BGIOSGA015896

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Revision as of 04:21, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015896| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015896, complete gene.| tag = OsI_148...")
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Gene Name

BGIOSGA015896

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015896, complete gene.

LocusTag

OsI_14850

Ensembl Transcript ID

BGIOSGA015896-TA

Ensembl Protein ID

BGIOSGA015896-PA

Length

7006

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:4089448..4096453

Sequence Coding Region

4089448..4089714,4090579..4090658,4090865..4091195,4094648..4096453

Genome Context

<gbrowseImage1> name=IndicaChromosome04:4089448..4096453 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:4089448..4096453 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCGGCCCAAGGCACCAATCTCGTGAAGGAGTTTGTGAAGGAACTCAACAAGCATAAATACCTTATCGTCCTAGAAGACCTGTCCAACATGGCAGAGTGGCACGCCGTCCGGACATATCTACCAGACGGTAAGCATGGGAGCCGTATAGTCGTGTCTACACAGCAACTCGAGATTGCCAGATTGTGCGCGGGGCAACACTACCAAGTATTGGAGCTCAAGAAATTATCAGACAATGACTCCATCTGTGTCTTTTTCCACGAGGCTTTTGAACGTGTCGAAGTTGGCATGGTGGCTGGTGGACCTTCCTTATTGGAAATGTCCAACGAAGTTCACCTTTGTGGCGACTTCTGTCGAAGAATGCACTCGTATATGTTCGAACAATCACAAGGAGAGTATGCGTACATGCCCATGAATCCAAAACCAGAGGAAAATATCATCCAAGAGTGTAGAGAGTTTCTGCAGAATTCTCGATGCCTTATAGTGATCGATGGCCTGCGGTCCAGGGAACAGTGGGACTCGATAAAGTCGTTGATTGATGGATCCTCTAAGTGTTGCATCCTTGTCGTTACTGCAGAAGAAAACGTCGCCAAATATTGTGCCGTGCAAGACGATGCCGCAGTACACAGAGTCAACGCTCTAGGATCTGAGGCAGCCCTCGAGATTTTCAAACAGGAATTTCGAGGGGCCGGAACATTAAGGGATGCACACACGCTGGAGGAAGCAAAATATATCTTAGCCAAGTGCGGTGGAATTCCAGAAGTAATAATGGCTTTAGCTAGATATGTGGCCTCCGAGCAAGAGGACATACGGCAAAGGAAGTTGAGCCATCTTAAAGACAACTTTATGCACGAGCTGGAGACCAACCCCGAGTTTGTTAGCTTGCGGGATCTGTTCAGCTGGATGCATTTTAGTTTTGAGGCTTTACCGCACTCCATCAAGCCATGCATCCTGTATCTGGCAGTGTTCCAAGTGAAGAGAATCCGGCGGAGCCATTTTGTGCGGCGGTGGATCGCGGAGGGCTACTCCAAGTGCACTGACAGCAAAACCATGGAGGATTACACGGGCGAGCTCTTCGACAGGCTTGCCAAGGAGACAGATACAATGCCCGAGTGGCGGTTCAATAGCTTCTTCCATGAGTACATCAACTCACGACTCATGGAAGAGAGAGTGGTTTTCTTTCCATTGGTAGTCTCTGTGTTGGATGGGAGTCGCAGCCTAACCACGGAAGTCATGGGACAACACCTAGTCATTGGGAGCAGCTGGAAAAGAGACGAGGAGTATGTGTACTACGAGGACCTGGACGTGTCGCATCTCCAGTCTTTGACAGTATACGGAGCTTGGAAGTCCCTCTTCGTCCCTTACAAGATGAAATCGGTCCGGGTGCTGGATCTAGAGGGCACTACTCATGTTGGTTTTGGTGACGATGAACTCAAGCGGATCTTGGAGCTGCTTCCTCGCCTCAGGTTTCTCTCACTGAGAGGGCACCGAGAAATCACTCATCTCCCGGATTCCTTGTCTGGCCTCAAGTATCTCCAGACTCTGGATATCAGGCACACCTCAGTTGTCTACATTGCGCTGCAGACGCTACATGAGCTGCAGTACATTCGTGCAGGCACCACGGCGCCATGGATGGATGGTGGTAAAGGCTTGGCTTACGAGGCATCGAGTATCAGCTCATGCGCTAGTGTGGCGTCGTCCTACTTGCCCAAGTTCCTGAGACGTGGTGGACCTGTTGGACCTTGTCAAGGCGTCAAGATGCCTAGAGACGGGATCCATCACCTGAAGGCCCTGCACACGCTTGGTGCCGTCCACATCAATTCTTCAAGCGGACAGGCCATTCTGGCTGACATCTACCGTCTTAAACAGATGAGGAAGCTCGAAGTGTCAGGCATCAACCGGAAAAACAGCAAACATCTGTTCCATGCCATCATCAATCACAAGAACTTGGAATCCTTGTCACTGCAGCTGGACAAGGAGAAACATGTTGTTTGTTGGGATGACATCTCCCCTCCTTCCAGCGTGCGGAGCCTTAAGCTGTATGGGCATGTGGAGATGTTATCGGCTCGGAGGTTCAAAAATCTTAGGAACCTAAGGAAGTTGTGCCTAGAGATGAATACTACACTATTCACACAGAACGTACTGCTCCTCGGGAGCGTATCAAGTCTGCGAACTCTACGCCTTCATGTCAAGCAGAATCAAGATGGTGTCCTCCAATTTCGGGCTCATCTTTTCAGCAAACTTCAGCACCTTGAGATTGTTTGCAGGTCCAACTTACATGTAATATTTGACGAAGAAGCAATGCAGAAGCTAGAGCTGCTGAAGATCCACTGCCATGATGGGTCGTTACTGCAGCTTTCTGGGCTAAAGCATCCAGTTTCCCTCAACCAAGTGCGGGTTCTGGGTACCTTTGACGACGCACTCATGGAGTCTTGGCGGCAGCAACTGGCGGAGCATCTGAGAAACCCTGCTTTAGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MDAAQGTNLVKEFVKELNKHKYLIVLEDLSNMAEWHAVRTYLPDGKHGSRIVVSTQQLEIARLCAGQHYQVLELKKLSDNDSICVFFHEAFERVEVGMVAGGPSLLEMSNEVHLCGDFCRRMHSYMFEQSQGEYAYMPMNPKPEENIIQECREFLQNSRCLIVIDGLRSREQWDSIKSLIDGSSKCCILVVTAEENVAKYCAVQDDAAVHRVNALGSEAALEIFKQEFRGAGTLRDAHTLEEAKYILAKCGGIPEVIMALARYVASEQEDIRQRKLSHLKDNFMHELETNPEFVSLRDLFSWMHFSFEALPHSIKPCILYLAVFQVKRIRRSHFVRRWIAEGYSKCTDSKTMEDYTGELFDRLAKETDTMPEWRFNSFFHEYINSRLMEERVVFFPLVVSVLDGSRSLTTEVMGQHLVIGSSWKRDEEYVYYEDLDVSHLQSLTVYGAWKSLFVPYKMKSVRVLDLEGTTHVGFGDDELKRILELLPRLRFLSLRGHREITHLPDSLSGLKYLQTLDIRHTSVVYIALQTLHELQYIRAGTTAPWMDGGKGLAYEASSISSCASVASSYLPKFLRRGGPVGPCQGVKMPRDGIHHLKALHTLGAVHINSSSGQAILADIYRLKQMRKLEVSGINRKNSKHLFHAIINHKNLESLSLQLDKEKHVVCWDDISPPSSVRSLKLYGHVEMLSARRFKNLRNLRKLCLEMNTTLFTQNVLLLGSVSSLRTLRLHVKQNQDGVLQFRAHLFSKLQHLEIVCRSNLHVIFDEEAMQKLELLKIHCHDGSLLQLSGLKHPVSLNQVRVLGTFDDALMESWRQQLAEHLRNPALV</aaseq>

Gene Sequence

<dnaseqindica>1..267#1132..1211#1418..1748#5201..7006#ATGGACGCGGCCCAAGGCACCAATCTCGTGAAGGAGTTTGTGAAGGAACTCAACAAGCATAAATACCTTATCGTCCTAGAAGACCTGTCCAACATGGCAGAGTGGCACGCCGTCCGGACATATCTACCAGACGGTAAGCATGGGAGCCGTATAGTCGTGTCTACACAGCAACTCGAGATTGCCAGATTGTGCGCGGGGCAACACTACCAAGTATTGGAGCTCAAGAAATTATCAGACAATGACTCCATCTGTGTCTTTTTCCACGAGGTACAATGCAACGGCCTTTTTCTACACATATCTAAACTCTAGAGTAAGATTCCCAGTTGTAGATGGAGCGTTACTCCGGTGCTCTCTACTAGTAGTATTATATATACTAGCAGTATTATTAGGGTAAATTAGTAATTTACAAATAATACGATTAGGAGTAACTGTTACTTATGTTTTTTTGGCTAAATCTATCTATGATTATCCATTGCGCTAGCATTGCTCATATTCCATGGGAAAAATCCAAAATAGAAGAAAAAAGGTTTAGTTAATGCTAAATGATGATTATACCGCTCCGTACCTTTTTTTTTCAATAATACCCCTTCAACATTTCTACTACCGTTAACTTGGGTGTTAATATAAATAAATTTAAACCCTTTGATCAAATTAAATCAACAGTTCAAATTACTTTCTACTACTAGTAGAGAACACCGTAGTGGAAGATGGATCTTTGCTACAATTTGTAGAAGTTGAATTTAACCTACACGTTCGTGGAGTGATATATTACATATTGATCTATCTTGCCAATTCTTTTCATAACCATTTAGTTAATATGGAATAAACAGGTGGATATTCATCCGAGTGATTAAAAGAGTTTCCGCACCATAGTGGGGCTCAAAACATTATACAAATTTTAATTCCTAAATGTCAGAAGGCCAATTCGTTATGCATGTTCCATATATTTGGATATATCGTACTAATAATTCAATGTTTGTTGTGCTGAATTTTAGTGTAGAATCATTGTACCGTAAGGAATTCCGTGTTGAAATAACCAAGCAAGTGTGAGCCGTAAATTCGAGCATGATTGGTTATTCTCTCATGGATCAAGCATGCAATTGATCATTCTCTATCCTTATTAATTTGTAGGCTTTTGAACGTGTCGAAGTTGGCATGGTGGCTGGTGGACCTTCCTTATTGGAAATGTCCAACGAAGTTCACCTTTGTGGGTGCAGCTCGGATGAGAGAGAAACTCTCTAACCTGATTTCTTCAGCACGCCATAGCGACAGATCTCATGTGATCTCTGTATGGGGTTTTCCTGGTCTTGGGAAATCGGCTCTAGTAAGAACCGTCAGGCGACGCCAAGCGAGTAAATCCGACATCCCCATTTGATTGGTATGGCTGGGTCGATGTGTCCTATCCATTCAATTTTAGCGACTTCTGTCGAAGAATGCACTCGTATATGTTCGAACAATCACAAGGAGAGTATGCGTACATGCCCATGAATCCAAAACCAGAGGAAAATATCATCCAAGAGTGTAGAGAGTTTCTGCAGAATTCTCGATGCCTTATAGTGATCGATGGCCTGCGGTCCAGGGAACAGTGGGACTCGATAAAGTCGTTGATTGATGGATCCTCTAAGTGTTGCATCCTTGTCGTTACTGCAGAAGAAAACGTCGCCAAATATTGTGCCGTGCAAGACGATGCCGCAGTACACAGAGTCAACGCTCTAGGATCTGAGGCAGCCCTCGAGATTTTCAAACAGGTGTGTGACCCCCTACTCATTAATTACTCCTTTTACACTGTGGCATGTTTAGATCCCATCTTAAAATTTTTCGCGATGTCACATCGAACATTTAAACACCTACATAAATTATTAAATATAGACTAAAAAATAACTAATTACACAGATTGCGACTAATTTGCGAGACGAATCTTTTAAGACTAATTGCTCTACGATTTGATAATGTGGTGCTATAGTAAACATTCACTAATGACAAATTAATTAGGCTTAATAAATTCGTCTCGCGGTTTACTGACAGATTCTGTAATTAGTTTTTTTTATACACCCTAAGTGACACCCTATATAATTCTCCCGGTGAGGCACGCCAAATATTTGTCCATAGCACACAATACGTGCTGACAAAGAAAGTTCTCCCTCCATATTGCATAATTTAATATTATAATTGTTTTGATTTTTTTAGTTAATTTTATTTTAAGTTTGATCAAGTTTGCAGAAAAATATAGTAATATCACAAAACAAACATATTATCAAAATATATTTAATGTTAAATTTAATGAAACTAATTTCGTTTATAGATATTACTAATTTTTCTATAAACTTGATCAAACCAGAAAACGTTTGACTAAGAAAAAAGAGAAACGACTTATCGTTTGAAACACATAGAGTACTATACTACTAAAAGTAATGTCTATTAATAACTTAATAAAGTAACAGAAAATGAACCACCATGTTCGCTCTCACGACCTAAAAATTTCTCGCATTAATAAAAAACATTTGAAGTAGACATATAATTTAAATACCTGAAATTCAGAGAAAAATAAAAAAATAAAATGAAGTCCATATAGAAATACAACTTAGAAAACAATAATTTAACTTCACTTTAAAAAAATCAACATTGAGATAAAAGTTCATGTAGAAATGCAATAGAAAATATATAATTCAAATTAACAATAAATAGTATTAATATTAAGAGAAAGGGTTCATGTAGAAATACTATTTAGAAATACTTAAAATTCATATAGAAGAGTAAATATAATGGAGAAAAGATTTCATGTAAGAGTACAATTTAGAAATATTTTAAATTCAGATTAAAATAAATAATAGGAAGAGGAAGAGTTTATCGACTAGCTATACCCCCATCAGACTGTTGGGGTGGCCCGGCACAGCACGAACTTCAGGGACGTGAAATAGACTTATTTTCAACCATATGTAAGTCAGGGCAAAAAAATAGGGAGGACAAATAGACGTATTATATGGCATGGTCCAAAGAATAGGGACGTAAATAGACTTATTTTAGCTTTATATATGTCACAACACAAAAAAAGAGGGAGGGGGAATAGACTTATTTCTATGAAAGCACGATGGGCTGCCTGTGCCTTCGGGCTGGCCTAGCATGGCCTGACCCTTATTAGGCCGTGCCTGGGCCACAGGTGGAGCACGTGGGCCGGCACGACATGGCCCGGCACGGCCCGACATGTCTTGGCCCAGGCATGACCGGGCCTGGGCCGTGCCGTGCAGGGCAGCCCATATGGCCAACTATATACCCATCTACCGTCAATATATGGTATGACTTGGCATGACATTACTGAATGACCATATGGAAATATTCTAAAGAACCATTGACATCCCCAATCTTGAGTGTTTGTGTTATCTGTTGGGACTGTCTACACATTTGTCGTCAAATGTACTTTTAAAAATTCTAACAAATATAATTATAATACAAACGTGATGTAATTACATCGTAACTTGTATATAACTTTTATACATCCCTTCATAACATGTCTTTTTCATAAAACGTATATCATGGAACCGAATCCCCCACATGTATGTGTGTTGTGAGATTTTTTTCCTTCCTCGCTATCTCACTTACACGATTCTTTAAACAAATCTAATTGTTCAAAACTATGTAAAAGTTATATTCAAGATACATTGTAGTTACACTACGATTGTGTTGACGGAAAACACGACAGCCTAAGAGATTTGCTAACTCCAGTGCAAGTCCAAGGCTTGCCTCAAGTGTCAAAAGTGTGCCAGCTGGTTTGATCTTGCAATCAACAAGAAAGAGAAAACATAATTAGATTAACGATAGCCGATAGGGCCAATATGGGTAAACCTAATCGGCTGCGGCTTTATGATAGTCAATCCAAAGCAAAACCCTAAACATGCCCTATCAGCTATAATACTATCTCTTAGGTTTGCATCAATCATTTTAGGACAGTATTAAAGAAATAGCCGATAGATCAGTATTTAGAGCAAATATAGATAATGTATTAGCTAATACTCCAATACAAACTTATCCTAATAAACTAATCTATATAAACATATCAAAAAGCAATCGATCACTAGATATGAAGCTTAAGAGAGATCAATCTAGCTTGATGTATTTATATAAAGCAACCTATTTATATAAGTGGCAAATATACATAAACATATCATGAAACATGCGCTATCATGTATATTAGATAAGATCGGCTGAAACACTAATACTGCACTTAATTATGATTAATTTCAGGTTAGTTTTTATGATTCTAAAAACGGCTAGAGAGGATGCATCACAAAGTATGCAAAGAAACATAAAGTCTAAATAATTAAGGAATTAACCACTTTTAAGAATGGTAGATACCTTAGCTCTAATATAGTAAAACAATTTAGCTGATACCGGCATAAACCCTAAAGCGGAAATCGATGGATAAGACTAAATTGAGATGCTGAGACTGGATTAACTAAGATACGTAATAGCAATGGCCACGGTAAAAGGACTAATAAATCTAAATCGACATAATAGCCCCGATAGCGCAAGACATCGAGACAAATTACCTCTTGTCGAGAGATCGCAGCCGATGCCCCGGCATTAAGCAAGAACTCAACAAAAAGTAAAAGAAAAGGGTGGCAACATGCCGAAAGTTGTATTGATTTGATTGTCTCCTGCATGACAATGGTCAGGGGTTTATATTTATATCCCGAGTACAAAACTTGCCGATTATAGACACGACTCAAAACTTTCCTAAAGATAAAATACAAACAAGTCCACATGGCGGACTCTTACCACATCTCTAACTCAAACCGACATAAATATCCTAATTAATAGATACAATTGCCTTAAACGAGCTTTTTCTCTAAATGGCAATAACGGTTAATCTCAATCGTAGCCCAAACCGAGCCTAAGTCAAGCCGTATCGGCTACTTGCCATATCGGCCCAATTAGATTCCGACTCTGTTTTCAGCCGATATACTGCTAGCCGATGCGCAATCTGTTTTGGCAAGATTTAATCTCCTTTGATTCCGCTTCGATATCCAACTCCAAATCCGAGTCTATTTTGCCAAATTTCGATGTTAACAGATTGTACTATATTTATACCTGTTAAATTTTTAGAAAAAAATTTATCGACAAATATATAGCAAAATTTTTATACGTTTCTTACTTTAACATCACAAAAATATCTTCTGATAGCTTTTAAATTATTGTAAAACAGGAATTTCGAGGGGCCGGAACATTAAGGGATGCACACACGCTGGAGGAAGCAAAATATATCTTAGCCAAGTGCGGTGGAATTCCAGAAGTAATAATGGCTTTAGCTAGATATGTGGCCTCCGAGCAAGAGGACATACGGCAAAGGAAGTTGAGCCATCTTAAAGACAACTTTATGCACGAGCTGGAGACCAACCCCGAGTTTGTTAGCTTGCGGGATCTGTTCAGCTGGATGCATTTTAGTTTTGAGGCTTTACCGCACTCCATCAAGCCATGCATCCTGTATCTGGCAGTGTTCCAAGTGAAGAGAATCCGGCGGAGCCATTTTGTGCGGCGGTGGATCGCGGAGGGCTACTCCAAGTGCACTGACAGCAAAACCATGGAGGATTACACGGGCGAGCTCTTCGACAGGCTTGCCAAGGAGACAGATACAATGCCCGAGTGGCGGTTCAATAGCTTCTTCCATGAGTACATCAACTCACGACTCATGGAAGAGAGAGTGGTTTTCTTTCCATTGGTAGTCTCTGTGTTGGATGGGAGTCGCAGCCTAACCACGGAAGTCATGGGACAACACCTAGTCATTGGGAGCAGCTGGAAAAGAGACGAGGAGTATGTGTACTACGAGGACCTGGACGTGTCGCATCTCCAGTCTTTGACAGTATACGGAGCTTGGAAGTCCCTCTTCGTCCCTTACAAGATGAAATCGGTCCGGGTGCTGGATCTAGAGGGCACTACTCATGTTGGTTTTGGTGACGATGAACTCAAGCGGATCTTGGAGCTGCTTCCTCGCCTCAGGTTTCTCTCACTGAGAGGGCACCGAGAAATCACTCATCTCCCGGATTCCTTGTCTGGCCTCAAGTATCTCCAGACTCTGGATATCAGGCACACCTCAGTTGTCTACATTGCGCTGCAGACGCTACATGAGCTGCAGTACATTCGTGCAGGCACCACGGCGCCATGGATGGATGGTGGTAAAGGCTTGGCTTACGAGGCATCGAGTATCAGCTCATGCGCTAGTGTGGCGTCGTCCTACTTGCCCAAGTTCCTGAGACGTGGTGGACCTGTTGGACCTTGTCAAGGCGTCAAGATGCCTAGAGACGGGATCCATCACCTGAAGGCCCTGCACACGCTTGGTGCCGTCCACATCAATTCTTCAAGCGGACAGGCCATTCTGGCTGACATCTACCGTCTTAAACAGATGAGGAAGCTCGAAGTGTCAGGCATCAACCGGAAAAACAGCAAACATCTGTTCCATGCCATCATCAATCACAAGAACTTGGAATCCTTGTCACTGCAGCTGGACAAGGAGAAACATGTTGTTTGTTGGGATGACATCTCCCCTCCTTCCAGCGTGCGGAGCCTTAAGCTGTATGGGCATGTGGAGATGTTATCGGCTCGGAGGTTCAAAAATCTTAGGAACCTAAGGAAGTTGTGCCTAGAGATGAATACTACACTATTCACACAGAACGTACTGCTCCTCGGGAGCGTATCAAGTCTGCGAACTCTACGCCTTCATGTCAAGCAGAATCAAGATGGTGTCCTCCAATTTCGGGCTCATCTTTTCAGCAAACTTCAGCACCTTGAGATTGTTTGCAGGTCCAACTTACATGTAATATTTGACGAAGAAGCAATGCAGAAGCTAGAGCTGCTGAAGATCCACTGCCATGATGGGTCGTTACTGCAGCTTTCTGGGCTAAAGCATCCAGTTTCCCTCAACCAAGTGCGGGTTCTGGGTACCTTTGACGACGCACTCATGGAGTCTTGGCGGCAGCAACTGGCGGAGCATCTGAGAAACCCTGCTTTAGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015896