BGIOSGA016010

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Revision as of 04:23, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016010| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016010, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016010

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016010, complete gene.

LocusTag

OSJNBA0033H08.17

Ensembl Transcript ID

BGIOSGA016010-TA

Ensembl Protein ID

BGIOSGA016010-PA

Length

8232

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:7471463..7479694

Sequence Coding Region

7471463..7471770,7471856..7471904,7472007..7472058,7477182..7477336,7478655..7478768
,7479542..7479694

Genome Context

<gbrowseImage1> name=IndicaChromosome04:7471463..7479694 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:7471463..7479694 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCGCCGCCGTTGCCGCCGCGGCCGCGCCGCTGCGGCGTTCGCTCCTTCCCTCCCTCAACCCGAGCTGTCTCTTCTCCTCCCTCGCGTCCTCCTCGCACCGCCTATCTCTACCGCGCGCCCTCCGCCCCGCGGGCCCTTTGCCCTCCGATGTCGAAGACTCGGACGATTCGAATGCCGGAGACGGCGCCGGCGAGGCCCTCAGGAAGAGCCGCAACGACCTGAAGCGGGAGGCTCGTCGCGCCGTGCAGTGGGGTATGGACCTCTCTAAGTTCTCCCCTCTCCAGATCAAGCGCATCCTCAGGGCTGCGTCGCTAGATCGCGAGGTGTTCGACGCTCTCATGCTCGTGAAGAGATTTGGATCAGATGTGCGGGAAGGAAAAAGGAGGCAGTTCAACTATATCGGAAGACTTCTGCGTGGTGCACAACCCGAATTGATGGACACTCTAATCCAGTATTCGAAGGATGGCGATGATAACAGGTTACTTGCATTAATGAGTGAAAATACATTCTTGATGGAAGATGAGGAAATAGAGGACTTGCCTTGCAATGAAGAAGAGGGTGACAAAGAGCATATTGAAATTGCAGATAGATGGTTTGAGGGCCTCCTTTCCAAAGACATTTCAGTTACTAATGAAATTTATGCGATACATAATGTTGAGTTTGATCGTCAGGAACTGCGGAAGCTCGTGAGGACAGTCCACATGGTCCAAGATAATATAGAAAATGAACATGAAGAGGAATCTACCATGAAGCTTTTGGGAGCAAAGAAACAACTTTTGTGCTTCCTTCGCTCCATTGCTAAGGAGGCATACTTCAAATCATAG</cdnaseq>

Protein Sequence

<aaseq>MASAAVAAAAAPLRRSLLPSLNPSCLFSSLASSSHRLSLPRALRPAGPLPSDVEDSDDSNAGDGAGEALRKSRNDLKREARRAVQWGMDLSKFSPLQIKRILRAASLDREVFDALMLVKRFGSDVREGKRRQFNYIGRLLRGAQPELMDTLIQYSKDGDDNRLLALMSENTFLMEDEEIEDLPCNEEEGDKEHIEIADRWFEGLLSKDISVTNEIYAIHNVEFDRQELRKLVRTVHMVQDNIENEHEEESTMKLLGAKKQLLCFLRSIAKEAYFKS</aaseq>

Gene Sequence

<dnaseqindica>1..308#394..442#545..596#5720..5874#7193..7306#8080..8232#ATGGCGTCCGCCGCCGTTGCCGCCGCGGCCGCGCCGCTGCGGCGTTCGCTCCTTCCCTCCCTCAACCCGAGCTGTCTCTTCTCCTCCCTCGCGTCCTCCTCGCACCGCCTATCTCTACCGCGCGCCCTCCGCCCCGCGGGCCCTTTGCCCTCCGATGTCGAAGACTCGGACGATTCGAATGCCGGAGACGGCGCCGGCGAGGCCCTCAGGAAGAGCCGCAACGACCTGAAGCGGGAGGCTCGTCGCGCCGTGCAGTGGGGTATGGACCTCTCTAAGTTCTCCCCTCTCCAGATCAAGCGCATCCTCAGGTGCCTATCCAGCCTACCTTCACATCCGATTCTTGGTAGTACTTCTTCGTTGGAGGGCACCTAGTATGTGATTCTTGTTTCTCAGGGCTGCGTCGCTAGATCGCGAGGTGTTCGACGCTCTCATGCTCGTGAAGGTACATCCTTTGTTCTGGTAATAGCTTGTATATCCGTTGTTCTTGTAATAGCTTGTATATTTGATTGCAAATCACGTTTTTGTCTGTTTTCTTGTTTTGTAGAGATTTGGATCAGATGTGCGGGAAGGAAAAAGGAGGCAGTTCAACTATATCGGTATCTTTACTTACTGGGTTAATTGGATCCATGCCACTGCAAATATGTCAATTCAAAAAAATGTCACTACTATTCAGTATATCGGCTACGTGGCACTGAAAATTGTGGAAATTGGATCCATGCCACTCCATCACGTTTTCCGTCAAAAATCTTTATTAGCCCCCAGCTGCACGTGGGCCCCCACCTCCCTTCCCTCTCTTCTCTTTCCTCTTCCTCTCTCTCCACCACCGTAGATGCGGCAGGAGGTGTCGTCTCCGTCGTCTCCATCGTTGTCTCAGAGAGGTCGGGCCAGGCTGCGCCTGCGTTGTCGTTGTTGTCGAGCACCTCGTCTCGGAGCCGGTGAGCCACGCGGTCTCTGTCACCGTTCAAGGGAGGAGGAGGTGGTGGTGGAGGAGGCATCACCGACGACTGAGTACCCATCCTCGCCACCGTTGCCGAGGACCTCCATGATGCGCGGCTAAGGCAGCGGCAGCTAGAGGGGTGCGCTATCAGCAAGGACCCTCTCCTCAATTAATCCATCGCTAGTACGCTGCTCTGATGGCTCGCTTCGCCGTCGTCGCCATCATCGTCACCCTCCTCGCCGTCACGGCCACTGTGCAGGCCCCGGGAGCGGCCCCCATCCCGGCACCCAAGATGGCCCTGCTGCCTGCTCCCCCGACGAGGTCCCCGGCCACCGCTTCCTCCATCCCGGCAAAGGACAAGAGTCCATGGTGCAACAGTCACAACAATGGCAGAGCAAGCAACAGTAGTCGCGGCACTAGCAATTTCGGTGGCGGTGGCAAAAGCTCATCGTGATAGTGGCGAGGTCTCAGTCCATCGTCATTTTTGGCTTGATGGGACAAGCAGCACTGCATCAGTCGGCATGGTGGACAAGCAGCAGTCACAATAACGACCGGGGACCTCGTCGGCATGGTGGGCTAAACTAAGCCCTTTGGTTTGAGAAAAACCGATCCTTGTTTCACCGAGGAAAAGAGAGAAATTCTGTATAAATTGATAATGCTGACTTGAATTGACTAATTCAGTTCCGCCTATTCCACATTAATGGGAGTACATTTATGTTTCTGCTTCATGAATATGATATTTTTTGGGCATTTCTAATAATAGCAAGCCTTATTCCTATTTTAGCATTTTGGATTTCAGCACTTTTAAGCTCCGGTTCGTGAAGGACCAGAGAAGCTTTCTAGTTATGAATCGGGTATAGAACCCATGGGGGGGGGGGCTTGGTTACAATTCCGAATACGCTATTACATGTTTGCGCTAGTTTTTGTTGTTTTTGATGTGGAAACGGTCTTTCTCTACCCTTGGGCAATGAGTTTCGACGTATTGGGTATATCCGTTTTTATCGAAGCTTTCATTTTCGTGCTTATCCTAGTTGTTGGTTTAGTTTATGCATGGCGAAAAGGAGCCTTGGAATGGTCTTAACTGAATATTCAGACAAAAAAAAAAGAAGGATTGCTTCTCTTCCAGGGAAGTTTCATTTTCCCAGAATGTATCCTAATTTTTGGCCTAATTCTGATGATCGATTTAACCTCTGATCAAAAAGATAGACCTTGGTTCTATTTCATCTCTTCAACAAGTTTAGTAATAAGCATAACGGCCCTATTGTTCCGATGGAGAGAAGAACCTATAATTAGCTTTTCGGGAAATTTCCAAACGAACAATTTCAACGAAATCTTTCAATTTCTTATTTTATTATGTTCAACTTTATGTATTCCTCTATCAGTAGAGTACATTGAATGTACAGAAATGGCAGCAGTCTCCTCCGACTCCGCCCACTGATGCCCCAGACACCAATGCTCCCTCCGCCCTTGCCTCGTCTGCGGTCACCCCCACCGCCTCTGCAGTCTGCACCGACCGGCGCTCCCACCGGCGCCCCCGCGAGCTCCTCTGCATTCACCACCACCGGTGCTCCCATCGCGGGGATGAAGGAAGAGATGGGGAAGAAAGAAGAGGAATAATGGAGGAAGATAGAACTGACATGTGGGTCCCACGTCCAGGAGGGTGACGGAAAACGTGATGGAGTGGCACGGTTCAAAATTTTCAAATTTCTAGTGGCGATAAGGGATCGCCCAGGATCGGGTGGAAGGTTGGAGAAGCCAGTCTTCAGGTCCATATTTTTGGAAAAACTGTGATGTCTGGAGTTGGTAATGATATAGGTCCTAGAAATTTGGCTGGCTATGTTACTTATAACCGCAGAACGAGCAATGAATCCCCAACGACAAACGAACGTGCAACAATTCCTGCACCCGCAACTCCATCCTGCAAGTTCAGTGCTCCATCAGTGTTCAGTTTCATCCATCCCAAAGCAGGTCGAGCCCACTTCTGAACCACAGCCGATGGCCTGAACGACACCTTCTGCAGACTCTACTGGTGGTATTCCCCGAGGCGACCTATATCCCCACCAATGTGATCTCCATTACAGATGGACAAATCTGTTTGGAAACAGAGCTCTTTTATCGCGGAATTAGACCTGCTATTAACGTTGGCTTATCCGTCAGTCGCGTCGGGTCTGCCGCTCAGTTGAAAGCTATGAAACAAGTCTGCGGTAGTTCAAAACTGGGTACCTCAAAGTTTATAGTTCTAAGCTGAAGAAATAGCCTGAGTCAACTTATCTTCTTTACAACCTCCAAACAAACAGAAAGACTAACGCCGAAAGATATGTTTTGAAGAGAGCTCCATCGGGTTGAAGCCGAATTGCAGAGAATCAAGATCTTCTACCTTTGCGGAGGGACTTGAATTATTACTTCTATTTACTTGATTTGCTGGGGAAGAAAATCATTAAAATACCACTAAGGCCGGGCAAGTGCAAGTCCCGATAACGGGAAGAAATGCCTACCAAGTGAAAGAAAGAGATCGCAATGGTCTAAGATATAGTCAGTGAACAATAACTCAGGGTAGCCGATATGCTGAATAGTAGTGGTATTTTTTCTAATTGTCATATTTGCAGTGGCATAGATCCAATTAACCCTTACTTCTTTCGTTGATGCTACAGTTATTCCCATCCATTCTTTTAGTTGCCAACTAGACATTGTTATCTTTTTTAAATGAATTATTTATGAGATTTTGTCATCTTGTAATACATATGTAATGTCTTCTGGTAGTGTAAGTTGGAAAAATTAGTGGCATATATGAGAATGGACATTCATTAGTGGCAAAACCAAACTTTCCCCTAATATGTCCGAAGTCTAAAAGGGATCAAATTTATTTGATGGTTTGTTTCAGATCTCAAGTGCTTTTGTACACTGCTTGATCTATATTTGCTGTGTACTGCATTAATGTCCTATGATATTAGGGAGTGATTTCTTTAGTGCTTTTGCAACAGTACTGACTTGGACACCGGGTGTTGCAACAGAAAACAAATTGAATTTATAGCTTATTTAATCAATTAATAAGCATTTATTTAGTTCTAGTAATTTTTCTTATTGAACGAGTAGGTGATTTTTAAAATTTGGGGGAGCCAATAGTGAAATGGAGGACATGTTGAAAAGTGGTGTAAATAGTATAAATTGTGGGCCCCCAGATGTCAGTAGTAGGGGTGGTGTGGGGATGGACACTGCGACTACTAACATCATTATTTTAGAAAGATTGTTAAAAATATAACTAAAAATATATGTGCTCAGACTGTTGCCAAATAACCAGCCTTTTACACATGCTCAGGTTTTGGCATAAGGACATGCACACATTCTTTGGTCAAATTATACTTATCCTGAGTTTCTGAATACACAAGAACTTATTCTTGAATAGGACTTCCTTTTTTTTTTAAATATCCTTGCTGATATTATCATCCTAGCATTGGAAGTTGTCATGACCAAGCTGCACATATGAGCTTTTTCTCTGACTGCTCTCAAGTTCAGCTCCTGCTATTCACAGCAATCAACCAACAAATTAAATAGCAAGTCTTACAAAAAACTCCCACCAAAACAACCAAGCTGGTCTCTTATAAACTGAAGGAAAATCAAGAAAATAAGCACCACTCTTGATTCCAGGAAGCCAAAAACCAGAAATTTCCTCAAGAATAAGCACCACTCTTGATTCCAGGAAGGTGACTTGCCGATGTCCTCCAAAACAACCAAGCTAGTCTTTTATAGGGCTTGTTTGGTACAGTCCAACTCCTACATTTAGCTCCATGAGTTGGGTCTAGGGTGGAGTTGTGGAGCTACCTAAACCCAGCTCCACAACTGTAGTTTATTTTGTGAGAGAGCTCCACCCAGCTCCACTCCCATTTTTAGTGGAGTTGAAACTATTTGGCTGAGCTCCAGCTCTAGGAGGGGTGGAGCTGGAGCTGGAGTTGTGCCAAACAGGCCCATAGTCTGCATGGTCTTTTTGGCAGCTGCTAAAAGGTGTTCTGTGTTATGTTAGTTCCAAACCATGGTGTTTAAATGAAAAGTCCACTAAACCTGGTTCTTGTTATTGCATTAGCCCCTAAAAATGGTGCTTCTGCTTTCTGAAATTTCAACATGTCAAATTGTACCTAAGCAAAGGGATTTCATTGAACTTGATATTGATTTGCCTACAAATAATATGATTTTTACGATATAAGGTTGTCGTCGAAAAGAAACAACGGGATAGGTTCTAGCATCATCATATCATTCAGACTGCCACACTATATTTGGGTTAGTGATGATAATATCCTATTGATCGGCTTTTGCATTTTTCTAGCGTCACTGATTGCCTAGAAGGCCACGTCTTCCCTGCTCTAGTGCTTAGGCTGAAACCTTTATTCTATGGCAGCACTTGTGTCATTTGGACTACTAGCGATCCATCTAGGCTTGAGCAATTGAAGGAAATTGCTGTTGGTGCATTGTTTGTAATGTCTAAGTCAAGAGTTTACTATTGATCTCAATATGTGCCATCCAAGCTTGATGTTGCAGATTTCATCACCAAAGCTTGGGCTTGAGAACATCTCTTCAATTACTCTAACTCAATGCCTTAGGTCTTCCTATCTCCAAACTCACATGCATGTAGGCCCATAGTAATAAGCTCCAGACTTCTTCAAAAAGGGAAACTCTGTAAAGAACCAACCTTTTCTGAATGTTATGTTTTTGCATTCATGTATTCACCTAGATCAAGTAACCCTTGGATTCATATATTTGATATTTATTTTATGTTATTATTTCTTTCAGGAAGACTTCTGCGTGGTGCACAACCCGAATTGATGGACACTCTAATCCAGTATTCGAAGGATGGCGATGATAACAGGTTACTTGCATTAATGAGTGAAAATACATTCTTGATGGAAGATGAGGAAATAGAGGACTTGCCTTGCAATGAAGAAGAGGTGCATCTTATTTCTTGTCCCTCAACTTTAGACCTGTTTATTTTTGTGCCTCAGTTCCAAAACCAGCTAAATTTCGTCCCTCAAATCTGAAAACCAAGAAAAACATGTCCGTCTAACCAATAAACCTTGTTTTGTATCACATGAGTCCACCTTGGATCCTACTTATATGGTTAACCTAACTCACTGTTTCTTGCTCGTTCCTCTTTCTTGCTCTTGCTATCTTCAGCAAGCATCCTGTTCTTCCTTGCCCAAGTGACCAGTTAGGACGCCCAGATCTAGCCATGGCAGGCCCAGATTGTGTGGTCCCACTATGTCCAGGCAAGCTCACTCTAGGAAGTTGGACAGGACTTCAACAATCTCCTCATTCTTTGTGATGCGCATTTCACATCGTTTCAGCTGAACCGGACCCAAAATAAAATCCATACAATACTGATGCGACCATGCCACCCTGACACCGATAGGATGGATTCCATAGGAAACCTGATAATTTGATGGCACTGTGCAGTAGGAGGATCTCCAAGCGGTTTTGGTTTGCCTTGTATGCAGCATTGCACAGCAGTTCTGCTCTATCTGTGCCACCTGATCTTGTAGGTTCTCCAATTGCAGGGAAGCGATCGTCACTTTAGAGCAGCATCGCGTCCTATTGTGGTTAAGGCATGTGACAAGTGTCACAGGTCTTGCTTCTATCAGCTGTATGAATTGAGTAGCAGGGCACATCTCCTTGGTATGGATGATGTCCCTTTTAGTGGCGTATTGGCCAACTAGATTAAGAACAGCAGAAAGAACACTGAGAAGGAAAAGGAGGCTGACTGATAGGATTCCATTGCTGTCCTAGAAACACAAGAGCATAGTTAGATACTCCCTCAGTCCCATTTTAAGCGCAGCTGTAGGTTTTTGTATTCAACATTTGACCGTCCGTTTTATTTGAAATTATTTTATGATTAGTAATTTTATTGTTATTAGATGATAAAGTATGAATAGTACTTTATGTAGGACTTTTTTTAAAAAAAAGTTCATAAAATTTTCAAATAAATAGATGATCAAACGTTAGACACTTGGATACATAAACTCATGACTGCACTTAAAATGGGACAAAAATGGGACAGAGGGAGTACTAGTAGATGCCTAATTGGTTAAAACCAAGTGAGTTTTTTTGAGGAAGCAGGGACATTCTCTTTGGTTTTGGTATTGGGATGAGTTTTATCCTTTTTTATAGTTCTGGACAAAAAACAAGACCACTTCGAAAGTGGAGCGACTAGAAATAGACTTCTTTGCTATAGTTTAATATTACATGCTAACGATTTGAAATTTTGAACAGGGTGACAAAGAGCATATTGAAATTGCAGATAGATGGTTTGAGGGCCTCCTTTCCAAAGACATTTCAGTTACTAATGAAATTTATGCGATACATAATGTTGAGTTTGATCGTCAGGTATTCTCTACACTTGTTTAAACTTTTCATTGTACTATTTTACTCGACATATAAGATATTTGCTTAGTCAACAGTTAGATAAGATGGTGATGATCCGTTTGGCATCACATAATACTCTTGTATAATCACCTTAATAGTGTTTTTTTTAGAATACATGCATAATTGGTGTTTTCTAAATAAACTAAAATTTTGCCTGTAATATCTAGAAAAGCTTCACTGGAATGTAGCAAGTTGGAACCCCATTGTAGGGCAGCCATAGGTCTGCTAGTTAGTGGAAGGCAATTGCATAGTTGTAAAGGAGATCAGTAAACTGAATTAGTACCAACACAAACTGACTAAAATAAAAGAGATCAGGCCATCCTTTTTGTTTTCTTTTTCTGAATTGCCTAATTGATAATTTTTCAGTGCCTGCTAATAATAAGCCACTGCATCTTAGATTTCTCTTCAGTACATATTAAACCTTAAGAGCAATCAAGGAGCAGGTGGTTATATATGTAATGTTTCACGGCTGTGTTAATAAGCCCTATTGCATTCATGTTAAACATTGAATGCTCAACCTTATATATGTACCATCCAAACTATATACTCTATCTGTCCCAAAATATAAGGGATTCTAGATGGATGTGACACATTCTAACACTACAAATCTGTACAGCGAACCTGTCCAGATTCATAGTACTAGGATATGTCACATCAACCCAAAATCCCTTATATTTTGGAGAATGGAGGGAGTATATATTAGTTGAAGAAATTAACTGATGTTATGTTAACAGGAACTGCGGAAGCTCGTGAGGACAGTCCACATGGTCCAAGATAATATAGAAAATGAACATGAAGAGGAATCTACCATGAAGCTTTTGGGAGCAAAGAAACAACTTTTGTGCTTCCTTCGCTCCATTGCTAAGGAGGCATACTTCAAATCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016010