BGIOSGA015943

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Revision as of 04:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015943| Description = Os11g0592400 protein| Definition = Oryza sativa Indica Group BGIOSGA015943, complete gene.| tag = OS11G0592400| tid ...")
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Gene Name

BGIOSGA015943

Description

Os11g0592400 protein

Definition

Oryza sativa Indica Group BGIOSGA015943, complete gene.

LocusTag

OS11G0592400

Ensembl Transcript ID

BGIOSGA015943-TA

Ensembl Protein ID

BGIOSGA015943-PA

Length

5814

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5096292..5102105

Sequence Coding Region

5096292..5096984,5099854..5100201,5100579..5100648,5100968..5101260,5101485..5101544
,5101625..5101714,5101812..5102105

Genome Context

<gbrowseImage1> name=IndicaChromosome04:5096292..5102105 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:5096292..5102105 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCATCTCCCCTTCCATCCACCTCCACCTCCACCACCCGCCTCGCCTCCACCGCCTCCTCCACCTCTCCACCGCCTCCCCCTACCCATGGCTCTCCGCCTGGCCGACCGCCCACCGCCGCCGCGTCCCCCTCCGCCGCCCCGCCTCCGCGCTCGACCTCCGCCCGGAGCCCTCCCCTTCCTCCGACTCCGACGACGACGCCGCCTTCGGCACCAGCCGCTCCTCCTCCCGCTCCACCATGTCCCTCATCCTCTCCCGCCTCCGCAATTCCGGCTACTCCTACTCCCCCCCGGAGCTCCCGCCGCGCCCGCCGAGGGGCTCGGTGGAGGACGTGTTCCGCGTCGACGACGGGGTGGTGCCGAACGCGCGGGGAGGGTTCGACGACGACGCGGAGTCGGCGCTGGTGGACGCGCGGTTCCCGTGGGAGCTGCCGATGCCGCCGCCCGAGGCGGGGCCCAGGGCGGCGAGGTCGAAGGCGTGGATGGCGGAGCTGACGCTCCCCGAGGCCGAGCTGAGGAGGCTGAGGCACGCCGGGATGAGGCTCAAGTCGAGGATCAAGGTGGGCGGCGCCGGGGTCACCAGGGAGATCGTGGAGAGGATCAGGGACAGGTGGAGGAACGACGAGGTGGTCAGGATCAAGGTCACCGGCACGCCCGCGCTCAACATGCGCCTCTTCCACGAGATACTCGAGAAATTGACAGGTGGTGTAATGCTTTCGAGGAACAATGACTTTATGGTCTTCTACAGAGGAAAGGATTTCTTGTCCCCAGAACTCGCGGAGAAACTGCTAGAGAGGGAAAGATGGGCAAAGTCCTTACAAGATGAGGAGCAAGCACGATTAAATGCAGCGTCTTCCTTTTCTTCCAGAACTGAGGCACCTGTAGAGCCTACTGTGGCTGGTACCCTTGGAGAAACTCTTGAGGCTAACTCTAAATATGGAAATAAACTGGATGAGAATTATGAGAACAAGATGACTAGAACTGTAGAAGCTGCAAGACATGCTGACCTTGTAAGGAAGCTAGAGTGGAAGCTCCAACTTGCACAGAAGAAGATAGAAAAAGCTGAAAGGGTCCTTGGAAAAGTTGAGACAGCCCTGAAGCCAACTGAAGGCAGGAGAGGAGTTTTTGATGGCACGATTGAAAATATGCACTTGCACTGGAAGTACAGGGAACTAGTGAAAATACTTGTGAAAGCAAAGTCTTTTGGAGATGTCAAGAAGATTGCATTGTCTCTTGAAGCTGAGAGTGGGGGTATTTTAGTTTCTGTGGACAAAGTCTCCAAAGGTTATGCCATCGTTGTGTTCCGTGGGAAGGACTATGCACGCCCTTCTAAGCTGAGACCCAGGAATCTTTTGTCAAAGCGGAAGGCTTTAGCTCGATCCATCGAAATTCAGAGACGCGAGGCCCTCAGTCATCATATCGCAACCTTGAACAGAAGAGTAAAGAAGCTCAAAGCAGAACTGCTCCAAATGGAAGGGGTGAAAGAGGAAGGAGATGTGGAGTTGTATGCCAAACTTGATTCTGCTTATTCCAGTGACGAGGAAGATGTGGAGGATGAGGATGATGAGGCCTACCTCAGGAGTTTCGACAATTCGGTAGCTGTCCAGAACGGTGATGATCGAACCTCCCTTGATGGCAGCGACGCCAATTCTGACGACGAGGGTGACTACTCTGACGAGGACAATGACGAAGACGACGACAATGATGAAGAGGATGGTTTTGATTATGAAAACGATGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGGTGCATGTAGGCTGCACGGCCTACGCTCCTCCTTCCAAGCCTAGCCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MAISPSIHLHLHHPPRLHRLLHLSTASPYPWLSAWPTAHRRRVPLRRPASALDLRPEPSPSSDSDDDAAFGTSRSSSRSTMSLILSRLRNSGYSYSPPELPPRPPRGSVEDVFRVDDGVVPNARGGFDDDAESALVDARFPWELPMPPPEAGPRAARSKAWMAELTLPEAELRRLRHAGMRLKSRIKVGGAGVTREIVERIRDRWRNDEVVRIKVTGTPALNMRLFHEILEKLTGGVMLSRNNDFMVFYRGKDFLSPELAEKLLERERWAKSLQDEEQARLNAASSFSSRTEAPVEPTVAGTLGETLEANSKYGNKLDENYENKMTRTVEAARHADLVRKLEWKLQLAQKKIEKAERVLGKVETALKPTEGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKVSKGYAIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQRREALSHHIATLNRRVKKLKAELLQMEGVKEEGDVELYAKLDSAYSSDEEDVEDEDDEAYLRSFDNSVAVQNGDDRTSLDGSDANSDDEGDYSDEDNDEDDDNDEEDGFDYENDDEXXXXXXXXXXXXXXXXXQVHVGCTAYAPPSKPSQ</aaseq>

Gene Sequence

<dnaseqindica>1..693#3563..3910#4288..4357#4677..4969#5194..5253#5334..5423#5521..5814#ATGGCCATCTCCCCTTCCATCCACCTCCACCTCCACCACCCGCCTCGCCTCCACCGCCTCCTCCACCTCTCCACCGCCTCCCCCTACCCATGGCTCTCCGCCTGGCCGACCGCCCACCGCCGCCGCGTCCCCCTCCGCCGCCCCGCCTCCGCGCTCGACCTCCGCCCGGAGCCCTCCCCTTCCTCCGACTCCGACGACGACGCCGCCTTCGGCACCAGCCGCTCCTCCTCCCGCTCCACCATGTCCCTCATCCTCTCCCGCCTCCGCAATTCCGGCTACTCCTACTCCCCCCCGGAGCTCCCGCCGCGCCCGCCGAGGGGCTCGGTGGAGGACGTGTTCCGCGTCGACGACGGGGTGGTGCCGAACGCGCGGGGAGGGTTCGACGACGACGCGGAGTCGGCGCTGGTGGACGCGCGGTTCCCGTGGGAGCTGCCGATGCCGCCGCCCGAGGCGGGGCCCAGGGCGGCGAGGTCGAAGGCGTGGATGGCGGAGCTGACGCTCCCCGAGGCCGAGCTGAGGAGGCTGAGGCACGCCGGGATGAGGCTCAAGTCGAGGATCAAGGTGGGCGGCGCCGGGGTCACCAGGGAGATCGTGGAGAGGATCAGGGACAGGTGGAGGAACGACGAGGTGGTCAGGATCAAGGTCACCGGCACGCCCGCGCTCAACATGCGCCTCTTCCACGAGATACTCGAGGTGCATTGCCGATTTCGCAATTATTGTGTTCCTTGAAGTTGTTTAATGCAGCACTATAGATTATTGCAAGCGGGAAAATGCTGAATTGCTGGAACATTTCTCAGAAGTTAAACTAATTGCTAGACGCTCACGCTGCATCATAAATTTAGAATTGGTGACCTTTTCAGTTTTTCTTAGTGGAGTTGTAACTAGTATTGATGCCCTATGTGAACTACAGGAGTTTTAGGATTTGATTACTGGTAGAATTCTTAGTGATTTGGTACTTGGGAAGCTTAAGCACAAAATGTGAGGTTGAGCACTGTTTACTTCACCGCTTTGTTTCATAAATTGCTTATGAAGTTATCCCTGAGCAATACCATTTAGCCTGTAAAGAGATTCGGTTGTTGTGATGAACTGGAGAGTGAAGGTCGGGTGTGTTTACAGTGGTTATAACTATTGGTCTCTATGATAATTATTGATACTGTTGTTTGCTCACTCCAGTTCTTCCCAGCTGTTGAATTTGTTCAACTGAGCACCTGACATCCAAGTGCTATTATTTAGCTTTGTTGTAAAAAGGTTCTGACGAAAAACGTTTAAATGCCAAGCAAATATTTCAGCAAATCTCATGCTTATAAAATCAAATTTTGAAACTAAACTGAATTGAGGACTAATGTCGAAAGCAAGATGTTGTATGCTGCATAAATATTCCATTTTTGCTGCTGTAATGTAGCTCCCATGATAAATAACAGAGAAATTGACTTACCGGCTAAGTGGAAATTATACAACCGAAGGTTACTGTGGATCTGTTAACATGTACACTGAATGTATAAATTTCTTAATATGGTATTTCATTTCTTCATTCTGCAACCAACCTGTCAGATATTTTTGGATATATGTGTTATGTGCCTGGTAACTCTAGTTAATCTGATCTCTGTGTCTTTTGATTGATGGCGGTTAGAGAAAAACAGGGGGTTTGGTAATATGGAGGTCTGGAACTTCTGTTTCTCTGTACAGGGGAGTAGCCTATGACATACCTGAGCCCACTAAAGGAACAAGTAAGAATACACAAACTCTTGGTATGAAGTCCTCCATCAAAGAGCCACCTGGTCATTCGTTGCTGCCTAATGAGAAAGTAAACGAGATGCAAGACAACAATGGAGCATTGGTATCTAATGCTGAGAAAGATACACTAGTTGAACCAGTTTCAGAAATCAAATATGAAGATGAATTGACAAGCTATAGGATGAGCTTGGACCAAGATACGATGACTGGCCAAGACCTGATCCATCACCAGTAGATGCAGACTTGCTTCCTGCAACTGTACCAGGATATAAGCCCCCTTTCAGAGTTCTACCATATGGAGTACGGCCATCTCTCAGCAGAAGGGACACTACAAATTTACGGCGTCTTGGCCCGGTGGGGCTGCCACCTCACTTTGCTCCTTGGGACCTTTTCTATTCATTTTTAGGTAATTATTATTATTTCAATCAATTCTTAATATGGTGGAGAATTGGAGTGGACCTTTTCTTTTCTGGTGAATATTAGGGGGAAGCAGACAAATCCAAGGGTTAACAGATGGTATGGTGAAGTTGTGGGAGAAAAGTCTATGCAAAAATCGCTCTGAAAAGAGGAGTGCAGCTTACCACAAGTGAGAGGATGGCTGAAGATATAGAGGTATATATACACTCTTTAACTTTACTATCCCCTTGGCATATTGAGTGCTTTACAGCTTAGAAATGTTCATCGATTGGGCAACAGCACAGTACAAGTTTATGCATGCAACATAAATGTTTCGAGTCCTTTCTTGCACATATATTGAGATAAAAGATACAACATCAATTATATTCCTCCTTTTTTTAGAACCCTATACTTTTATGCACCTCGTTTTTTGCCTTTCATTTCCCTCGAAAAAGTCTGCATTTCATTTGTCTAGCTAATTTAATATGTTGTGTCCGTTTGAGTTTGAGAGAATATAGCCTATGGAATCTAGGACCTTGATGTATTTATTGGAAGTCAATTATATGTTATATCATTCTCTTTGATCTGGAAAGAGACCATGCGTTGATACATGCCTGGATGTTTGGTTTCTGAATGGTTATTTGTAGCTCCAGTTCATTTGTTTAGGTGGGGCAGAAGATAGCTACTGACTGATGATTCCAAGGAGCTGAGAAATATTTTTTTATTTTCGTTGGAGTTGGTAATGGGTGCAAAGAACTTTGTGAGGCATAGGTGAATATTTATGGTGATATAACTCCATGATGATTGGGGGGAAGGCATTAGCAAGAGTTATAGTTTTGGGTAATTGTGTTGCACCTCTGCTTGGATTATGACATCTTGGTAATTTGTGCATACAAGTATATAAAATAACTCATGCATCTTTAGTTGAATGAGCACTACATATGCTATACTACACCTGACACCTTTTTAATGTCTGGCTGAACATAGGCTTCTGCAGCAATGTTGAGGTTCCTCTATTTTGTTTGGGGTTAGATTATATTATTTAGGATTTATGAAGTCCTGTCCTGCCTGATATACTCTATCAGCTTCTCAAGTTGTTAACTACTTAACTGTTAGTAGTAATTTACTGCTGCCTCTTGGAAGGGCCAAAAGGGTAAATGGAATTATGTCAACATGTCAATTAACCTGATTTATAGTCCTATTTTTACTTATAGTCCTATTTTTTACTTTGACATGTATACAGCTATACACATATACCAGTCATATCTAGTACATTTGAATCCTCATATTCAGAGACAGTTTGTCTAATACAATTTCACAGCCTTTATTCGATATAGGAGATCATTGAACTTCTTAAAATATTTTCACCATTCAATTTCGTATGTTGTTAAGGAATGAATTGATTATTCATGATGCTCTTTTTGTACACCAGAAATTGACAGGTGGTGTAATGCTTTCGAGGAACAATGACTTTATGGTCTTCTACAGAGGAAAGGATTTCTTGTCCCCAGAACTCGCGGAGAAACTGCTAGAGAGGGAAAGATGGGCAAAGTCCTTACAAGATGAGGAGCAAGCACGATTAAATGCAGCGTCTTCCTTTTCTTCCAGAACTGAGGCACCTGTAGAGCCTACTGTGGCTGGTACCCTTGGAGAAACTCTTGAGGCTAACTCTAAATATGGAAATAAACTGGATGAGAATTATGAGAACAAGATGACTAGAACTGTAGAAGCTGCAAGACATGCTGACCTTGTAAGGAAGCTAGAGTGGAAGCTCCAACTTGTAAGTGAGAGTTTGAGTAGTAAGGCTATTTTGTTAAATTTATCAGTCCGCTTTGTAAGATTTCATCTTCTGAACAGTCCAGTTTTTATAGCAAGATTGCATTTTAGATCAGTTTAGATATCTCAAGATAAATATAGCAACTTATATGGTGTACAGACTAGCCTTGCATCAGAAAACAAAACCAACACACTACAATTACGATTTTCTAATATGTGATAAAACTTTATTTGTTGAAAGTTAGGGAAATCGACATAGCTCTCACTTGTATTCTTTCTGTAGAGTACAAATCCACATATTTACTTGCAATCTATTTAGTATGTACACATAAAATTATGCTTGTGTAGTTAAAATGCTTGCGTCACATTGTTTTTTTGCAGGCACAGAAGAAGATAGAAAAAGCTGAAAGGGTCCTTGGAAAAGTTGAGACAGCCCTGAAGCCAACTGAAGGTATCCAACCGCCTGAAACAATAACAGATGAAGAGAGATTCATGTTTCGGAAACTTGGTCTAAGGATGAAGGCATTCCTGCTCCTTGGTAATATTTAATAAAAAGTTTCGGGCCATTTTGTTTTCTTTTGATTTTGTACTACTGAGAAGCCTTTTGGATCCCAGTATATTATTTTTTTTATTTGCAATTCCTTCCATGTATTGTTTCCTAAGTAGTGTTCATTTTGTTATGATCTGATCTACATGACATGTAGTCTTCACAGTGTTCCTTATTTTTGCATTTAAAGTTACGTACTAAGTTTTTATTGTACCGCTTTCAGGCAGGAGAGGAGTTTTTGATGGCACGATTGAAAATATGCACTTGCACTGGAAGTACAGGGAACTAGTGAAAATACTTGTGAAAGCAAAGTCTTTTGGAGATGTCAAGAAGATTGCATTGTCTCTTGAAGCTGAGAGTGGGGGTATTTTAGTTTCTGTGGACAAAGTCTCCAAAGGTTATGCCATCGTTGTGTTCCGTGGGAAGGACTATGCACGCCCTTCTAAGCTGAGACCCAGGAATCTTTTGTCAAAGCGGAAGGCTTTAGCTCGATCCATCGAAATTCAGAGACGCGAGGTACTGTTTTGACTCTTGGATGGCTAAGATTGTTTACTTGGTATTCAACACGTATCATAAAGTTAGGTACTCCAAAGGAAGGGAAACTGATTCTGTTATAGCATCATATGTAGTATTCTGCTAGAGTAACCCTCACTGTCTGAAAATCAAAATTGTCTAACAGTTTCTGAACAATAACCCATTTATTACAGCCACTAACATCATTCTGCTGTTCTCTGCAACAGGCCCTCAGTCATCATATCGCAACCTTGAACAGAAGAGTAAAGAAGCTCAAAGCAGAACTGGTAAGTTTGTTCCCCAACTTAGCCTACACAAAATATGTGCGCGCTAGATGTGTCCCATGCTAAATTTCTGTTCTTTTTAGCTCCAAATGGAAGGGGTGAAAGAGGAAGGAGATGTGGAGTTGTATGCCAAACTTGATTCTGCTTATTCCAGTGACGAGGAAGATGTGGAGGTGAGTTGCGTTGGATCCACAACATTCTCTGTTCAACTCACCCTTTGCTGATGCCTTCCTGAAAATGTTGTAACTTCACTTGGTTCTGCTATTGTAGGATGAGGATGATGAGGCCTACCTCAGGAGTTTCGACAATTCGGTAGCTGTCCAGAACGGTGATGATCGAACCTCCCTTGATGGCAGCGACGCCAATTCTGACGACGAGGGTGACTACTCTGACGAGGACAATGACGAAGACGACGACAATGATGAAGAGGATGGTTTTGATTATGAAAACGATGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGGTGCATGTAGGCTGCACGGCCTACGCTCCTCCTTCCAAGCCTAGCCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015943