BGIOSGA015838

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Revision as of 04:20, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015838| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015838, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA015838

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015838, complete gene.

LocusTag

OSIGBA0140L04.1

Ensembl Transcript ID

BGIOSGA015838-TA

Ensembl Protein ID

BGIOSGA015838-PA

Length

6140

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:2528640..2534779

Sequence Coding Region

2528640..2529386,2531737..2532176,2534140..2534779

Genome Context

<gbrowseImage1> name=IndicaChromosome04:2528640..2534779 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:2528640..2534779 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCAGCTCCTCCGCCCTGGCTACCTCGGCCTCCTCCTCTTCTTACTCTCCATGCTGCTTGATGCTTCTGATCACCTCATCGCTGGAGCAGCAGCAGCGCCACCTGTGTTCAGCTTCAACTTCTCAGCCGACCACCCATCCACGTACCGCCAAGATCTCGTATTCCAGGACGACGCGATCGAGCCGCAGAAAGCTGGGGCGCCGGTAGAACTCACCTGCACCTGGAACGACCAGGTTTGCAGGCGCGGTGGCCGGTTGTCGTATGCTCATCCGGTGCAGCTTTACCAATTAGCAGCCAACGGCCGCATTAGCAAGGTGGCCAGCTTCTCCACGAGCTTCACCTTCGCCATCAGGCCCATCGAAGGCAGCGGTAAATGCAGAGGTGATGGCATGGCTTTCTTCCTCGCCAGTTTCCCTTCTAAAGTGCCGTACAGGTCGGCCGGGGGCAACCTCGGACTCATCACTGATAAGACGACCACTAGCAATATCGCCCCGGATGATCGGTTCATCGCCGTCGAGTTCGACATCGGCATCGAATTTGACAATGACCCGAAGGAAAAGACCGACCACATCGCCATCGACATCAACTCTGTCAAGGATTCTGCCATTACCACATACTTGCCAAAGAACGTAACCCTTAATGGGACAATGATAGCCGACATCGTCTTCAACAGCAGCACAGGGATGCTGGTCGCCTACCTTCGGTTTCTTGACCATCCATCATCCGCGGCCCACGCTCAGGTGAAAAGGATTCGAAATGTCTTCGACAAGGGAACAGGCGGCGCCAGGTGGTTCGAATACCGCGATTTGGCAGCTGCGACCGACCATTTCTCGGAGGATCGCAAGCTTGGGCAGGGCGCCTTTGGGGCAGTGTACAGCGGACACTTGAAGCTGCTGGACCATCAAGTTGCTGTGAAGAAAATTGTGAGGGAGTCCAGCGAAGGACACAAGGACTTCTTCGCCGAAGTCCGCACTATCAGCGAAGCCAAGCACAAGAATCTCGTCAAGTTTTTTGGTTGGTGCTCCCGGGGACACAGCTGGAACATTCTCCGTTTCATGTGCAGCTGTTTCTGGAGTAAGAAGAACAATGAGCTCTTCCTTGTCTATGAATTGATGACGAACGGCAACCTCAACGACTACTTGTACAAAAGCGAGTCATCAGAAGTACTTTCTTGGCAAACAAGGTACAAAATAGCCAAGGACATTGGATCGGGCCTGCTCTACCTACATCACGAGTGCGACCCACATATCCTGCATAGAGACATCAAACCAGGCAATGTACTCCTGGATGAAAATTTCAACGCCAAGCTCGCCGACTTTGGCCTATCGAGGATGGCAAACCAAGACAATGCGACGTTGCTGACAACTGCCATAGGCTCAGAAGAGTACCTTGATCCACAGTGTCTGAAACATGGTAAGGTCCCATTCAAGCGTAGCTCAGACGTGTACAGCTTCGGCATTGCCCTTCTCGAGATCGCCTGCGCAAGGAGGCACAGGGAGCAAATCTGGGACCTATACCGAAGCGGTGGCAATGTTGTCGAGGCGGCGGATACAAGGTTAACCATGGGTGGTGGCCTTGATATGAGGGAGATAGAGCGTGTCATCGTATTGGGGCTCTGGTGCTCTGCTTTGCAGACTCAACACCGACCTTCTATGCGGCAAGCTATGGATGTCCTGGAGCGTGACGGACCGTTGCCTGACCTTAACAGCTTGATCGTCGTCAACACTACTTTGGCATCAACGACAGAGGAAGACGCCTCCAGTGCGCCGGCGGCGGGCAATCGCTATGACTGTGATGAGGCACCACTGCTGATTCCAGGGTAG</cdnaseq>

Protein Sequence

<aaseq>MSQLLRPGYLGLLLFLLSMLLDASDHLIAGAAAAPPVFSFNFSADHPSTYRQDLVFQDDAIEPQKAGAPVELTCTWNDQVCRRGGRLSYAHPVQLYQLAANGRISKVASFSTSFTFAIRPIEGSGKCRGDGMAFFLASFPSKVPYRSAGGNLGLITDKTTTSNIAPDDRFIAVEFDIGIEFDNDPKEKTDHIAIDINSVKDSAITTYLPKNVTLNGTMIADIVFNSSTGMLVAYLRFLDHPSSAAHAQVKRIRNVFDKGTGGARWFEYRDLAAATDHFSEDRKLGQGAFGAVYSGHLKLLDHQVAVKKIVRESSEGHKDFFAEVRTISEAKHKNLVKFFGWCSRGHSWNILRFMCSCFWSKKNNELFLVYELMTNGNLNDYLYKSESSEVLSWQTRYKIAKDIGSGLLYLHHECDPHILHRDIKPGNVLLDENFNAKLADFGLSRMANQDNATLLTTAIGSEEYLDPQCLKHGKVPFKRSSDVYSFGIALLEIACARRHREQIWDLYRSGGNVVEAADTRLTMGGGLDMREIERVIVLGLWCSALQTQHRPSMRQAMDVLERDGPLPDLNSLIVVNTTLASTTEEDASSAPAAGNRYDCDEAPLLIPG</aaseq>

Gene Sequence

<dnaseqindica>1..747#3098..3537#5501..6140#ATGTCGCAGCTCCTCCGCCCTGGCTACCTCGGCCTCCTCCTCTTCTTACTCTCCATGCTGCTTGATGCTTCTGATCACCTCATCGCTGGAGCAGCAGCAGCGCCACCTGTGTTCAGCTTCAACTTCTCAGCCGACCACCCATCCACGTACCGCCAAGATCTCGTATTCCAGGACGACGCGATCGAGCCGCAGAAAGCTGGGGCGCCGGTAGAACTCACCTGCACCTGGAACGACCAGGTTTGCAGGCGCGGTGGCCGGTTGTCGTATGCTCATCCGGTGCAGCTTTACCAATTAGCAGCCAACGGCCGCATTAGCAAGGTGGCCAGCTTCTCCACGAGCTTCACCTTCGCCATCAGGCCCATCGAAGGCAGCGGTAAATGCAGAGGTGATGGCATGGCTTTCTTCCTCGCCAGTTTCCCTTCTAAAGTGCCGTACAGGTCGGCCGGGGGCAACCTCGGACTCATCACTGATAAGACGACCACTAGCAATATCGCCCCGGATGATCGGTTCATCGCCGTCGAGTTCGACATCGGCATCGAATTTGACAATGACCCGAAGGAAAAGACCGACCACATCGCCATCGACATCAACTCTGTCAAGGATTCTGCCATTACCACATACTTGCCAAAGAACGTAACCCTTAATGGGACAATGATAGCCGACATCGTCTTCAACAGCAGCACAGGGATGCTGGTCGCCTACCTTCGGTTTCTTGACCATCCATCATCCGCGGCCCACGCTCAGGTGGTGAGTGCAAACCTGACAGAACATCTCTAGGGCACACCTCGGCCCGGCCCGCAGGTTGCTGTGGGCTTTTCTGCATCCACCGCCGGATGCGTGGAGATCTGCCAGATACTGTCCTGGTCTTTCAATTCAAGCCTTCCGCTAATACACCAAGGTACGTGATAATACTCCCTCCGTATTTTAATGTATGACGCTGTTGACTTTTCGACCAACGTTTGACCATTCGTTTTATTCAAAATTTTTGTGCAAATATGAAAATATTTATGTCATGCTTAAAGAACATTTGACGACGAATCAAGTTATAATAAAATAAATGATAATTACATAAATTTTTTGAATAAGACGAATAGTCAAACGTTGGATAAAAAACCAATGGCGTCATACATTAAAATATGGAGGTAGTAATATATAGGCTTAATTTCTTGTCGAGAGAATTCCATGGGTAACAAATATTTCACCTCAATCCAAGAACACAAAAAATATGACATGATGACATTAATCTTGGACTAGCCGCAAGCATCCTCGTTTGGTTCTTCATCGTGCTCAGGGTTCATAATTCCGATATTGAATCAAAAACCACTCACGAACGAATTTCACGGAAACCGCTGATAAACCGACGAAATCCTGACTAATATTACGAAAATTGTAAATTCAGCCCCTTTTTTTTTTGACTTGACAACAAATCGATTGTTTTTTGTTTTTTCGTTCTAGTCCAGGTTTCCACCAGGTCTTCTTTTAGAACTACATTTTATTGATCGTAAATAATTAGATACATATCAAGTACAAGTACAGGCAGTTTTGCAATGAGGCTCCTTTAAGATGGCTAAATTTCTTGGAAGGACTTACAAAATAGAAAAAGCAACTAAGCCTATTCTCCACCAGATTACATCCATGCTAGATCCATGGAGACTTCTATGGCGACTATTAAGCAGCTTATAATTTCTGCATGAAGAGATGTCAACCGAGCCCAGCGCCACTGCATGGTTGCCCGGCCATGAGGCCTCGGATAGCTACTGGACTTGTACACAGGGTTTGAAATTTCTGTAATTTCCGAAATTTCGGTAATTTTGCCCCCCCCCCACACAAAAATGCTCACATCTCGCCCGAAACTTTCGGTTTTTTTGCATTTTTTTTGTGAATTTTATCAAATCTTATTCAAATTCATTTAAAACCAGTCAAAATTTCAAAAAATTTTGGACGAAAAAAATCCGAAATTTTCGAAATTTCGGTTCTTGGCAGAAAAGCTGATTTCAAAATTTCAAATCCTGCTTGTACCAGCATGCCGCTATTGTCGTGCGTGTGACCACTATTAAGCAGCATGCCGACCGTGAGCTCCACGCACGCCCAACCACGGAGTCGCCCAGATCAACAGTGAGATGGTGGTTGTATATGGGGGTGCATCGGCCTATCATAGAGAGGCGCGTGCAGTACTGTAGATAAAATGGAATTGTCCTTTTTTTTAATCTCAATGAGTGAATTGAGTTTAGGCTTAAAATGACCATGAATGAATGTTGCCAAATTGTTTTGGAATTTTTTATAATGATGTTGGAACGGTTTTTGATCCCGCGACAGAATATTCACTCGAGGACCAAAATACTTTCTCCATTCTGGGATAAGAAAGACAAATAGGAACATGAGGTAAGGGCAAATGAGGAATTCAGAGAAAAAATACACAGTTTTGTGGTATTGATGAGAAGTCCTAGTTCTTTTTGGGGAAACAATTAATTGGTACTCTAAGTTATTGGTGGTTTTAGTTGATTTAGATGGGATCCTTGTGCTATATAGCTAGAATTTTTTTCTCCTTTTTTTTCAATGTGCATTTTCTTATCTCTTACTCTTTTTCTGCTTCCCCTTTATTTCCTATTTTTGAATTAATGTTTATTTCTTATCCACATTTTTGTTCAATGAAAATTTTGAAAATTGCACTAGTTTTTTCTCATCCATTCGATCAAAATCAAATAACTCTAATCATATCCTACATTCTCTTCATAAACAAACTCTATTCTTCTTAGGTTAAAGTTGAGCATAAATTATTCTAACTTAAGCATGAAATAAATTTACAATTGATAAACAGTTAGATGATGATGTAGTTGTAATCAAGCTTATAATAAAACAAAATAAAATCATAGACAATAACAGAATTGCAGATCAAATGAAAACTGAAATTGCACATAAACATAGCACTGAAATTTTGGACTTACCAATATGTTTAGCTTGATTGAAATTTATATACTGCTATTGATTTGCATGTGCAGATACACACAATATAGCACGGTTGCTGGTTGAACTGATCATTGGAGGAGCTCTAGTGTTTGCGCTAGTTTTGTGGTTCTTACTCTCTTGTTGGGAGCAGAAAAGGATTCGAAATGTCTTCGACAAGGGAACAGGCGGCGCCAGGTGGTTCGAATACCGCGATTTGGCAGCTGCGACCGACCATTTCTCGGAGGATCGCAAGCTTGGGCAGGGCGCCTTTGGGGCAGTGTACAGCGGACACTTGAAGCTGCTGGACCATCAAGTTGCTGTGAAGAAAATTGTGAGGGAGTCCAGCGAAGGACACAAGGACTTCTTCGCCGAAGTCCGCACTATCAGCGAAGCCAAGCACAAGAATCTCGTCAAGTTTTTTGGTTGGTGCTCCCGGGGACACAGCTGGAACATTCTCCGTTTCATGTGCAGCTGTTTCTGGAGTAAGAAGAACAATGAGCTCTTCCTTGTCTATGAATTGATGACGAACGGCAACCTCAACGACTACTTGTACAAAAGCGAGTCATCAGAAGTACTTTCTTGGCAAACAAGGTGACATCGGCGCATTTTAGAAAATATACTATATTCATCCTAACATATATTCTGTTGTTTTCATCTTTTCAAATCGTCTTTGCTTTAAGTTCCCTTTTTAAACTATTATTTTTCACATTTGAAATTAACACTACTATAGAAACAATTTTTCCACGCGTGCCGAACACATTTTTTTACGTGGGCAAAGCAACTGCTTGTGTTAGCAGAAAAGGTTTTCTTTTTTACACAACCGTGTGCGAAAAAGGGATTTTCGCACGCGAGTACATTATGCTGCCCGTCTGCAAAACTTAAATTGGCAAAATAAATTTCAAAAAAAAAAATAATGCACAAACCCTAGCTCCCATTTCCAACAAACCCTATATCCCATCTCTAGTAATAAGAAAAATACAACACTGCCCCAAAGATGCCATCATTGGTGCCACGCGGATCAACCCGTCCAAGTGCTGGAGCCATGGGATCCAGCCATCGCGAGGCCGCCTGTATGGGATCTTTGGGGCACCCTATCGTTCCCGCCGCTCCATCGGCAGTGGTGGATCCAGCTTTGAAGGACCGCCCCTCCATCCCACAACCCTCCGCCGTCATCCTGGTCGCCCAACGCCCCATTGCCCCCACCTCTATGCTGTCGGCGTCGGATCTGGCTGCGGTGGACTGCACCACCCCACCGCCCCTGAGCCCTCCATCATCCTCGTGGTTGCCCTCCGCCCTTGCCACCCCAACCCTTCGCTGTCAGCGATGGATCTACCCTGACAGGGCCGGAGGTGACGGATCCGCTTGACAAGCTGTTGACCCTCGCCGGCCAGTTGCTCCCATCGCGGCACACCCCACGCCGACCCAGTTCTCCTATCACGGCACGCCTGCACCCACCGGTGCTTCAATCTTGGCGTTGCCCTGCATCCGCCTACTACTCGCCTCGCTTTGGCCATTAGGAGGGATAGATGGAGGAGAGGAGAGGGGCTGAGAGAGGAGGCGGAGGTGGAGGGAGTAGGACGAGAAGCCGAGGGAGAAAGGGAGTGAGTGAGGAGGACCTAAAAAAGAAAAAAAAGGCAAAGGACGTGTGCTCTGAAATGGTTTTCACCTACGGATCTCTTACTAGACCTGACTAGAGACCTGTATGTGAAAAATAGGTTCATTTTCACTGATGAATTGTTACTAGACACCATCCAAATCTTATTACAAACAAAAGTTCTATTAGCCTACCTGCAATCAATTAGAGGTGTTCGTAAAAATCGTTTTTCTAGTGTAATAAGTATAGGAATAAGTTCACTTAGGTCCCTTATATCTTATTACCAGCCACCTAAGATTGGTGTTCTTTTCCTCAAATACATACTGCACCTTACATTCTGTTAGCACGTTTGTCATATTACTAAACGTGTTTCGTGTGAAAATATTATATATGTATAGAAATTGTTTTAAAATGTAAGATAAATATATTTTTCAATTTTATAGAAATTAAAATTTAATTAATCACGTGCTAATGACTTTTTTCTTTTCGTGCCCTCTTCTTTATTAAAGAGGAACACTTCTTAATGCATGCAAGATTTTAGGAACCACTCATATTTAAGTATGCCTCATAATATAATAATTTTTAAAGTTCTAAATTAATATGTATGGAGTTGTACTCAGTTTGTTCGTTTATCAATTATCTTGTGTGTTTTTGCTAACATTACAATGTCTAGGTAAATCATATGCAAAACTTTTTAGGTAATCATATCTTTTTCTTTTTTTTTCCAAATAGGATACACACCGATTTGTCAAAGTTAAATAATGCAGCTTCCACTCAACAAATTTATTAACAAATCATAAATTACAATCCTACCATGGCTTGTCTTAAAAAATCGACAAATACAACATTATAATCCACTACAATATGTTGCTTCGAAAGTATGGTTTCTGTTGGCATTAAATTAACTAACTAAGAATGTTTATGGCCAATCTATTGAGCTATCTAACTATGATCAAACAGGTACAAAATAGCCAAGGACATTGGATCGGGCCTGCTCTACCTACATCACGAGTGCGACCCACATATCCTGCATAGAGACATCAAACCAGGCAATGTACTCCTGGATGAAAATTTCAACGCCAAGCTCGCCGACTTTGGCCTATCGAGGATGGCAAACCAAGACAATGCGACGTTGCTGACAACTGCCATAGGCTCAGAAGAGTACCTTGATCCACAGTGTCTGAAACATGGTAAGGTCCCATTCAAGCGTAGCTCAGACGTGTACAGCTTCGGCATTGCCCTTCTCGAGATCGCCTGCGCAAGGAGGCACAGGGAGCAAATCTGGGACCTATACCGAAGCGGTGGCAATGTTGTCGAGGCGGCGGATACAAGGTTAACCATGGGTGGTGGCCTTGATATGAGGGAGATAGAGCGTGTCATCGTATTGGGGCTCTGGTGCTCTGCTTTGCAGACTCAACACCGACCTTCTATGCGGCAAGCTATGGATGTCCTGGAGCGTGACGGACCGTTGCCTGACCTTAACAGCTTGATCGTCGTCAACACTACTTTGGCATCAACGACAGAGGAAGACGCCTCCAGTGCGCCGGCGGCGGGCAATCGCTATGACTGTGATGAGGCACCACTGCTGATTCCAGGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015838