BGIOSGA015889

From RiceWiki
Revision as of 04:21, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015889| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015889, complete gene.| tag = OsI_148...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015889

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015889, complete gene.

LocusTag

OsI_14833

Ensembl Transcript ID

BGIOSGA015889-TA

Ensembl Protein ID

BGIOSGA015889-PA

Length

2429

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:3892736..3895164

Sequence Coding Region

3892736..3893011,3893093..3893242,3893306..3893370,3893495..3893564,3894094..3894312
,3894497..3894640,3894715..3894850,3894935..3895164

Genome Context

<gbrowseImage1> name=IndicaChromosome04:3892736..3895164 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:3892736..3895164 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGAGCTCGCACCAGCCTCTCTGCACGAGGGCCCACCAAGCGGCCGCCCTCCTCCTCGTCGCCGCCACCTTCTTCCTCACCCGCCTGCTCGACCGGTCCCCACTCTCCGCTCCGCCGCCCCCCTGCGCCGCACCATACAGTCCCTGGCCGCACCGCGACCTCCGCATCTACGTCTACGCCGAGGACGAGGTCGACGGCCTGCGCGCGCTGCTCCGCGGCCGCAACGACGACGTCACCGCTGCAACCTGCATCAAGGGCCAGTGGGGAACTCAGGTGAAGATCCACCAGCTCCTCCTCAGCTCGAGATTTCGAACATTTGACAAGGACGAAGCGGATCTCTTCTTCGTTCCCACCTATGTCAAATGCGTTCGGATGACGGGAAAACTTAACGACAAGGAGATCAACCAGACATACGTCAAGGTGGTTCTCAGTCAGATGCCTTATTTCCGCAGATCCGGAGGACGCGACCACATTTTTGTCTTCCCAAGTGGTGCTGGAGCTCACCTGTTTCGCTCATGGGCAACCTTCCTGAATAGGTCTATCATCCTTACTCCTGAGGGTGACCGCACTGATAAACGAGGTATAAGCGCTTTTAACACATGGAAAGATATTATTATACCTGGGAATGTGGATGATTCTATGGTGAAGTCTGACAGGCTTGCTGTCAAACCGATCCCATTAACAAAAAGGAAGTATTTAGCAAACTTCCTTGGGCGTGCTCAGGGAAAAGTAGGCCGTCTCCAACTGGTGAAGCTTGCAAAGCAGTATCCTGACAAGCTGGAGTCTCCGGAGCTGAAGCTCTCTGGACCAGACAAATTGGGAAGGATAGATTACTTCAAGCACTTGAGGAATGCAAAATTTTGCCTAGCTCCTCGTGGCGAGTCTTCATGGACACTTCGCTTCTATGAATCCTTCTTTGTGGAATGCGTGCCGGTAATTTTATCAGATGAAGTTGAGCTTCCTTTCCAGAATGTGATTGACTACACTGAAGTATCGATAAAATGGCCTGCGTCCAAGATTGGCCCGGGGCTCCTTGAATATCTCGAGTCAATACCAGATGGAAGGGTTGAGGAAATGATTGGTCGCGGGCGGGAGATAAGATGCCTATGGGTGTATGCGGCGGATACAGAGCGGTGCTCGGCTATGAGCGCTATCATGTGGGAACTGCAGAGGAAGGTGAGGCGATTCCATCAATCCGCAGAAACCTTCTGGCTTCATAACAGGTCAATCGTGAACAGAGACCTGGTTGAGTTCCACGAGTGGAGGACGCCTGTCCCACTGCCATGA</cdnaseq>

Protein Sequence

<aaseq>MRSSHQPLCTRAHQAAALLLVAATFFLTRLLDRSPLSAPPPPCAAPYSPWPHRDLRIYVYAEDEVDGLRALLRGRNDDVTAATCIKGQWGTQVKIHQLLLSSRFRTFDKDEADLFFVPTYVKCVRMTGKLNDKEINQTYVKVVLSQMPYFRRSGGRDHIFVFPSGAGAHLFRSWATFLNRSIILTPEGDRTDKRGISAFNTWKDIIIPGNVDDSMVKSDRLAVKPIPLTKRKYLANFLGRAQGKVGRLQLVKLAKQYPDKLESPELKLSGPDKLGRIDYFKHLRNAKFCLAPRGESSWTLRFYESFFVECVPVILSDEVELPFQNVIDYTEVSIKWPASKIGPGLLEYLESIPDGRVEEMIGRGREIRCLWVYAADTERCSAMSAIMWELQRKVRRFHQSAETFWLHNRSIVNRDLVEFHEWRTPVPLP</aaseq>

Gene Sequence

<dnaseqindica>1..276#358..507#571..635#760..829#1359..1577#1762..1905#1980..2115#2200..2429#ATGCGGAGCTCGCACCAGCCTCTCTGCACGAGGGCCCACCAAGCGGCCGCCCTCCTCCTCGTCGCCGCCACCTTCTTCCTCACCCGCCTGCTCGACCGGTCCCCACTCTCCGCTCCGCCGCCCCCCTGCGCCGCACCATACAGTCCCTGGCCGCACCGCGACCTCCGCATCTACGTCTACGCCGAGGACGAGGTCGACGGCCTGCGCGCGCTGCTCCGCGGCCGCAACGACGACGTCACCGCTGCAACCTGCATCAAGGGCCAGTGGGGAACTCAGGTAGGTGTAGCAGCTACTAGTAGTTCTAGCCCTAACCAATTGCTCGAGCTACTGTACAAACCGCGTTTCGATGTCGTGCAGGTGAAGATCCACCAGCTCCTCCTCAGCTCGAGATTTCGAACATTTGACAAGGACGAAGCGGATCTCTTCTTCGTTCCCACCTATGTCAAATGCGTTCGGATGACGGGAAAACTTAACGACAAGGAGATCAACCAGACATACGTCAAGGTGGTAAAACCTTACCTTCACCTCACGCGCCTTCATTTCTTACCCATCTCCCCTCTCTGCTTGCAGGTTCTCAGTCAGATGCCTTATTTCCGCAGATCCGGAGGACGCGACCACATTTTTGTCTTCCCAAGGTTCCACCTCTTCTTCTTCTTCTTCTTATTTGACTTCCTGTTAGTATGTTTACCCAAACAATAGCCACTAAAATCCTTCCAATTACCTAAAACCGGCACCGCCCTTGTTTTCTTGCTTGTGTAGTGGTGCTGGAGCTCACCTGTTTCGCTCATGGGCAACCTTCCTGAATAGGTCTATCATCCTTACTCCTGAGGTACACAGCCATTTTTGCATTCATCTTCTTATTTGCTTCGCATTTCTTAAGACAGAGTAAAGTAATGCTCCATATATCCCCAAGCATAACTTACACAAGTTTTATTGGGTTTGCCTTCTGTATAATTGTTAATTGTTATATCTACGAAAAACATGCCCTTATTCAGAACTGTTACAACGATTGCTGCAATTTTGTTAAATCCCCATTAAATATTACCGCGCTTCAAATCCTTAACTGCGGGAGGATCAAGGCCCGTAATGCATCCTTAGTCCATCCCATCCAAATGTGCAGCGTATATGAGTCAGCTTGCTATAATATAATACGGCAGTGTTTTTCACAAATCCTAGCGTAGATGATAGCAGTTGCATGCCTTGGTCTAATTAAATTCTGTATCTTCAGATGTCCTCAATTTGTTTGCGAGTAATAAGTGGGTTCATGAGTGGTCTTCTAGTCTTCTGTTAACTCGACATGCAAGCAACTTCTGACATCTTCTTAACGAATGGTTCTATGTTCAATTTTTTTTTGTTAGGGTGACCGCACTGATAAACGAGGTATAAGCGCTTTTAACACATGGAAAGATATTATTATACCTGGGAATGTGGATGATTCTATGGTGAAGTCTGACAGGCTTGCTGTCAAACCGATCCCATTAACAAAAAGGAAGTATTTAGCAAACTTCCTTGGGCGTGCTCAGGGAAAAGTAGGCCGTCTCCAACTGGTGAAGCTTGCAAAGCAGTATCCTGACAAGGTTCGGCTTCCTTCTAATCTCCAAATGCAACTTAACATTTTATGATGGTGTAAGCCTTCCTCTGAATATGATCAGAAGTAGTTATGGCAGAAACTTTTTAATGGTGTAATTAACTTTAAGTGAATCAAGTGATGATAAAAAAAAGTTCATTTCTGATGTGTATTTGGGTTGTTCTTATGAACAGCTGGAGTCTCCGGAGCTGAAGCTCTCTGGACCAGACAAATTGGGAAGGATAGATTACTTCAAGCACTTGAGGAATGCAAAATTTTGCCTAGCTCCTCGTGGCGAGTCTTCATGGACACTTCGCTTCTATGAATCCTTCTTTGTGGTGAGCTCTTCCTCAAAAGGATGATAGTTAGTTTCAGTGCATACCTACAGTGCTCCTTACATTGTTGACTACAGGAATGCGTGCCGGTAATTTTATCAGATGAAGTTGAGCTTCCTTTCCAGAATGTGATTGACTACACTGAAGTATCGATAAAATGGCCTGCGTCCAAGATTGGCCCGGGGCTCCTTGAATATCTCGAGTCAATACCAGGTAGCCTCCTTTCCATTTTGTAATCTGTAGAAGAGTCAAGCCATGTAAGCAGTTAGCATGAGCGGGGTAAGCGGATGCATGCAGATGGAAGGGTTGAGGAAATGATTGGTCGCGGGCGGGAGATAAGATGCCTATGGGTGTATGCGGCGGATACAGAGCGGTGCTCGGCTATGAGCGCTATCATGTGGGAACTGCAGAGGAAGGTGAGGCGATTCCATCAATCCGCAGAAACCTTCTGGCTTCATAACAGGTCAATCGTGAACAGAGACCTGGTTGAGTTCCACGAGTGGAGGACGCCTGTCCCACTGCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015889