BGIOSGA015973

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Revision as of 04:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015973| Description = cDNA clone:001-111-D06, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA015973, complete gene.| t...")
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Gene Name

BGIOSGA015973

Description

cDNA clone:001-111-D06, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA015973, complete gene.

LocusTag

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Ensembl Transcript ID

BGIOSGA015973-TA

Ensembl Protein ID

BGIOSGA015973-PA

Length

3556

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:6287641..6291196

Sequence Coding Region

6287641..6288006,6289505..6289585,6290696..6290784,6290971..6291196

Genome Context

<gbrowseImage1> name=IndicaChromosome04:6287641..6291196 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:6287641..6291196 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGATCCTAGTGGCGGTGAAGCGGGTGGTGGACTACGCCGTCAAGGTGCGGGTGAGGCCCGACCGGACGGGCGTCGAGACGGCGAGCGTCAAGATGTCCATGAACCCATTCTGCGAGATCGCCGTCGAGGAGGCGCTCCGCCTCCGCGAGGCCGGCGCCGCCACCGAGGTCGTCGCCGCCACCGTCGGCCCCTCCCAGTCCGCCGACACCCTCCGCACCGCGCTCGCCATGGGCGCCGACCGCGCCGTCCACGTCCTCCACGACCCCGACCCCTCCCGCCCCCTCCTCCCCCTCGCCGTCGCCAAGATCCTCCGCGCCCTCGCGCTCCAGGAGAACCCCGGCCTCGTCATCCTCGGCAAGCAGGCAATTGATGATGATTGCAACCAAACAGGACAAATGCTAGCTGGGTTGCTTAATTGGCCACAAGGAACCTTTGCCTCGAAGGTTATATTGAACAAGGAAAAGGCTACTGTGGAGAGAGAGGTCGATGGCGGAATCGAGACCATTAGCTTGGATTTGCCTGCAGTTATCACCACGGATTTGAGACTGAACCAACCAAGGTATGCAACATTGCCAAACATAATGAAGGCAAAATCAAAAGTCATCAAGAAAGTCACCCCCGAAGATCTGGATGTAGATATCAGATCAGACATGGAAGTAGTTGAGGTCACTGAACCACCTAAGAGAAAAGCCGGTGTCATTCTTTCATCCGTCGATGAGCTCATTGACAGGTTGAAAAATGAAGCCCGTGTTTTATAA</cdnaseq>

Protein Sequence

<aaseq>MKILVAVKRVVDYAVKVRVRPDRTGVETASVKMSMNPFCEIAVEEALRLREAGAATEVVAATVGPSQSADTLRTALAMGADRAVHVLHDPDPSRPLLPLAVAKILRALALQENPGLVILGKQAIDDDCNQTGQMLAGLLNWPQGTFASKVILNKEKATVEREVDGGIETISLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPEDLDVDIRSDMEVVEVTEPPKRKAGVILSSVDELIDRLKNEARVL</aaseq>

Gene Sequence

<dnaseqindica>1..366#1865..1945#3056..3144#3331..3556#ATGAAGATCCTAGTGGCGGTGAAGCGGGTGGTGGACTACGCCGTCAAGGTGCGGGTGAGGCCCGACCGGACGGGCGTCGAGACGGCGAGCGTCAAGATGTCCATGAACCCATTCTGCGAGATCGCCGTCGAGGAGGCGCTCCGCCTCCGCGAGGCCGGCGCCGCCACCGAGGTCGTCGCCGCCACCGTCGGCCCCTCCCAGTCCGCCGACACCCTCCGCACCGCGCTCGCCATGGGCGCCGACCGCGCCGTCCACGTCCTCCACGACCCCGACCCCTCCCGCCCCCTCCTCCCCCTCGCCGTCGCCAAGATCCTCCGCGCCCTCGCGCTCCAGGAGAACCCCGGCCTCGTCATCCTCGGCAAGCAGGTAGGCGCGCCCAATCTTCGATTTGACCGATTTTGTGGTATAGAGATTGAATTTACTTGATTTCACTGATAAATTCGTGGGATTGTAGGTAGGTGATGTTCCTGCATGATTACCTAGTTGTGGTGATTCTTTTTTGCTTCACAGTGTGATTATCCAAGGATTTTCTTAATGGGAAGAGTTCATGGGATTTCAGGATTATTATATATTTCTTGCCTCATTACATATCTTTTATGTTTTATTGCATTAGGGATTAGGGATTCTTGTTAGCTTGTTGAGACTGGGATTGGGGTATCTCAATTTGATCGAGAGCTTTCATTCTTAATGCGAAGAGTTCATGGGATTTCAGGATTATTATATACTTCTTGCCTCATTACATATCTTGTTATGTTTTATTGCATTAGGGATTAGGGATTCTTGTTAGCTTGTTGAGACTGGGATTGGGGTATCTCAATTTGATCGAGAGCTTTCATTCTTAATGTTCTTAATAATGTTCTTAATGCGAAGAGTTCATGGGATTTCAGGATTATTATATACTTCTTGCCTCATTACATATCTTGTTATGTTTTATTGCATTAGGGATTCTTGTTAGCTTGTTGAGACTGGGATTGGGTATCTCAATTTGATCGAGAGCTTTCATTTTTGCAGCATAATTAATTGTGTGCTTGTGATTACATTTTGACGGCTTCATCTAATCAAGACATATTCCTGTGATTTGGGGGGCATGACTTTTGTGAATATGGAATGATTGACTCTGTATTTGGAGCTTAGTACTTCATTCTTACGATAATAAAGGTTGCTATTTCCCCGCAAAAAAAAAATAATAAAGGTTGCTATTAGTGTGTTTTGGGTTGAATCTTAGTGGTTTACTTCTTGGTTCGTTGAAGCTTGTGTAAATTGACAATGTTGATATCCATGTGATTGTATAGTGCAAATTTAGTTACCAATATGCACTATGGTACCAACAGTGAGATCCCATCTCAAAAAATAAAGTGAGATCTGAGAGAACCATGGTTGTGTTAATGCAAGCCATTTGCTGATTTTGCTTCTACCTTAATTTAATTTATTGCCCTAAAGTGAGGTACAGTATTATTCTGAGACACTAGGGTGCATCTCTATACAGTGTACTTGTGTTCAATATCCATGAAATTGGCAAATTGCTCCTACACATGTCTTCGTAGTGCTTGACTTTGTTGACCCTGTTTAATATGAAAGTTCAAAGTGTAGAATTGGTGCATTTTCCCCCCTTTAGACCTAATGCTCCTGGATTATTTCATGACATTGTCTAATTGCTGCATATAAGACTTGAATCCTTAGTACTATTTTATTAAACTTTGACGTCTTGATTTTTTTTCAAAATGTTGACAGTCTTTGCTGTCATGAGCAAATGAGTACGTACAAAAGACAAATAAGAAAATATTAGCTAACTAGTGACAGGAAATTTAACTTGAAATTATATATATTGATAATCATCAGGTATTATATCTTCTGGTAATTGCAGGCAATTGATGATGATTGCAACCAAACAGGACAAATGCTAGCTGGGTTGCTTAATTGGCCACAAGGAACCTTTGCCTCGAAGGTGTGTTTTTTGTTACTCCTTCCATTGCTTTTTACTGCTGTCATGATTGCCCTCGCATGCAAGTGGGGCGCCAAGAGCATGGCACAGCAGGCTGGGCTGGGCTTGTCATTTTAAGTTCATTACTTGAAGATTTGTTCTCCCCTTCTCATCACTTCCCCCCGTGCCTGTTAATCCTCTCCTCAAACACAGCTCCTGGCTGGGGAGATCCAGGGCCAAAACCCCCAGTTACCCAAGGGTTGTCCCATTGATATTTAAACCTAGACAACCATTACCTTTAATTTGATTACCAAATGAGTTCTTATCAATGTATTTGCTCCTTCAATTTTTTTCTGCATTTAAATGATCTGCTCCTAGACCCTAAACTGTATGAAGCTCGTGTTGAACTTTGGTATAGTTTCTCCCACAATTGTGGAATTGGCCACATAGGACCTTACAGTTTTTTTGGTTTGCTCATTTTCGTCCTTCTGCCATGTGGCGTCCCGTGTGGACTTGTCCAGTCAGCACCTTCTTTCCAATTTAGACTATGCAAGTGACTGAAATGCGTGCTTTGCATCACCTGAAAAAACAAATAATGAACTACATAGGGTCATCCTACATCGATGGTAAGAAAAATTAGGGCAATTCAGTTACTTTATATAGTTTGTAGCATTTGAAGGCCCTGAATATTGCCTGCCCGAACCCTGGATATTGCCTGCCTGAGACCATCTGTGATGTCATAAGAGGCATTACCATTAAAACAAGCCAACTAACGAAGCTCAGGGCGCTAACATACCAATTCACAGTTGAATGACCAATTTGAGCAAGAAGCAAGGGACCAAATGAACTATTAATCTTTCAGATTGTGGAAGGAATTTCTGAGCACTGATGGAAGTTTGCTGTTCCGTTTTTTTAATCCCATTTTAGGAACATTAATTTTTTCTTCTTTCAAGATATCTGATTTCCTTTTGTTGGCCGAACATAGTAGAGCAACCAAAAAAAATCACTGTAATGGCGTTTTCTATGGGTTCACATTGACCAAGTGTTTATTGGTTTTCTCTTATCATGGTGTTTCCAATTCAAGTTTGTGTTACACAGGCAGTTGTATTCAAAGATGCTGTTTGATTCTGGCAGGTTATATTGAACAAGGAAAAGGCTACTGTGGAGAGAGAGGTCGATGGCGGAATCGAGACCATTAGCTTGGATTTGCCTGCAGTTATCACGTATGTTCCATGAAACATTTATTTTCTTTCTTTTAGTTTTATTTAACAAGGCTAGTACTTCTTCGATTCTTCATAAGCATAGCGATCATTTAGTGATCTCTGTCACATAGCTGGATCTTTGTATTGCATTGTGGTTTTGAGCCAATTTCAGAAATTGCCTAAACTATTGTTTGATTTTTGTGACAGCACGGATTTGAGACTGAACCAACCAAGGTATGCAACATTGCCAAACATAATGAAGGCAAAATCAAAAGTCATCAAGAAAGTCACCCCCGAAGATCTGGATGTAGATATCAGATCAGACATGGAAGTAGTTGAGGTCACTGAACCACCTAAGAGAAAAGCCGGTGTCATTCTTTCATCCGTCGATGAGCTCATTGACAGGTTGAAAAATGAAGCCCGTGTTTTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015973