaatttgtcttattggctcttcatacaatttgtgctgcagcttggaagaagaagaaaaatcagtatgaatctgaaatgtcagaacttggatcccccagggagttacagagaaaggagcttgctgtgtctgagaaaataactggacttgagaaaaagttacattacttgaatgttgaagaggtaggtacataagtttgatttctagccaaatactggttgatgacttttcttataaatgtatggcaaaggcagttcattggtatgcttgctccaaaattctgagccccctgaaagagatatcatcaatgatagttgatgatgtttctatagttgctgggctagtccctttttccttgagtcctgttttcttttcgtttgtacagttttctgggtttattcttttttattatttatggatgtctgttactactgttccgtaactgcaaaacatgatatcttcaatatggctttaggtcaaaatggctagaaaatatgacagaggaattgatgataatgtgatagcatcttcttatggactgttgctttcatttctttttgcttgaaatatggatcttatgcaaattcacttttgtttctagttccaagccgattatgtctgcgtgtcttatcagccattcctagagaatctcatttctgattgtttgtaatattgaatattttgtgcagaataatctcagggagaagctacgcagattggaatctgagaagagtaatatagaggaagagatcgatcgtcttgagccagtaaaggaggaggtgatatattttacatgttttcgtgtgttgttttgctaggttccactttacttttacatcaatagctattttcatttctttagttggagacccgtattggtaaaaaggaacgggaagtgagagttcttgagaaaaaaataaatgagattgtggaccgtatttacaaagattttagcaagtcagttggggtgaagaacatccgtgaatatgaagagaggcaacttaaagatgctcaagcactacaggagaggaagctaagcctgagtaatcaaatgtcaaaattgaaataccagtaagtaacagttactccctcaggtcatttaaacataatgcaacggtcccactttttgatctgcatgtagttgtttcgtgttgtctgaaacattatatagaatagaaatgactcgcatgcatgaattgaacaatcttaaattttactcacatggatgccttgtagaaaatttggagcataataataataatttatgctgcaggctggaatatgaacaaaaacgagatatgcaggcaccaattattaaattaaaggagacacgtgaatctctagagaaggaacttaagagtttacaggagagagagtctgaagctagggcggaagctgaacaaatttcaaatcagatggaagagctgaaagctgaggctgaaggtatgcatttgaagcttgcttttgttcatttttggttgacaattcaagattatttaaaggagccaactgggtgactctttcctgttcatccatgtcctgttgaacatgattattttgttcccttgatttttttttaatttacccccaagaatttacatttacattctattattcacaccttaacttgaggaaattttctcttgcaactctattccccaatcttccatctaaagagcacttctcttttgcgattcttccgtttgaaccttactaatgtaacctagggctatgagagatgtcatttgcattaagcttttcaaaagaaaaaaaaagcacttaatagtaaatactagacaagatatcagcaactcaatggaattatcttacctaagttttgttagatatgtttggtttgttaactaaatgatgttctcttccgatgctaccagcttttatcgtcataacaaacacaaacttctccaaattctaaatgtttcattgtgtatgttcaccattttagttgtattgaccaatgaaattttcccaatatagactggaaatccaagtctgatgaatgtgaaacgggtattgatgaactgaaggagaagaatggtagtgttgctgcagctttggcaaagctggatcgccaagtgaagtcaaaggtaggtctttctgatactgctagtcctttcataaactagtcttcaatacttttttaacaatgatatgtctgaagcttgttaaaagattacttgtttcattttgtttgtattattatgaaaccatgccatggacttgtaggaagggaagcttgtgcaacttagatcacaggaacgggagattcatgagaagtgtgaactggagcaactgaagcttcctacagttaatgatccaatggatactggatcatcttcacaaataccaatccttgactacagtcagcttagcgaaaactacctacaagatatgcggctttctgaacgtgacaaacttgaggcagagttcaaaaaaaaaataggggatctagttgctcagattgagcacactgctccaaacctgaaagcgctcgaccaatatgaaacattgcaaaggaaggaaaaggatgttatggaaaagtttgaagcagcaagaaaagaagagctggagatagctgacaagtacaattctgtcaagcaacgaaggtattggccaaacattatctgctgtacatatagcagatagcatattctctcaatccatactataattgcaaacatgcatgcaagtcaatacctgttgaagttagtacctcttttttttcctgggatgcttgtagttttgttggaatcatcctgcttattcatatactacgaatgctttctttctgtaagaaatgtttttgattataggtttgctagaagaatgatatacattatattgtttggtcggtggtttatattactttattaccataaaacacatgctgaaattacaatccaatactccagtagacacaaaatagatgtaatctgattacagtgctgttgtttttgaacggaagtatccctttataattccaattacattctgaaccaaacagccttctttggaggcatgttcagtttacaccatacttgtactcaaactcttgttgctcatgatatcagatgatgctgtttggttcttagctgattatgttatacttatgatattggtatttaggtatgagctgttcatggaagcctttgatcacatatcaaaaggcatagaccaaatctataaggagttaacaaaaagtcaaacacatctacttggaggaacagcatatttaaatctagaaaatgaagatgagccatttttacatggaatcaagtacacagctatgcctccgacaaagcgctttagagatatggaacagttatctggtggtgagaagactgtcgctgccctggcattgctttttgccattcacaggtaaatgtttcttgtagtacagtttccttcaacctgtttcgcataattgaaaaggttgtcaggttgttgcattactagtccttttagctctggagtgtcacaaagagaactacttgcaggcactacacattgcacttgaatggtcatgtaggcaccaattttggttataatattgatattgatgtttgtgtttctcgttccacaaacttttatgaacttgttggatctgtcatgaccaaccagtgggtgtcatgcatatttatcagcatagcatacggggagtttcgcaaggcatatcactctctgagaatgctcagatcattttttttgtgtgatgtatcatgttagtatttgtttttttccaaccaagtgtattaagttgtgtggggcattcctcagtttcaggccatccccattcttcatattggatgaagttgatgctgctctggataatttaaatgttgccaaggttgctgggtttatcagatcaaagtcatgccagcgcgttgatgaacaagataatggaggatgtggatttcagagcatcgttatatcgctgaaggacagtttctatgacaaagctgaagcgctggttggtgtttatagggactcagaacgatggtaaagtgcacttctgttacctttgcaaaaacattttagtagtacttatattacacagaccctaactcctctccatcaaataatatatgtacatgcagttgctcgagaaccctaaccttcgacctgacgaagtatagagaagcatga</dnaseqindica> 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