Os08g0102700

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Revision as of 12:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0102700| Description = Harpin-induced 1 domain containing protein| Version = NM_001067302.1 GI:115474340 GeneID:4344425| Length = 1519 bp| ...")
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Gene Name

Os08g0102700

Description

Harpin-induced 1 domain containing protein

Version

NM_001067302.1 GI:115474340 GeneID:4344425

Length

1519 bp

Definition

Oryza sativa Japonica Group Os08g0102700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:150934..152452

Sequence Coding Region

151425..152108

Expression

GEO Profiles:Os08g0102700

Genome Context

<gbrowseImage1> name=NC_008401:150934..152452 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:150934..152452 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgatcaagcactgcgagcaacacaaggattgcgagcggcagcgcctgtaccggcgttgctgcgcggccatcttcggcatccttctcctcctcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacctcaacgacctcaccgtcgtctgcctcaacgtcaccaccggtggttcctacgccggcgccaccgcctcctccggctacttctccttcctcaccgtcaccatgcagaccaccctcgccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgccgagtacaagggcctccgcatcaccgtgccgacgtcgctgccgccggtgtaccagggccacccggacctcaccgtctggtcccctttcctctccggcaacaacgtccagctcccgccctacctcgccgtctccatcacccaggacgagaccgccggctacctgctcgtcaccatccgcgtcgacggctggatccgctacaaggccggcgccttcatcaccggacactaccacctccgcgtcaggtgccccgccctgctcatcgtcaacgacggccggggaagctacggctccaactccggcggcggcaacggctacttcaggttccagcgagccgccgcctgcgtcgtcgacgtctga</cdnaseq>

Protein Sequence

<aaseq>MSIKHCEQHKDCERQRLYRRCCAAIFGILLLLLLIVLIVWLILR PTKPRFYLNDLTVVCLNVTTGGSYAGATASSGYFSFLTVTMQTTLAARNGNERVGIYY DRADVYAEYKGLRITVPTSLPPVYQGHPDLTVWSPFLSGNNVQLPPYLAVSITQDETA GYLLVTIRVDGWIRYKAGAFITGHYHLRVRCPALLIVNDGRGSYGSNSGGGNGYFRFQ RAAACVVDV</aaseq>

Gene Sequence

<dnaseqindica>345..1028#atcttcttcttcttcttcttcacttacttgtccatcttctttcttcttcttctccacttacttgtccatcttcttctcctcctcctacctagcttattgttgttggtagctagcgagctcactcctcactcactctctgcccttcctttcctaccatacctctcaattattcctttcctaccatacccctcaattattagtaagatcgattattagtcccagttagttgctagctacaaggaattgaagcaacaagttgtagcagattgagagagagttgggaagaattacacaagaaatttagagaaatagtactagctagctagcaagaatatagatatataatgtcgatcaagcactgcgagcaacacaaggattgcgagcggcagcgcctgtaccggcgttgctgcgcggccatcttcggcatccttctcctcctcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacctcaacgacctcaccgtcgtctgcctcaacgtcaccaccggtggttcctacgccggcgccaccgcctcctccggctacttctccttcctcaccgtcaccatgcagaccaccctcgccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgccgagtacaagggcctccgcatcaccgtgccgacgtcgctgccgccggtgtaccagggccacccggacctcaccgtctggtcccctttcctctccggcaacaacgtccagctcccgccctacctcgccgtctccatcacccaggacgagaccgccggctacctgctcgtcaccatccgcgtcgacggctggatccgctacaaggccggcgccttcatcaccggacactaccacctccgcgtcaggtgccccgccctgctcatcgtcaacgacggccggggaagctacggctccaactccggcggcggcaacggctacttcaggttccagcgagccgccgcctgcgtcgtcgacgtctgatccatccatccatctcctcatcctcctctcatgcatccaacaaatcatatcatccttaattaattctcctccttccatatataattgcttgcttaattgatcgatctacattctacaagcacagccctgatgaagaagctatataattaaaagctcagctcaactgatcgagtgaggatcggagtaatcttgcatatatgcctgccaccagtggttttatgtatttacagtacgaattaatttgacctttttcttacttaattttcatgcctgtgttttttttggtactacgtacagtgccatgcttgtggctagctgcatggttcaggtgtacagctacttgtagtaataattcgcatatagagaggggataattaagcaattgctacaatcttgtaattactactagaatatataataattgtacttatcttcacatgcatactacatagttgcaacattgtaatcaattaatgttctgttcatttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0102700, RefSeq:Os08g0102700