Os08g0100800

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Revision as of 12:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0100800| Description = Homeodomain-like containing protein| Version = NM_001067291.1 GI:115474318 GeneID:4344413| Length = 4701 bp| Defini...")
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Gene Name

Os08g0100800

Description

Homeodomain-like containing protein

Version

NM_001067291.1 GI:115474318 GeneID:4344413

Length

4701 bp

Definition

Oryza sativa Japonica Group Os08g0100800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:57602..62302

Sequence Coding Region

57816..58066,58152..58251,58632..58697,59035..59152,60091..60179
,60279..60340,61281..61377,61834..61857

Expression

GEO Profiles:Os08g0100800

Genome Context

<gbrowseImage1> name=NC_008401:57602..62302 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:57602..62302 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgattcgagcacggccatgaccttgtaccagggcgtccccttccaccagcagcagaaccagattgagatagagtccatgctctccttccaatcctcctccatccccccacctcccacacccgccaccatgcttcttgccccatcctcctcttcctccgacttccgcaactacaagttcgtcacctgttcccccgccgattggccccaccacgacctcgctatcttgaacgacggcctcctcagatatgctcatgaacccaatattatcaagtacaccaagattgccgcaatgctgcctactaggactatcagggatgtcgctttaagatgccgatggactaaagacaacgaaagtaggcgtggaaaacttgaccaagtctacacggggaaaatgataaggggcttgaaggacaacatggtttcgtctaccttggcagctaatattcaaatccaaaatccaaacaatatggtaccattctcaatatcaatgcattatcagggtcaaaacagcctgcttcataaggaagtccctgttttagatagtgcaactcagcatcttttggaggaaaataaccagttactaagccagattgccgaaaatatcgaaactttcaagacggtggagaatatggatctctttctgcggacgaataataatatcagaacagttcttaaaagaatgagtgagacgcctggtatcatgggtcagatgcctcccttgccagtacctgtaaatgaaggcagcctgaatacacttctccaaatggacagaatggttggtgcctatggtataccatga</cdnaseq>

Protein Sequence

<aaseq>MAADSSTAMTLYQGVPFHQQQNQIEIESMLSFQSSSIPPPPTPA TMLLAPSSSSSDFRNYKFVTCSPADWPHHDLAILNDGLLRYAHEPNIIKYTKIAAMLP TRTIRDVALRCRWTKDNESRRGKLDQVYTGKMIRGLKDNMVSSTLAANIQIQNPNNMV PFSISMHYQGQNSLLHKEVPVLDSATQHLLEENNQLLSQIAENIETFKTVENMDLFLR TNNNIRTVLKRMSETPGIMGQMPPLPVPVNEGSLNTLLQMDRMVGAYGIP</aaseq>

Gene Sequence

<dnaseqindica>215..465#551..650#1031..1096#1434..1551#2490..2578#2678..2739#3680..3776#4233..4256#gtgctgctgttgagagctgttggctcttcttgctttcttcttcttcttcttcttgcagacgacgagacgagatagagattatttgagactctctcacacacacacacaaagagaaagagagcagagagagagagagagagtgtgtgtgtgtcgtcaatggcgacgacgtccagatagcatagctagggtttcgtttgcaggtgggccgggggagatggccgccgattcgagcacggccatgaccttgtaccagggcgtccccttccaccagcagcagaaccagattgagatagagtccatgctctccttccaatcctcctccatccccccacctcccacacccgccaccatgcttcttgccccatcctcctcttcctccgacttccgcaactacaagttcgtcacctgttcccccgccgattggccccaccacgacctcgctatcttgaacgacggcctcctcaggtttctccttgatttttcctgcaattcaccctctctttctttccattaactcaatcaattctactctactctccttccttactagatatgctcatgaacccaatattatcaagtacaccaagattgccgcaatgctgcctactaggactatcagggatgtcgctttaagatgccgatggactaaagtaagtacttcgtccgtatatatgctactacttcctttttccctccctagctccatttacctaccatgccactgcatatgcttctcttccacctaacttacctttcaactaacaagtataaatgattattaactgaatgacaacaaactatatatcaatgcctcttttttttctcttactttcatcccaacctggaactaaccaattaccaaatgcaaacttcctacacaacttgattgcaagctggaataacatatcatatctcactttagctttcaatgtttgcccctagggcctatatttcttaacactgtttatagactctttctaacttaccaggtgtaattgccattgcctattttgttcaactgccattccaggacaacgaaagtaggcgtggaaaacttgaccaagtctacacggggaaaatgataaggggcttgaaggtattctttcattcaacgattgttctacttagacatctcatctgctactcgtggttcaacaaagcactaggcgctactcgcgtggcgcctaggtcagaccaactagtctaatccaacaagttagcaagcatattacataaaaaaaagtagactacataacactgaaacaccacccaatgtagtccagctgcctaatgcaccatctaatgcctaatcatggcggctacccgggcactattttaggatgtcaagatcctttagttcatttctgtacttctgctcaccccctcctgtcccctctcttctgcattatgaagttgcttggacataactgcaggacaacatggtttcgtctaccttggcagctaatattcaaatccaaaatccaaacaatatggtaccattctcaatatcaatgcattatcagggtcaaaacagcctgcttcataaggaaggtcagtcagtcccacagttaaacatattacgtttgttccttcaaatgtgatcacttgtttttgtgctagtgctttatatggcatatttgaacttaagctgttggtcaaagttgtttgaagagcaattcattgatattgtcgataggataaatggtgtagataggttatttcttcttgttcactttgggtagttcaattctagtgatttggtttaatcctgtagcctagcgattacagtgctcaagtagcacctccaggtcctgggttcaactccccacacaagcgaattacaggcctagttaaaaaaagtcactcgctggcccctcgtaaaaacgtgttaagaatcgacttatggagggtgggccctcgtgtagggggtaggtgcctcaaagcacaggttaaggactgatccatagggagcgagcccgcatgtggtgggctagggctcgtggcttttctcgaccggtttggttgaggcttcttcttaatggaaagccatgggggcggtcattcccccgctgatcgagttttttctctggtagcttagtgttgcacctgatagtactagcacccagtggctaggatctatcggcttctcctaagtttgtgtgcctagatctatgggcttcactaattatctgagagtttacactgagaaattatatcaaccttatttgaaaacacagaatcgtgaattcgtgatttgatcatggttgtgaagttggtgctctttattattaccctagtcgttacatgccaatcctgatgcttgtatctgttctgttgacacggttctgttcttttgtaccatggagtagtagcaataactctgcttagagaagataacttaattttttttcttatgagatatcctgtagctatttcctgctggttatatttggccctgatgatgttcgtttgttcccattctgaagcagtccctgttttagatagtgcaactcagcatcttttggaggaaaataaccagttactaagccagattgccgaaaatatcgaaactttcaaggttttcttactgatatgtgctatcccttatttctctatccatcgataggtgaaagcttaagttgttgtaatcatgcttgaaatttcaaattacttacagacggtggagaatatggatctctttctgcggacgaataataatatcagaacagttcttaaaaggtatgatattgtgatatgctgcattttgctcatgtttgatttacttcgtgcatgctactttaggtacacacaacacgcaacatgcataagttggttgtatcactttcctgtcatctgttttaatttcagtgtgttcctggcaccttgccattgcctgtactttatcaatatgaatgtgattggagcagggttcacaaaaccgcttagttttcatgaaatttcaaggtttttgagccagctcaagctaacaaaccatttggtaaactggtcattcgaaagaaaaaatcaaactgagttcaagatgttgacaatttatcctaattttacagtttccaaacggtttttgaaaaaaccaacaaaaaccacttggatttttcgatcagtgaacgattttgtgaaccctggattggaggagtcttgcatttcttggacgaagaaagttaacttccagcctgtgcaccaattaagggtgcatgcagcatgtggacaccatgatttgaaccctgatgggtggagaatatggtgcttccctagagagtcttgcattcaccacttgtgcacgttaatcttaagtcaaggagactccttttttgtgcttgcaggagtctgccactatgccccacatatattaacgagcaccgctatacttacaatcttctgtttactatggttgtacaatcaaatgttcctctcctagcgttattaatggctgcaagttctggtccaatagaaaatttggttccaccgctccacgtggacagcgtggtgtttgatcgtattaaaaatttaaaatcgtatctaacatcgaacgcatagtattttcgtatattaatgcagtgagatgcagaagtaagcatgatcaagccggaacattttaccgtcatatttcatcgctccctgtctaagttagctaatttgtttataaaaaaaaatgttgtagaatgagtgagacgcctggtatcatgggtcagatgcctcccttgccagtacctgtaaatgaaggcagcctgaatacacttctccaaatggacagaatggtaaggctataatcacatgtctgtaggacacccccactaaatgcatagctgttgatttgttgtcctaagtagtatccattgttgtatgttaaaattgtgcctggtcttatccggctattatacggtaacaactactagcaagtacaaaattaatatttctatcatagtttggagaactgaagccatttcttactaatacatatgttaataatatgaaacatgctataccaaaaagggacgtagaaaaaaaagggtaaatgaagcttcagccgttttttttcttttagttagatcctttctttttaactgtgttgctccttgttttgggttttgtttttctataaggactctgcttatcaccagtaatgtttcattatttggttcagctttgagtttgagttgtttttgcgtttggaactgttatgattaatctgttattgttgttttatcctgtaggttggtgcctatggtataccatgaaactcccatatggacgcgggactgatgtaaaagatcctgtttggaaagggggagagatgtattgcatagcatcctatcggggaagttgacagagaggagcctttgcctgatttgtactaatggcatgaagacaaccaaaggatgctagagcttagactaaccaaggtgccacgggataagtaatgttttttgaggattttctttttctttttcctttgaattgttttagctgccgtgtgtctatccttgattattggggaagaacatgccatcagtcaggcgggtatgcgggtactttcttggttgctgcaagaaagtggagtacatgctgccgctgcactttattcaatagaaagggaatgtctgtaaatattgggtcaggtgtggtggtggttggtattctaaggccgctgttaatgtaaaagaacgtctgttctctcggtac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0100800, RefSeq:Os08g0100800