BGIOSGA015955

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Revision as of 04:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015955| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015955, complete gene.| tag = OsI_149...")
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Gene Name

BGIOSGA015955

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015955, complete gene.

LocusTag

OsI_14980

Ensembl Transcript ID

BGIOSGA015955-TA

Ensembl Protein ID

BGIOSGA015955-PA

Length

6226

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5544726..5550951

Sequence Coding Region

5544726..5544910,5545065..5545141,5546615..5546878,5546994..5547057,5547165..5547259
,5547416..5547450,5547759..5548639,5548974..5549270,5549353..5549811
,5549939..5550087,5550169..5550458,5550542..5550666,5550795..5550951

Genome Context

<gbrowseImage1> name=IndicaChromosome04:5544726..5550951 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:5544726..5550951 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCGATGGCGAGGCCTTTCGGCGGCTACCTCCGCCGCTGCTTCTGCTGCTCCTTCTTGCTGCCGGCGTCGCGCGCGGCCAGCAGACGACGGCGCCGCCGGTGGTGCCGGATGCGCTCAACAACCTCACCAGAGACGTCGCCGACTACATCTCCCACCGCTTCAGCTTCTGCGTCGCCGACCCGACGGAGGATTGGAATGAGGCCTTCAATTACACCTCGGATCTTGGATTCGTGCAGAACTGCCTCGCGGAGACAAGAGGTGATTTGGGAGGGCGTCTGTGCACACCGAACGAAGTGAAATTCTACTTCTCGAGTTTGTATGATCGAAAAGGCGAAAAAAACCTCTTTCTGAAAACCAACATAAACTGCAACAGATCATCTTGGGTTCAGGGCTGTGAGCCAGGGTGGGCTTGCTCTGTAGGTTCAGGCCCTAACCCCCAAGGCAATATTCCACCAAGAACTGCAAGTTGTCAGCCGTGTTGCGAAGGCTTCTTCTGTCCCCGTGGTCTTACATGCATGTTGCCTTGTCCATTGGGATCATACTGTCCGCGTGCCACTGTGAACACAACCACTGGTCTTTGTGATCCATACAAGTATCAGATAACTCCAAATACAACTGGCTGCGGGGGTGCTGACACATGGGCTGATTTTGGGAGCACTGAAGAGATGTTCTGTCCAGCCGGCACTATTGCAGACTGGGTTCCACCACTCAAGACAGGCATGTTGTTTGTATTTCTTCTGATCATATACAACTGTTCAGGCCAGTTCCTGACTATCCGCGAGAAACGGAAAGCGAGATCGAGGGAGAATGCTATTCAGTTGGCACGTCAGCAGCTCAAAGCGCATGAGGGATGGAAGGCGGCGAAACGACTGGCGAGGAAGCATGTCAATGACATGCAGAGTCATCTCTCACGTACATTCTCTCGTAGGAGATCATTCCGTCAGCATCTGGACTCGGAGAATTCTGGCCATAGGTTGCAGGAAGCACCACTGTTTATGAACCAGGAGTTGTCGGATTCTGCTGCATTTTCAGCTCATCAGAGCACTGGTGAGATATCTGAAGTCATGCCTTCAGTCGTTGTGGATGTTAGCGATGATGGAGAAATTGTTGCCGGCAAGGATAGATCTGCACCAAAAGGCAAGCACAGATCAACACACACGCAGATCTTCAAGTACGCATATGGTGAGATCGAGAAGGAGAAGGTCAGGCAACAGGAGAACAAGAACCTGACCTTCACTGGAGTGCTCTCCATGGTGTCAGAGCAGCAGAAGGAGATAACAAGGCCTCTGCTCAAGGTTGAGTTCAAAGACCTGACCCTGTCACTTGGAAAGAAGAAGCTGTTGAGGTCTATCAATGGCGAACTCCGGCCTGGCCGTGTCACTGCCGTCATGGGCCCATCCGGGGCCGGCAAGACCACATTCCTCAATGCTGTTACAGGGAAGGTAGCTGGCTATAAGGTGTCAGGTTCAGTTCTTGTCAATGGGAGGCATGACAACATCCGTTCTTACAAGAAGATCATTGGATTTGTTCCTCAAGATGATGTTGTTCATGGGAATTTAACAGTGGAAGAGAACCTTTGGTTCAGTGCAAAGTGCAGGCTCTCTGCGACAATGGCACACCGCCACAAGGTCCTCACTGTGGAGAGGGTCATAGACTCCCTGGACCTTCAGGGAGTCAGAAGTTCATTGGTTGGAACTGTGGAGAAGCGCGGGATCTCTGGTGGACAGAGGAAGCGTGTCAATGTGGGTATTGAAATGGTGATGGAGCCATCACTTCTGATCCTGGATGAACCAACCTCTGGCCTGGACAGCTCCTCTTCACAACTGCTCCTCCGAGCACTACGTCATGAGGCGCTCGAAGGCGTAAATGTTTGCGCAGTTGTTCATCAACCGAGCTACACATTGTACAACATGTTTGATGATCTGATACTTCTGGCAAAAGGAGGTCTAATTGTTTACAATGGTCCGGTCAAGAGTGTGGAGGATTACTTCTCAACTCTTGGGATCACTGTCCCTGAAAGAGTTAACCCACCAGATCACTACATTGACATTCTTGAGGGCATTGTGAAGCCTGAGTCAGGCATCAATGCGAAGCATTTTCCATTGCACTGGATGCTCTACAATGGCTATGAAGTGCCAAATGACATGAAAGATGATCTCAAGGCAATAGGTGAACAGAGACCACATTTGGGGTCCAGCCCTTCAGCTGGATCAACACCTCATTGCCTTCCTCATGTCAGGAATGCTTTTGCTGAAGAGCGTGATCGTATCGAGCACCATTTGTCTAAACCAAAGGATTTGTCCAGCAGAAGAACACCAGGGGTGATTAGACAGTACAAGTACTACCTAGGAAGGGTCACAAAACAGAGGTTGCGCGAAGCTAGGTTGCTTGCAGTTGATTTTCTGATACTAGGCCTTGCTGGGATCTGTCTGGGTACTATTGCAAAGCTCAGTGATCCAAATTTTGGGATGCCTGGCTACATTTACACCATAATTGCAGTTTCTCTGTTGTGCAAGATTGCAGCACTAAGGTCGTTTTCACTTGAAAGATTGCAATACTTGAGGGAAAGAGAGTCAGGGATGAGCTCATTGGCATACTTTCTTGCTAGGGATACAATTGATCATTTCAGCACGATTGTGAAGCCGATCGTTTACCTCTCCATGTTCTACTACTTCAATAATCCAAGATCTACAATTACCGATAACTATATCATTCTCCTCGCACTTGTGTACTGCGTAACCGGTATAGGATACACTTTTGCTATCTGCTTCAACCCTGGTTCTGCACAACTGTGTTCTGCATTGATCCCAGTTGTTCTGACTTTGTTATCCACTCAAAATAATACCCCTGCAATTCTCAATAGATTATGCTATCCAAAGTGGGCATTAGAGGGTTTCATAATTGTAAATGCAAAAAGGTATCCTGGAGTTTGGCTTATAACTCGCTGTGGGTTGTTGTTCAGAAGTCGTTTCGACATTCATCATTACATGCTCTGTATTTTGGTTCTGTTTATGTATGGTCTGTTCTTCAGAATTGTTGCATTTGTGGCCTTGATTTTAGTGAAGAAGAGATGA</cdnaseq>

Protein Sequence

<aaseq>MRDGEAFRRLPPPLLLLLLLAAGVARGQQTTAPPVVPDALNNLTRDVADYISHRFSFCVADPTEDWNEAFNYTSDLGFVQNCLAETRGDLGGRLCTPNEVKFYFSSLYDRKGEKNLFLKTNINCNRSSWVQGCEPGWACSVGSGPNPQGNIPPRTASCQPCCEGFFCPRGLTCMLPCPLGSYCPRATVNTTTGLCDPYKYQITPNTTGCGGADTWADFGSTEEMFCPAGTIADWVPPLKTGMLFVFLLIIYNCSGQFLTIREKRKARSRENAIQLARQQLKAHEGWKAAKRLARKHVNDMQSHLSRTFSRRRSFRQHLDSENSGHRLQEAPLFMNQELSDSAAFSAHQSTGEISEVMPSVVVDVSDDGEIVAGKDRSAPKGKHRSTHTQIFKYAYGEIEKEKVRQQENKNLTFTGVLSMVSEQQKEITRPLLKVEFKDLTLSLGKKKLLRSINGELRPGRVTAVMGPSGAGKTTFLNAVTGKVAGYKVSGSVLVNGRHDNIRSYKKIIGFVPQDDVVHGNLTVEENLWFSAKCRLSATMAHRHKVLTVERVIDSLDLQGVRSSLVGTVEKRGISGGQRKRVNVGIEMVMEPSLLILDEPTSGLDSSSSQLLLRALRHEALEGVNVCAVVHQPSYTLYNMFDDLILLAKGGLIVYNGPVKSVEDYFSTLGITVPERVNPPDHYIDILEGIVKPESGINAKHFPLHWMLYNGYEVPNDMKDDLKAIGEQRPHLGSSPSAGSTPHCLPHVRNAFAEERDRIEHHLSKPKDLSSRRTPGVIRQYKYYLGRVTKQRLREARLLAVDFLILGLAGICLGTIAKLSDPNFGMPGYIYTIIAVSLLCKIAALRSFSLERLQYLRERESGMSSLAYFLARDTIDHFSTIVKPIVYLSMFYYFNNPRSTITDNYIILLALVYCVTGIGYTFAICFNPGSAQLCSALIPVVLTLLSTQNNTPAILNRLCYPKWALEGFIIVNAKRYPGVWLITRCGLLFRSRFDIHHYMLCILVLFMYGLFFRIVAFVALILVKKR</aaseq>

Gene Sequence

<dnaseqindica>1..185#340..416#1890..2153#2269..2332#2440..2534#2691..2725#3034..3914#4249..4545#4628..5086#5214..5362#5444..5733#5817..5941#6070..6226#ATGCGCGATGGCGAGGCCTTTCGGCGGCTACCTCCGCCGCTGCTTCTGCTGCTCCTTCTTGCTGCCGGCGTCGCGCGCGGCCAGCAGACGACGGCGCCGCCGGTGGTGCCGGATGCGCTCAACAACCTCACCAGAGACGTCGCCGACTACATCTCCCACCGCTTCAGCTTCTGCGTCGCCGACCCGTACGCTCTTCTTTCTCTTCTCCCCCCACCCCCCGTTCATTTCGGCGGCGCCGTTCTTCGCCGCCGACCTCTTAAAACTTTTTTCCTTTAGCTTTCTTGATTTCAATGGATTTGTTGATGATTTTTGGTTGGTTTTGGTGTGTGTTCGCTTCAGGACGGAGGATTGGAATGAGGCCTTCAATTACACCTCGGATCTTGGATTCGTGCAGAACTGCCTCGCGGAGACAAGAGGTAATTAATTAAATTTAAATTCAGTTAGATTTCCTGTTCGATTGCTTGTTTGATTGGTTCGTGTGTTGCTTTCTTCATCGTTGAAGCGGTTTCTCCTTTTTTATTTGTTTCCCATCTGAATTTAGCGGATTGAATGTGACGGCCATGTTTACACATTTTTTAATCGAATATTTATCCGTGTATGCTCCAATCTAATGAACTGAACCAACCTGAGTTTTGAACTTATTTTTATTTATAAGCACATGGTTTACTTTTTCTTTTTGTAATTTCAAGTGATTGGTTTTCAGATAACACTACTTTTTTCGATGGTGCGGTGGTGCCAATTCAGATAATTATATTAGAATTCAGTCATTAGCATAAATGCACTTCAAATTCTTAGAAATGGTTTTCTATTCGGAGATCCTAATTCAAGGTTGTCTAAGCCGACTCGCAAATATTTTGTCGTCGTATACTGTTTGTGCTTGCTTTGTAAGCATCCCAGTTTCTTTTTTTTTTTAATTTTGGTTTGGAATCTAGTTTCTAATATTCACCTCTTATAATATTCATAGTTATGTCCTAGATGCGACATTGGGATATGCTGATTGAGATTTGGTTCTTTGGAATTGTTCACCTGCACATGCATTTCCTGAACATTGTTTAGTAGGAGTGCTTAGCAGAGGATGAAACGATCTGATGGAGGACAAGTGGAGCATGCAACCCTATAATAATCATCCATTCCGTAATTTAGTAGGGAAAGACTAAAATTATAACTTGTTAATGTTAGCTGAGTGTGACACGGGACTATGGTGTTTGACGTGATCAACTCTAACTAATATTTTCTATTCGTTTGTTTAGTCTTAAGAAGCTAGACAGTTTGACCTGTTCCTATCTCTAATTATCCTGCACTTATTATTTATTTTACATGTCACAACAATCCAATTCGGTAGTTAGATTCAGTTCTGGACTTCTGATATAGTATAGTAACTTGTTTCAATTCGACAAATCTGTTGAATGTGACAAAAGTAACCATTATGATTAAGTTTGAAGTCAAATATCTCATTTTCACATTGTATCATAGAAGTGACTAATTCCGACTACCATGCTTCCACACTGAAAGGCGAGGCTTGAACACTGATTGGTGTGGCAATGCCAAGCACAAAGCCTGAAAAAATAATTTACAGTATCATTTTCCTTATGGTACTGTGACAAAATCATTATGATTATGATTATGCCTCTGATCCGTTGATTGTGGCTAAAATAATCATTATGATTAAGTCTGAAGTCGCATGTTTTATTTTCACATTATATCATAGAAGTGACTACCACGCTTCCACGCTGAAATGCGAGGCTTGAACACTGAACATGTCTAGTTTGCAACATTTTCTCCTTAAAAAAAATGATTTACAACATCATTTTCCTTACCAAGGCAGGTCAGGCTGCCCATGAACATGTCTAGTTTTGGCATTCTCTAATGTGAAAAAGATATTCATTCAGGTGATTTGGGAGGGCGTCTGTGCACACCGAACGAAGTGAAATTCTACTTCTCGAGTTTGTATGATCGAAAAGGCGAAAAAAACCTCTTTCTGAAAACCAACATAAACTGCAACAGATCATCTTGGGTTCAGGGCTGTGAGCCAGGGTGGGCTTGCTCTGTAGGTTCAGGCCCTAACCCCCAAGGCAATATTCCACCAAGAACTGCAAGTTGTCAGCCGTGTTGCGAAGGCTTCTTCTGTCCCCGTGGTCTTACATGCATGTTGCGTGAGTGATTTCTACATTTCCCGCATGGCTGTTCTTATTGTCAATTAATTTGTGTGGAGACCATATATTTATCTTGCTGAATGACTTGAGTTTCATGTTTGTTTTTTTGCTTTAGCTTGTCCATTGGGATCATACTGTCCGCGTGCCACTGTGAACACAACCACTGGTCTTTGTGATCCGTAAGATTTTTTTTTTTTAAAAAAATTCTGTTCTTATTGTTCTGCATTTGCCTTCTTGAAAATATAAACACAATGCTTACAAGGTGAATTTGCTGAACTTTGATTAGATACAAGTATCAGATAACTCCAAATACAACTGGCTGCGGGGGTGCTGACACATGGGCTGATTTTGGGAGCACTGAAGAGATGTTCTGTCCAGCCGGTTACTACTGTCCAACACCAACAAAAAAGGAACCTTGTAGCGAAGGGTACTGATCCAATCATACTCCTTGTATGACTTATTTGACATATATTACAAAGATTATTTGATTTTAAACACTAGGTGACTGATGATTCTTGTTTTTTTCCTCCCCTTCAGGCACTATTGCAGACTGGGTTCCACCACTCAAGACAGTAAGCATCATTAAAATAGATTGATACTTCATTTTCTTATTGAATCATGAAGTTATAGTATCTACCATCCAGCAAGCTGAATTTATTCAAAATCTGCAGAATGTATCATAAAGGGATCCTGCAAGGAGAAGACAGAGAATGAAAACATTGTCATTCTTGGTGGTTGTTTAGTGGTAAATTCCATCAACAAAGTCATCATTTCACTATCTTGCTAGCTTGATGGTTGCCTCTTTTAAGATCCAGTGAGTGCAATGGACTGCAGACTGTACTGGAAAATGTGCCTAATTCAGGTTGAACACTTGGTGCAGGGCATGTTGTTTGTATTTCTTCTGATCATATACAACTGTTCAGGCCAGTTCCTGACTATCCGCGAGAAACGGAAAGCGAGATCGAGGGAGAATGCTATTCAGTTGGCACGTCAGCAGCTCAAAGCGCATGAGGGATGGAAGGCGGCGAAACGACTGGCGAGGAAGCATGTCAATGACATGCAGAGTCATCTCTCACGTACATTCTCTCGTAGGAGATCATTCCGTCAGCATCTGGACTCGGAGAATTCTGGCCATAGGTTGCAGGAAGCACCACTGTTTATGAACCAGGAGTTGTCGGATTCTGCTGCATTTTCAGCTCATCAGAGCACTGGTGAGATATCTGAAGTCATGCCTTCAGTCGTTGTGGATGTTAGCGATGATGGAGAAATTGTTGCCGGCAAGGATAGATCTGCACCAAAAGGCAAGCACAGATCAACACACACGCAGATCTTCAAGTACGCATATGGTGAGATCGAGAAGGAGAAGGTCAGGCAACAGGAGAACAAGAACCTGACCTTCACTGGAGTGCTCTCCATGGTGTCAGAGCAGCAGAAGGAGATAACAAGGCCTCTGCTCAAGGTTGAGTTCAAAGACCTGACCCTGTCACTTGGAAAGAAGAAGCTGTTGAGGTCTATCAATGGCGAACTCCGGCCTGGCCGTGTCACTGCCGTCATGGGCCCATCCGGGGCCGGCAAGACCACATTCCTCAATGCTGTTACAGGGAAGGTAGCTGGCTATAAGGTGTCAGGTTCAGTTCTTGTCAATGGGAGGCATGACAACATCCGTTCTTACAAGAAGATCATTGGATTTGTTCCTCAAGATGATGTTGTTCATGGGAATTTAACAGTGGAAGAGAACCTTTGGTTCAGTGCAAAGTGCAGGTAAAATTATTAATATAAAAAAGTTTACTTGACAATTACTATCTCTGTTTCAAAATATAAGACATATTTTGTTTCGTTAGGACAATTCTATGACCAACAATTACTCTACTGGGATATGATTTTGTGACACAAAATTGGATTTGTTAGATTTGTGTTCAAAAGTACTTACTTACGATTATGCGTTTGTATCACATAAGTCATATCATAATAAAGTAATTGCTGGTCAAATCCTTGTCCTAACAAAACAAAACAATTGAAACGGAGGAAGTATTTATATCAGATTGCCATTTCAGTAATTAGCTCAGCATATTCTTATCATTTCTACTATCTTCAGGCTCTCTGCGACAATGGCACACCGCCACAAGGTCCTCACTGTGGAGAGGGTCATAGACTCCCTGGACCTTCAGGGAGTCAGAAGTTCATTGGTTGGAACTGTGGAGAAGCGCGGGATCTCTGGTGGACAGAGGAAGCGTGTCAATGTGGGTATTGAAATGGTGATGGAGCCATCACTTCTGATCCTGGATGAACCAACCTCTGGCCTGGACAGCTCCTCTTCACAACTGCTCCTCCGAGCACTACGTCATGAGGCGCTCGAAGGCGTAAATGTTTGCGCAGTTGTTCATCAACCGAGGTTACTCTCAGACCATCATTTTCTGAAGATAGTACTCATCTTTCTGAAAGATTTCTAATATTTTCTTGTTTGTGTTATTCAGCTACACATTGTACAACATGTTTGATGATCTGATACTTCTGGCAAAAGGAGGTCTAATTGTTTACAATGGTCCGGTCAAGAGTGTGGAGGATTACTTCTCAACTCTTGGGATCACTGTCCCTGAAAGAGTTAACCCACCAGATCACTACATTGACATTCTTGAGGGCATTGTGAAGCCTGAGTCAGGCATCAATGCGAAGCATTTTCCATTGCACTGGATGCTCTACAATGGCTATGAAGTGCCAAATGACATGAAAGATGATCTCAAGGCAATAGGTGAACAGAGACCACATTTGGGGTCCAGCCCTTCAGCTGGATCAACACCTCATTGCCTTCCTCATGTCAGGAATGCTTTTGCTGAAGAGCGTGATCGTATCGAGCACCATTTGTCTAAACCAAAGGATTTGTCCAGCAGAAGAACACCAGGGGTGATTAGACAGTACAAGTACTACCTAGGAAGGTATGTTCAATTCAATGCATATAATCTTTTTATGAAATCTTGAACAACCATGTGATCAAATTTTCATTGTTCCAATGATAAAATTTTCGAAAGATTAAAAGTTATTCTTTCATGTGTGACATCACAGGGTCACAAAACAGAGGTTGCGCGAAGCTAGGTTGCTTGCAGTTGATTTTCTGATACTAGGCCTTGCTGGGATCTGTCTGGGTACTATTGCAAAGCTCAGTGATCCAAATTTTGGGATGCCTGGCTACATTTACACCATAATTGCAGTTTGTAAGTTCAGAGTATTCAGATTATACTGTCATTGCAGTACGAACTTGATTATTTGACTGACATAAATTACTACTTCTGCAGCTCTGTTGTGCAAGATTGCAGCACTAAGGTCGTTTTCACTTGAAAGATTGCAATACTTGAGGGAAAGAGAGTCAGGGATGAGCTCATTGGCATACTTTCTTGCTAGGGATACAATTGATCATTTCAGCACGATTGTGAAGCCGATCGTTTACCTCTCCATGTTCTACTACTTCAATAATCCAAGATCTACAATTACCGATAACTATATCATTCTCCTCGCACTTGTGTACTGCGTAACCGGTATAGGATACACTTTTGCTATCTGCTTCAACCCTGGTTCTGCACAACTGGTATGTATCATAAAGATTGTTCAACTTTTGCAGTTTCTTCTGATTAATAATATATTTGGAGACTAACCCTGAAACTTTTGCAGTGTTCTGCATTGATCCCAGTTGTTCTGACTTTGTTATCCACTCAAAATAATACCCCTGCAATTCTCAATAGATTATGCTATCCAAAGTGGGCATTAGAGGGTTTCATAATTGTAAATGCAAAAAGGTATTACTTACTCATCATGCTTGCATGTTGCATGATCATATCTAGATACACAATCATCATCACATCTGCCAAAAAAATCATTTGTAAATTAGCAGCTCGAGTTAATGCGTTTTTCTTTTCTATTTCAGGTATCCTGGAGTTTGGCTTATAACTCGCTGTGGGTTGTTGTTCAGAAGTCGTTTCGACATTCATCATTACATGCTCTGTATTTTGGTTCTGTTTATGTATGGTCTGTTCTTCAGAATTGTTGCATTTGTGGCCTTGATTTTAGTGAAGAAGAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015955

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA015955&oldid=64849"