BGIOSGA016020

From RiceWiki
Revision as of 04:23, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016020| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016020, complete gene.| tag = OsI_151...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016020

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016020, complete gene.

LocusTag

OsI_15122

Ensembl Transcript ID

BGIOSGA016020-TA

Ensembl Protein ID

BGIOSGA016020-PA

Length

1424

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:8525790..8527213

Sequence Coding Region

8525790..8526230,8526598..8526696,8526848..8526970,8527052..8527213

Genome Context

<gbrowseImage1> name=IndicaChromosome04:8525790..8527213 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:8525790..8527213 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGAGAAGGAGGGGGCGATGGCTGCTCGATCTACGCGGCCGGATCCACGGACACACTATACAGGTACACAAGAACATCAAGAATGCATTAGCAGCACCAACCATCACGTATCTTCAGCAACAGCAAGCAAGCATCTTCGGAAGTGGATCTGTGGAGGGACAAGAGAATACAGCCGAGTCGGGAGATGCACGGGCGCAGTCGGCACTCGTGCGGGGAAGCCGGGGATGCGCCGGCGACGGTCACCTCCTCGGTCCAGGTCTCCGTCGGGGGATCAAGATGAGGGAGCGCCGTAGCGGTGCTGCGGTGGGTGCGCTAGATGCATCCGTGTATGCCGCTATGGCTGGGAGTGTGGAAGTTGTCTTCCCAAACGAGAGGCGATGTAGAAAGCAATGGTGGTGCGTTGGTGACTTGGGTAGAGAGGATAACAATAGAAAGAGACCTTTGCCTGCCGTAGCGCACGACATGGCAGGACAATCTTCACATGAACACGATGTAATCGTTGGGGATCGTGGAGCCGATGGCAAGCAGAGAACGCAGATCTCCGAGTTTATGACCATGGAAGAAGATGTTGCCGGCGCTATCGATGCCAACGCTAATGGCGATGACAACACACTCTGTCGCATAGTACCTGAAGAGATGGCAGATAAAGCACCAAATCAGGCCAATGATAAAGTTGCACAAACTTTGATCTTGCCTCAAGTTGGAATGGCTTTTGATTCAAAGCAGAAAGCGTATGATATGTACAACACCTATGCCGGGAAGATTGGGTTCAGTATTAGAAAGAGCCAAGCAAAGCACCAAGTCGATGGAACTATATACTAG</cdnaseq>

Protein Sequence

<aaseq>MRRRRGRWLLDLRGRIHGHTIQVHKNIKNALAAPTITYLQQQQASIFGSGSVEGQENTAESGDARAQSALVRGSRGCAGDGHLLGPGLRRGIKMRERRSGAAVGALDASVYAAMAGSVEVVFPNERRCRKQWWCVGDLGREDNNRKRPLPAVAHDMAGQSSHEHDVIVGDRGADGKQRTQISEFMTMEEDVAGAIDANANGDDNTLCRIVPEEMADKAPNQANDKVAQTLILPQVGMAFDSKQKAYDMYNTYAGKIGFSIRKSQAKHQVDGTIY</aaseq>

Gene Sequence

<dnaseqindica>1..441#809..907#1059..1181#1263..1424#ATGAGGAGAAGGAGGGGGCGATGGCTGCTCGATCTACGCGGCCGGATCCACGGACACACTATACAGGTACACAAGAACATCAAGAATGCATTAGCAGCACCAACCATCACGTATCTTCAGCAACAGCAAGCAAGCATCTTCGGAAGTGGATCTGTGGAGGGACAAGAGAATACAGCCGAGTCGGGAGATGCACGGGCGCAGTCGGCACTCGTGCGGGGAAGCCGGGGATGCGCCGGCGACGGTCACCTCCTCGGTCCAGGTCTCCGTCGGGGGATCAAGATGAGGGAGCGCCGTAGCGGTGCTGCGGTGGGTGCGCTAGATGCATCCGTGTATGCCGCTATGGCTGGGAGTGTGGAAGTTGTCTTCCCAAACGAGAGGCGATGTAGAAAGCAATGGTGGTGCGTTGGTGACTTGGGTAGAGAGGATAACAATAGAAAGAGAGTACGTAATGAAACGTGGAATGCATGCAGGATCCATCGCACTGAGTTAGCACTCTTTTTTTGGAAAAAAAAATCTGGTGCAGACCGGATGCAAACAGCAGTCCGTGCAGCCCCGACACGGATGCATGACGCGTGGATGAGGCGCTCATCCGACGGCCGGCCCACACAAGCGAGTCCGCATCCTGCATGGCTCGACTCAGGTCGTTCTCCCTCAGCTCGACTTGCGCGGCTCAGGATTACATTGGGTAGGGCGTGATTAGAGGCGGACGATTAGAGCGAAACAGATTCGCTACATGGCAGGACGAGGAGTCCAGCAGAAGAGCACAGGCGCCGCCGGGCTTCTGGTGCCGTCGTCTCATCTGGTGCAGCCTTTGCCTGCCGTAGCGCACGACATGGCAGGACAATCTTCACATGAACACGATGTAATCGTTGGGGATCGTGGAGCCGATGGCAAGCAGAGAACGCAGGTACATTGCCTAGCTAATTGACTCATGCTTTTTCATCAGTACATGCATGCATGATCGTGAGTGATCGTCTTACATGCCCTCATCGCAAATACTGATGTGTGGCTAATACGTACTGATGTGTGATCATATCGTGCATGATCATCTTGCACAGATCTCCGAGTTTATGACCATGGAAGAAGATGTTGCCGGCGCTATCGATGCCAACGCTAATGGCGATGACAACACACTCTGTCGCATAGTACCTGAAGAGATGGCAGATAAAGCACCAAATCAGGTAACGATAATTTAATAGCAAATTCGATGGAAAACAGAATATCTCATACTGTGGTAATATAACTCATTTATTGTACAACAGGCCAATGATAAAGTTGCACAAACTTTGATCTTGCCTCAAGTTGGAATGGCTTTTGATTCAAAGCAGAAAGCGTATGATATGTACAACACCTATGCCGGGAAGATTGGGTTCAGTATTAGAAAGAGCCAAGCAAAGCACCAAGTCGATGGAACTATATACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016020