BGIOSGA016008

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Revision as of 04:23, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016008| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016008, complete gene.| tag = OsI_150...")
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Gene Name

BGIOSGA016008

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016008, complete gene.

LocusTag

OsI_15087

Ensembl Transcript ID

BGIOSGA016008-TA

Ensembl Protein ID

BGIOSGA016008-PA

Length

4619

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:7407830..7412448

Sequence Coding Region

7407830..7408371,7410127..7410160,7410471..7410563,7412089..7412448

Genome Context

<gbrowseImage1> name=IndicaChromosome04:7407830..7412448 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:7407830..7412448 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCACATTCGGCGTGCCCATCACCGACGAGACGCTGGAGGCGATGTCGCGGTACGCCGGGAAGAGCATCAGCCAGGTGGACCGCGCGCGGGAGGCGATGCGCCTCATCCACGCCGAGGGCAAGAACCTGGACGCGCTGCAGCACGCGCTGGGGCTCAAGGCCTCCTACGGCGACGGCGTCTCCGCCATGGTGCTCGTCTACAACGCCACCGGCGCCGCGCTGGAGCTCGTCGACGGGGAGGGCGGGACGATGGACTGGTACGGCTACGTCTACCACGAGCAGCCGCCGGCGTCGTTCCAGAACGGCCAGTGGCTGGCGTTCCTCCACGCCCACCCGACGGCGCAGTCGATCGGCTGCGAGGCGGCGCGCGTCTTCCGCGGCCGCGACGTCGACGGCCAGGTCCGGGACTTCATGGTCGCATGGTCCCTTCCTTGGAGCGCCACGCAGAACTCTGTAAGTACTGCACCACCAGCAAGTATGACCACTCATCGTCGCAACATGCCAACATTAATAATTGTTGATATTGCAATAAAACACTGGGTTGATATACATGAGATTGGGTGCTTTTGTGAGTTTGAGTGTCTATCAACTGCTTTGGCCATTGGATCTGTTAATACAACACGTGTTCCACGAAATCTGAAGATGATTGTTGATTCCCATGACCCCTTCATCACCATACCTCGCCAACTACGTCAGCGGAGACCGCGGCCTCCTTCGTTCCATCAGTATAATCTTCGACCGTTGCCCGGGCGTGATAACTTGGTATCAGAGCACGTTCGTCCGCCTATGGCCATGTCTGGACTACCGTCAAACATAGAGGTGACAGCGTCGCAGCTGACCGCCATTATGGACCAACTTAAGCGGATGGAGGCAACGATGGCTGATCACACCATCGCCATCAGCCGCCTAGACAACAAGATCGCTGAAGTCGACACGAAGGGGATCGTGGGCACCAAACCCTCGGCCTCAAACCAGCATCAGCATGACGGCACAACAGACAGTCGGGTTCCACGCTACCACAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MSTFGVPITDETLEAMSRYAGKSISQVDRAREAMRLIHAEGKNLDALQHALGLKASYGDGVSAMVLVYNATGAALELVDGEGGTMDWYGYVYHEQPPASFQNGQWLAFLHAHPTAQSIGCEAARVFRGRDVDGQVRDFMVAWSLPWSATQNSVSTAPPASMTTHRRNMPTLIIVDIAIKHWVDIHEIGCFCEFECLSTALAIGSVNTTRVPRNLKMIVDSHDPFITIPRQLRQRRPRPPSFHQYNLRPLPGRDNLVSEHVRPPMAMSGLPSNIEVTASQLTAIMDQLKRMEATMADHTIAISRLDNKIAEVDTKGIVGTKPSASNQHQHDGTTDSRVPRYHK</aaseq>

Gene Sequence

<dnaseqindica>1..542#2298..2331#2642..2734#4260..4619#ATGAGCACATTCGGCGTGCCCATCACCGACGAGACGCTGGAGGCGATGTCGCGGTACGCCGGGAAGAGCATCAGCCAGGTGGACCGCGCGCGGGAGGCGATGCGCCTCATCCACGCCGAGGGCAAGAACCTGGACGCGCTGCAGCACGCGCTGGGGCTCAAGGCCTCCTACGGCGACGGCGTCTCCGCCATGGTGCTCGTCTACAACGCCACCGGCGCCGCGCTGGAGCTCGTCGACGGGGAGGGCGGGACGATGGACTGGTACGGCTACGTCTACCACGAGCAGCCGCCGGCGTCGTTCCAGAACGGCCAGTGGCTGGCGTTCCTCCACGCCCACCCGACGGCGCAGTCGATCGGCTGCGAGGCGGCGCGCGTCTTCCGCGGCCGCGACGTCGACGGCCAGGTCCGGGACTTCATGGTCGCATGGTCCCTTCCTTGGAGCGCCACGCAGAACTCTGTAAGTACTGCACCACCAGCAAGTATGACCACTCATCGTCGCAACATGCCAACATTAATAATTGTTGATATTGCAATAAAACACTGGTAAAAACTTGTTCTAATCAAATATTATAATATGTCCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCATGGTGCTTTGAGAAGCCATCCCCAATTGCCGAGTTTCTTACGACAATCCGTCATGACCATCCAACCGGGGCTAAATACGGAGAAGTACCCTCCTCGGGAAATTAACTTAGGACTATATACACGCTCGGAGGAATATTCGTACTGAGTTGTCACCATCAGTGGCACACCTCGCTTGCGCGACATATAACCACAAATAATGATATCCAGTAATCTAAACACCACGCTTAAATTACCAAATACTACTCTAATATCATCGTAATGACATAGTCATCGTATACACGATCATTATACCCACACTATTCCATCTCCCAGATAAGCTAGCATCATAATAAATATTACTCGGATATATAATAAAACTGATATTCATATACTCGGAAAATAGTACAATACCAAAATAGTACAAAGAAGAGTATTCTAAATAATGTACAATTCTTACAAAAGAAGGAAAAGCTACTAAAGCTATACCCGAATTCTTTTGAAGACTTCGAGGACTGAAGATTCTATTCCACTATATACTCTAGAGCCTACACTAAACTTGAAAGATAAATGAAGCTTTTTGCTTAAGGTGTGTGGAAAAATAGAGAGAGACGGCTTCTTTTATAGCCTTCTAATGACGGTTGTAACGGTTGAAATGATCGGAAATACCCTTCAACCGTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCGCTCTTCTCGTCCCATCGCGCGCCGGCTCCTCCCACCGCATCCTCCTGCGCTCCTGCGCACGCCGCCTTTCACCGACATCCGCTCGCAGTCGGCCGCCTTCCACCNGCATCCGCGTCGCGATCGCCGTCCTCTCTCTCACTGCTAGACACCGACCGACCGACCTCAGCATCTGCATCTGCACGGAGGCAGCCGACTGTGGTAGTACATCATCCGTCTGACCGCCAGCTGTACATTCCTCCAGTTGCATGACATTCATGGTTGAGTCCCCTTTGACTGCGTTCTCTCCCGCTCGCGTGCCTCGGTGGTGGCATAGAGGGCAAGGACTTACTGTTTTTGGCCTGCACGATCCCCTCCTATGTCCAACGATCCTGCATGTGCAATTTACTTTCCTCTGTTTCCGTGTCTACCTGCTGCTCGCGGCACAACCGCGGTTCTTTCATCTCCGACAAAGAATACCTACGTAGGAAAGCTATCATTCATGCATCAGCATCCATCTTGAGGCTTATGCTCAATAACAAACCGATCCTTATCTTATCTGAAACTTCCCATCCAACCGCATTCGAAGCATCGGCAACTATGCNATGCGTTGATCAAGTTAATCAGACTATTACGAGACAAATTAAGCTTCAAGATAAATTTGTGGCGTGTCTAAGGTCTAAAGTTGCGGCTGTTAAGTGTTAATCCACCCAAAAAGCATCCTAATTTAACCCAACCTGAAGCCTTTATACCCGGCAAAACACTAAACTAACCTACCCTTCTAATTTCACACTATTAATTAGGCTAGTTTTGGCTAACATTGCTATCTTCAGCTTTCAACGCAAGCCCTGCAGTGTAGTAAGTAGCTCACACGAATTTTCAGAGCATGTTGTCTTACCTGGTTTTCTTGTATTGACAGGGTTGATATACATGAGATTGGGTGCTTTTGTGAGGTATGTTCTGCCTAAAGTTTCTATTGTTTATGTCTTGCCTAAATTAACTGTTCTTGTGTTTCGATAATGTTCTGTTAAACAGTGCTCAGATTTATATAGTACTAAGTTTTACTACTGTCATTGGGTGCTCAGATTTGCTGTGCATTAGTTCTAGAGAATGGCGCATATGCATTTGTAATAGAGAATGACATGTGTTTGTTCAGAGTCATTAGCTGAAATTGACAGCAAGTATATTCCAGTCAGTTAGCATAGAATCTGATATTGTTCTGATTTTGTTTCTGTTTTGTTTTTTTTCCTTTAATTCTGGTAGTTTGAGTGTCTATCAACTGCTTTGGCCATTGGATCTGTTAATACAACACGTGTTCCACGAAATCTGAAGATGATTGTTGATTCCCATGACCCCGTAATTCTGTAAAGGATGCCATCATTTTTAGGAATTTAGGATGCCCCTTGTGAAATGCGTCCTTCACTGTGGAAATGGATCAGAGAAATATCACATCTTCCTCTTAACAGCTTCCCAGGAATATGCAATTCTTTTTGGTTTTAAAAACAACAAGAGTAGGAACATCAATTCCATCTATACACTCTAAATGTGCTTGTGTTTCTTGCCCACTGACTGCACTTAGTGCAGTGTATATGTTGGGGACCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTCTTCTGGAGATTGATATTTTGGATATATGAATTGTCTATTGGCCTGTAGTTTCTATTAACCTGTATAGTTTCTGTTGACTGCTGCTAGTTAAGCTATTTCAATAGGGGTTAAACATGTGGTTTACAAACTATTGGTTATAGAAGTAGCTATTATATGTTGTTGTTCTGCTGTCAGTGACACAATATTCTCATTGTGTAGATAATACATCAACTGTGTATGGCATAGACTGACCTGTATAGTGAGAATGATGTAACCTGATTATCATATGAAGATAATGCATTATTTTCCTTTTGCAGGTAACGGAGGAGGTACTAATACCCTTGCAATAACGCGCTTCTATTATTGTGATGTACCTGAGAAATGTGCAATTAATTTGGGGAATTTCTAGCAACCAAGATTAGCTTTTAGATATTAATGATTTAGCTTCAGTTTATGTCATTTTGTTTTGTACAATTTAATCCCTGCTACTTGTTACTGTAATAGCTATCTACATTTGTATCTATAATCTCAATGTGCACTAATCTTATAGTCTGAATTGACATGCTTTCTAGACTATTGTGCAACCAATCTTAGTTAGTTTACCATTTTCGTAATTTTTTCTTTCCTTTTTAGATTTTTCTGGGTGGTGTTTTGAATTTCTGCACTTTATGCGCCGCATATTAAAATCTTTTGTAATGGTGAAACCTTCGTCCCTAGTCCAAACAAACCAATCCCCTACCTGTCCGAACAAATCTAATGCTAATCCCATGGTGGAAGGGATTGATGAGGGGATTGGGTGGCGGGAGGGTATTCACCAAATCCCCCACTTGGGTGAATCTCCCTGGGGAAATTCCCCCTTGTTGCCGAACGAGGCCTAAGGGGGTGTTTAGATCCAGGGGTGTAAAGATTTGATGTGTCACATCGAATATTATATAGGGTGTCTGTCATGTGGGGGGATATTCCGTATCATCGACGATCTCGGCAGCAGGCGCACGGTGTCGAAGGAGAGACTTCTTGAATCTTTTTGGTTTTGGTTTGTTTGGATAAGAGTTAGAGTTAGAGTTTATTTAAAGAGATGTAATCGTTAAGGAGGAATTAAGGAAAAGTTAAATCAATCTCTAATCTCCTATATGTGTTTTCTCCCTCAATTCTCTTCTTCCTCCTTGCCAGTTTCTTTCTTTCTTCTATACCAGTTCATCACCATACCTCGCCAACTACGTCAGCGGAGACCGCGGCCTCCTTCGTTCCATCAGTATAATCTTCGACCGTTGCCCGGGCGTGATAACTTGGTATCAGAGCACGTTCGTCCGCCTATGGCCATGTCTGGACTACCGTCAAACATAGAGGTGACAGCGTCGCAGCTGACCGCCATTATGGACCAACTTAAGCGGATGGAGGCAACGATGGCTGATCACACCATCGCCATCAGCCGCCTAGACAACAAGATCGCTGAAGTCGACACGAAGGGGATCGTGGGCACCAAACCCTCGGCCTCAAACCAGCATCAGCATGACGGCACAACAGACAGTCGGGTTCCACGCTACCACAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016008