BGIOSGA015952

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Revision as of 04:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015952| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015952, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA015952

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015952, complete gene.

LocusTag

OSJNBB0026E15.11

Ensembl Transcript ID

BGIOSGA015952-TA

Ensembl Protein ID

BGIOSGA015952-PA

Length

2441

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5448180..5450620

Sequence Coding Region

5448180..5448339,5448502..5448579,5448663..5448740,5448863..5448922,5449222..5449299
,5449428..5450620

Genome Context

<gbrowseImage1> name=IndicaChromosome04:5448180..5450620 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:5448180..5450620 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGCGAGGGGAATCGAAGGCGGCGACGAGGGGCGCAAATCGATCGTCGTCGTCGTCGTCGTGGAAGAGCAGATATATTGGATATGGCTTAGTTCTTGGCTTCGTGTTGATGCTGCTCTACTTGATGGTCAATGCGCAGTTCAGCAACAGCCCAAATGCTTATTTAGGCCCAGCAACAACTAGTAAAACTGAATCGATTCCTGCTACAACATATCAAGGGAATCAAGCATGGCAAGAAGATGGGAGCAGAGGACTGGAGGAAGGCCACAGGGAGGAGGTAGCTAGCACACAACGATCAACAGGCCAACGTCAAGAGAAAGATGACGAAAGCGAGAAGCAACGAACAGAGAAAAATTCAATCGAGGAACAATTAGGCAACGACAGGAGCTCTAACTACGGGGAGGAAGGACGCCAATCCGAGAAGAAGGATACGATAGAATTCAGTGAATTTGGAGGAGGAACGGACGACTTCAACAATGTTGCCAACACCAAGCCGATCTGCGACACGTCGTTCGGCAAGTACGACATCTGCGTGCTCGACGGCGACACGCGAGCGCAGGGAGGCGGCGGCGCCGGCGCCGCCGCGGTCACCCTGGTCTCGCCGCGCGCGGCGCCGCGGGAGTGGAAGATAAAGCCCTACTCCCGGAAGTACCTCGACGGCCTCAAACCCGTCACGGTGAGGTCCGTCCCCAACCCGGAGGACGCCCCGCCGTGCACGACGCGGCTGAACGTCCCGGCGATGGTGATCGAGCTCGGCGGGCTCACCGGCAACTACTGGCACGACTTCACCGACGTACTCGTCCCGCTCTTCATCGGCGCGCGTCGCTTCGGCGGCGAGGTCCAGCTCCTCGTCGTCAACCTGCTGCCCTTCTGGGTGGACAAGTACCGGAGGATCTTCAGCCAGATCTCGCGGCACGACATCGTCGACCTGGAGAAGGACGACGACCGCGGCGTCGTCCGCTGTTACCCGCACGTGGTGGTCGGCTATGGCAGCCGCAAGGAGTTCACCATCGACCCCTCCCTCGACGACACCGGCGGCGGCTACACCATGGTCAACTTCACCGAGTTCTTGAGGCAATCCTACTCGCTCCCGCGTGACCGGCCGATCAAGCTCGGTACCAACCACGGTGCACGGCCGCGGATGATGATCCTGGAGCGGACCAACAGCCGGAAGCTGATGAACCTCCCGGAGGTCGCCGCGGCCGCGCGGGCGGCGGGGTTCGAGGTGACCGTCGCCGGCGGCCGTCCGACGAGCACCTACGACGAGTTCGCCCGGGAGGTGAACTCGTACGACGTGATGGTGGGCGTGCACGGCGCCGGGCTGACCAACTGCGTGTTCCTCCCCACGGGGGCCGTGCTGCTGCAGATCGTGCCGTACGGCCGGCTCGAGAGCATCGCGCAGACGGACTTCGGCGAGCCGGCGCGAGACATGGGGCTCCGGTACATCGAGTACGACATCGCCGCCGACGAGAGCTCGCTGATGGACGTGTTCGGCAAGGACCACCCCATGATCAAGGACCCCGTCGCCGTGCACTTGAGCGGGTGGGGAAACGTGGCCGAGTGGTACCTCGGGAAGCAGGACGTGCGGGTCAACATTGAGCGGTTTAGGCCGTTTCTGACGCAGGCGTTGGAGCACCTGCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MRRGESKAATRGANRSSSSSSWKSRYIGYGLVLGFVLMLLYLMVNAQFSNSPNAYLGPATTSKTESIPATTYQGNQAWQEDGSRGLEEGHREEVASTQRSTGQRQEKDDESEKQRTEKNSIEEQLGNDRSSNYGEEGRQSEKKDTIEFSEFGGGTDDFNNVANTKPICDTSFGKYDICVLDGDTRAQGGGGAGAAAVTLVSPRAAPREWKIKPYSRKYLDGLKPVTVRSVPNPEDAPPCTTRLNVPAMVIELGGLTGNYWHDFTDVLVPLFIGARRFGGEVQLLVVNLLPFWVDKYRRIFSQISRHDIVDLEKDDDRGVVRCYPHVVVGYGSRKEFTIDPSLDDTGGGYTMVNFTEFLRQSYSLPRDRPIKLGTNHGARPRMMILERTNSRKLMNLPEVAAAARAAGFEVTVAGGRPTSTYDEFAREVNSYDVMVGVHGAGLTNCVFLPTGAVLLQIVPYGRLESIAQTDFGEPARDMGLRYIEYDIAADESSLMDVFGKDHPMIKDPVAVHLSGWGNVAEWYLGKQDVRVNIERFRPFLTQALEHLQ</aaseq>

Gene Sequence

<dnaseqindica>1..160#323..400#484..561#684..743#1043..1120#1249..2441#ATGAGGCGAGGGGAATCGAAGGCGGCGACGAGGGGCGCAAATCGATCGTCGTCGTCGTCGTCGTGGAAGAGCAGATATATTGGATATGGCTTAGTTCTTGGCTTCGTGTTGATGCTGCTCTACTTGATGGTCAATGCGCAGTTCAGCAACAGCCCAAATGGTAATTATGATTACTTTTTCTCCATATGTGCTTGCTTAATTATCATCTTCCTTTGTTTGCCTTGGAAACTCGAGAAAGTCTAGAGTTAGACAACAACATGGAGATTCATGTGTTCAATCTTTCCAACATGGAGGTTCATGTCCTGATTTCCTTTTGCCGCAGCTTATTTAGGCCCAGCAACAACTAGTAAAACTGAATCGATTCCTGCTACAACATATCAAGGGAATCAAGCATGGCAAGGTATATATACAGCCTTAACATGATTAAGAATTGCTGTTAGATAATCCCGTTTCTTTTCTTTGCTGAAATTGTGAAGTCTGTAGAAGATGGGAGCAGAGGACTGGAGGAAGGCCACAGGGAGGAGGTAGCTAGCACACAACGATCAACAGGCCAACGTCAAGGTAAACGTCAGCTACGTCATTCCAGAGAGCATACTAATCAAGCGACAACAATTACGACATATCCTTTTACCTACTACAAGATATCGAATTCAAATTATTCTCTTTCTTTTTTGCTCCTTCAGAGAAAGATGACGAAAGCGAGAAGCAACGAACAGAGAAAAATTCAATCGAGGAACAATTAGGTACCTTGTTATTTTCATTTCTACCACTACACGTTAAGCTATAAAATAGCATGTAAGCAACCAAATAATAATTTGTTGGTAAAACTGGTATATATGTGTTATTGATATTGTTAAGGAAAAGAGAGTAATTAGATATCAAAATAAAGAGAATTTAAATGAGAGGTGATTGGTGGGAAAAATAGTACTACAAAATTCCTTATATATGACCAAATTTGACTTCTCAAGTTTGTTTTTCTTTCACCGACTTGCCAGCGTGCCACAGTATCACATTTTATCTTACTATGTGTATATGATGTCAGGCAACGACAGGAGCTCTAACTACGGGGAGGAAGGACGCCAATCCGAGAAGAAGGATACGATAGAATTCAGTGAATTTGGTAAATAATAATATTCCTGATGGACCAGCTCTTCATTTCACATGTCATGAATTGCAGCCCCAATACGTTATACCAGTTGTCAAGCGTGGGCGCGTTGTTGACGTGGTGATCAACTGATCATTGATCAGGAGGAGGAACGGACGACTTCAACAATGTTGCCAACACCAAGCCGATCTGCGACACGTCGTTCGGCAAGTACGACATCTGCGTGCTCGACGGCGACACGCGAGCGCAGGGAGGCGGCGGCGCCGGCGCCGCCGCGGTCACCCTGGTCTCGCCGCGCGCGGCGCCGCGGGAGTGGAAGATAAAGCCCTACTCCCGGAAGTACCTCGACGGCCTCAAACCCGTCACGGTGAGGTCCGTCCCCAACCCGGAGGACGCCCCGCCGTGCACGACGCGGCTGAACGTCCCGGCGATGGTGATCGAGCTCGGCGGGCTCACCGGCAACTACTGGCACGACTTCACCGACGTACTCGTCCCGCTCTTCATCGGCGCGCGTCGCTTCGGCGGCGAGGTCCAGCTCCTCGTCGTCAACCTGCTGCCCTTCTGGGTGGACAAGTACCGGAGGATCTTCAGCCAGATCTCGCGGCACGACATCGTCGACCTGGAGAAGGACGACGACCGCGGCGTCGTCCGCTGTTACCCGCACGTGGTGGTCGGCTATGGCAGCCGCAAGGAGTTCACCATCGACCCCTCCCTCGACGACACCGGCGGCGGCTACACCATGGTCAACTTCACCGAGTTCTTGAGGCAATCCTACTCGCTCCCGCGTGACCGGCCGATCAAGCTCGGTACCAACCACGGTGCACGGCCGCGGATGATGATCCTGGAGCGGACCAACAGCCGGAAGCTGATGAACCTCCCGGAGGTCGCCGCGGCCGCGCGGGCGGCGGGGTTCGAGGTGACCGTCGCCGGCGGCCGTCCGACGAGCACCTACGACGAGTTCGCCCGGGAGGTGAACTCGTACGACGTGATGGTGGGCGTGCACGGCGCCGGGCTGACCAACTGCGTGTTCCTCCCCACGGGGGCCGTGCTGCTGCAGATCGTGCCGTACGGCCGGCTCGAGAGCATCGCGCAGACGGACTTCGGCGAGCCGGCGCGAGACATGGGGCTCCGGTACATCGAGTACGACATCGCCGCCGACGAGAGCTCGCTGATGGACGTGTTCGGCAAGGACCACCCCATGATCAAGGACCCCGTCGCCGTGCACTTGAGCGGGTGGGGAAACGTGGCCGAGTGGTACCTCGGGAAGCAGGACGTGCGGGTCAACATTGAGCGGTTTAGGCCGTTTCTGACGCAGGCGTTGGAGCACCTGCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015952