Os08g0103000

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Revision as of 12:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0103000| Description = Amino acid-binding ACT domain containing protein| Version = NM_001067304.1 GI:115474344 GeneID:4344427| Length = 726...")
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Gene Name

Os08g0103000

Description

Amino acid-binding ACT domain containing protein

Version

NM_001067304.1 GI:115474344 GeneID:4344427

Length

7268 bp

Definition

Oryza sativa Japonica Group Os08g0103000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:171122..178389

Sequence Coding Region

174485..174490,174564..174675,174976..175121,175312..175362,175518..175628
,175725..175794,177843..177919

Expression

GEO Profiles:Os08g0103000

Genome Context

<gbrowseImage1> name=NC_008401:171122..178389 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:171122..178389 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagacctcagcttggagagaagaagaagaaacgacacaggagacaacaccggctccatgtccatctcctctaggtaccccaaaactaagcttattcatgagattatcttctcttccctggacaagcccaagcttcttagcaggctcactctactcttgtctgaggttggactgaatattcgtgaagcccatgtttactccacaactgatggcttctgtttggacgtttttgttgttgatggctgggacacagaggagacagatgatttgatcatcaagattaaggaggcattgtcgcacaaaaatgcatcaccatctaattcaacaaattcttcagcctcgacaaatcagcagaaaatagctgagctacaacagcaggttggagattctgaaattgactggaacttgctaacaacaggggaaaagattgctactggatcttctgctgacttgtatcgaggaacttacaatggtcttgatgttgctgtaaagattctcagagattctcatttcaacaatccgtcagaagttgagttcttacaggaaatacttattctaaggcaatgttaa</cdnaseq>

Protein Sequence

<aaseq>MEDLSLERRRRNDTGDNTGSMSISSRYPKTKLIHEIIFSSLDKP KLLSRLTLLLSEVGLNIREAHVYSTTDGFCLDVFVVDGWDTEETDDLIIKIKEALSHK NASPSNSTNSSASTNQQKIAELQQQVGDSEIDWNLLTTGEKIATGSSADLYRGTYNGL DVAVKILRDSHFNNPSEVEFLQEILILRQC</aaseq>

Gene Sequence

<dnaseqindica>3900..3905#3715..3826#3269..3414#3028..3078#2762..2872#2596..2665#471..547#aaactccaatcggtggtcgccggccggagcctgcaccaccgccacgcacggcggctataaatacgaggcccccgcgggcgcgagcacgcaggggcgcagagggggagatggaaatggaggcggaggattggggggagagctcgtcgccgccacggccacacccagaggcagacatggtgaataaagagaaggaccccgaggagatgaagaggaagctgaaggagcgaatcctggagctggagaaggaggaggtccccctccccgacgacgcctccgccttcgtccaccacctgtcgcgcctccccaaaaggtatctcttcgacctcggcgttgacagggtggacgacgtcctcctccactggaggatcctcacccactgcgcccacccacagaatcgccccgtcttccacgcccgcttccaaaagtccattcctctcccggattccgatttcgatccatgccagaggctcatggaagacctcagcttggagagaagaagaagaaacgacacaggagacaacaccggctccatgtccatctcctctaggttggtacttcctttatttcctcatctttccatttgccttttcactttattattatgtctttatttgtttcaatacactagatgaaccctcgcgttgctgcggaaaactaaggaaacatcatgcatgccataagcacaaaacaaaacccacaatcacatacctttaaataacatagtatttgatagcttgcagaatcatagaataggccaaatatatgttgagcgacctgcaaacaactcaagaataatatgaaataaggtagatatttagctgaacaaacactgaatcagtacattagaggataataaagcatacaaatttctctctaaaacatcacaggatcgtgcaatgtttaaggatatatttgtgttgagaatgagaaaaaatgtatacctgctagctatgcatccattttttcagagctaaaatctatgaataccttttaatatcattttaattaaagacaaatctagttagtggtaaagaaatattgctcgctgagtacctgcagccaagcaagcaaatcatcagatcagattataaagtatatatgagatatatacatcaattagccaatcaaaggtaaaaggattaaagaacaactgttagtaaaaaaaaatgatttccataaagtgaacacaatattattgaataaaggggtgcatagtgataaggatcagtacaccacattctttggtcaagctcacacaaagcaagcactgcaagatctggttaatggtgtccaaacaaaatgatgaaaccaagcagtgcagagaaaagccgtgcaaactgctgataatactgtaaaacacatcaaaaggtctgggcaaagagtttgggttcctgaatgttacagaagaaacaatttgtcaaatcgcagtcaaaagggtgcaaagtgtacatatgcagtacccagtctaacctgattataagcacaatctaataaattggttgtgaaatacttacattaaaaaaggttgtgagatacttgtgcacagatggcactgatcctgttcaaatgttgtcttgcataaatctgaagcaaatcaaacaaaaataccagtacgatatcaatctcgttcatagaaattggtgtggcaaaaattctgcagtagaaacagaggcaacccaaatacataaggcttagtgtagctgcaattttgcatatacatatataagaattaagaaatcttgtcttatatattttgtcgactcctagccttaatagattccatacgatattgtatggataattaagaactgattcgatttttacaaattgtcatgtaactggaagtgaagaaacagcaatattgtactgtcaaaagtaaagcatacctggcatttttccattatcttaatcatggtgatgatgcatatggttgggttggccggtcgcacggggatgatggattaagagtcttagaagctgacgatggtatattttgaggacttaaaaaaggcttaagaagatactcccgactgcttgttgctggcgatggtttcagaaagaggaatcatcccgtgggtagctagtggtaggctggtagtccatcagacaatctggagaagaggaacagacgacgccagcgaggtcaccgaaggggattggtgtgcgcgacgggggtggctgatgtgaaggagcggaacgtacaggcgtgaggagcagcagtgcgagaggaggggaagcggcggcagtgttggccgatgcgccgcacttgtgaagggatgagagcgggcggtggttgcgagtttggggatgagagcgagcagatagggaggccgtcgggatgggctcaattcagttgggctttctcgtgtgcattgtgcaagcaataaccatcaaaccgttgagttttggtccaacggctggcattcattttgatgacgtggatcaaccacaatgcaggaaattgtgtaataactacactaagtggggatcacttatatagatttataggataggataccatatatatcatactcataccttatacaccccaactagtatatagtacttactgcctactgaattcccttcctacaggtaccccaaaactaagcttattcatgagattatcttctcttccctggacaagcccaagcttcttagcagggtaataattcattttccatctcctacttctgctttcctttccatattataattgccaacttacttaccaccaatagttacttaatcttttcaacagctcactctactcttgtctgaggttggactgaatattcgtgaagcccatgtttactccacaactgatggcttctgtttggacgtttttgttgttgatggctgggacacagaggtcactctataaccatgcctgtttctacatccatctataaactctctgtgattaccagctcacatttcacgcacacagataatatcgtttactctttcattatgtgctcttgtatatgcaagtgttgcttgctcattttgcaacttcacatgcaggagacagatgatttgatcatcaagattaaggaggcattgtcgcacaaaaatgtatgatgccctttacactcaacctactttaattcctttccgtttcggtcatcataagtcatccgcatggtttttcgtctcgcttgtttcatgtaaatgcagtaccacgtgcaaagctctagtttcactcacaaggaaattaccgacatttcctaacagacttagattaattattccatgtaatatgtaggcatcaccatctaattcaacaaattcttcagcctcgacaaatcagcagaaaatagctgagctacaacagcaggttggagattctgaaattgactggaacttgctaacaacaggggaaaagattgctactggatcttctgctgacttgtaagaattatttggcacttacagtttgctaacagtctagtatgatcaccatttactatgggaataataatttacaagtttcaattatttgcacttcactgctgatacggtggtgtgccgctctatcctctacagaccataatagtttgctggcttccactgacaaggaaatgttgatgtattaccatgatgccaattgacaaattaccatggatattattaacctagttttggctctgatacacaaaaaccatataacagtattttccagtcgagtctcatctttactctgtttcacaggtatcgaggaacttacaatggtcttgatgttgctgtaaagattctcagagattctcatttcaacaatccgtcagaagttgagttcttacaggaaatacttattctaaggcaagttcttttataaactgctgaaattagcgtgtttcattttattctgacttactcaagatattttcctccaggagtgttaatcatgaaaatgttcttcaattttatggggcatgcacaaggcctcaaaagtattgcattgtaacaggtagcatttatatcttttttttccttaatatttgattggaatcacctccataaccactggtgctgaattgcataaacaatgctgttgttgccacgtgtgcatgtgcgcacataggcttaaagcagaagctagtatttaggtattgacacaaacatacatccattttatagccatctatctgatgttgttcttcaggtagactatttaattttgaagttcccatactatcaagaaaattgtgtaatatatagcaaagaatttttaattatgcatcaaataggtcttagacttgcatagttggagtcagtattcgaatgaatcatgcttcatgtcctgtctggcttactgttactgaactcacatttttgtcttgtggttggttctctttctttcagaatacatgcctggagggaatttatatgactttcttcacaagcaaaataatgttttggacctccttacgattttaaggattgctatcagtatttcaaaggggatgaattatctgcatcagaataacatcattcatagagatctgaagactgcaaacctgctcatgggctatcatcaagtatgcgtactgaatattcttctcagttcccattttcttcttctttctgatatgtggtagtgatatccaaaaattagaaaaatatatcaaggtgaccggtactattacagcaaatcatttgttatccacttttcaatcatatgacactgctttgggatgggatatttttttcttcgaattatgtaaagattttcagtccacatcttgcagatgggcaacggcatttcaaagaggattttttacaacattttatagctcaaaggggagatttcatttataaaaaatcgagttgcttaagaactttggcttcaaatagtccttgtaatttgtcagtattaattttgtttttcagttttgaactgtgaaatttcatgcctcatgtgaaaaaccacattatggtcctgaagatgtaattctgttcctttaattgaaatggactaatctcccagatttgtattgactatatctgctactggtaataggttgtgaagatcgcagactttggtgtggctcgacaaggaaatcaagagggacaaatgactgctgaaactggaacctatagatggatggcacccgaggtacagttgaccatttaatttgtgcccattgagattcatacttcttttttgttgaaagaaataacttttaggaagcttctgtgtccactataccatcctcagttttcctagtttccattgttatctgatgtgtgaaactatcggtaaaccttttgcttttgcgtggtcctttgtttgctcttgtgagttgtgaagcgtaggctccttgcatcacatttttttctggaatgggtcatgcctcctcttcactaaactctgcctttcttttaagaattgcttggtgttgaaatttttctttcagatttttgtataaccaatttgtgagttctgagtaacctaagttttgaaaatctgctgctttgtatgagatacctttttagataaatccaattcaaagtcaagatttgaaactagaaacaccaatcatatactactagataatgtggagtggataatgctgcacaaactgaaatagggcatcacttctccaacttactgttgagcgatgaaccacccatcattaagccatccatgtgagaggtgtaagttggacttcttaagttcccccatgcaggcatcactgcaacagtgttgcattatcaactttgaaagattttgggtcaatcagtgtccttggaatctaagatgcctttggaactttacctgttatgtgaaattgattgtattgatgatttgatagtgacaaataagatccagttgtaggaaaaggttggatacattgtttaccactctggaattatctttgcgtgagatgagaagttctgaccagagttttcattgcaacagtttttccattcttttggatgagaatctcataggtgctgcttgtctcaacagatcattaaccataagccttatgataacaaagcagatgtgttcagctttgctattgttctgtgggagctggtaactttgaaggtttggccctggtgtacattctgcttgagcttaattctgagttgtttgaacataccatattgtgattattaacggtaacactgtaatttttaattctgctataggtcccatacgataacatgacgcccttgcaggctgcactaggagtaaggcaggtatgtatctgattctggtcatctcgagaaaatattgctttcgttgtggtgctacctccatgtcatccactgtaaaagattccagaaaatcccaaattttttggagttgtaagggatgctccttatccatgtaaatcacaagatcaaacagaaccaaagtaccacacttcaaggatattagaagatgacagaaatgaacatgaataatgacaaactagcaaattattttgtctctgtgtttctttaaacagaaatccacattgactcattttcccacacaccctgcttagggatttcgcttggagattccctcaagtgtgaacccgagattgtcaaaactgattcagcggtgttgggacgaagatcctgatgtccggcctgtttttgcagagattgtcatcgaacttgaagacatcttacagcatgcccaggtaagaatgattttttccccttttcattcatataacacagagttatcacattttgttagtcttgaggagttgaattaaagtatcagaatgtttcttcagtggcttgataaatgtgcagtatgattgctcagtagcataacctgggagtaattcaattgtgtatttgtatgtccagtccttggtagtatgatggacttgggttgttgttctgaacattctgtcttaatcgagtatgttttttgagcaggcaaacagcaggggagccagtcggcgttctagagctaagatacagaagaaatcacctcgatagagtatcataccaaaggttatcttgctcttttgttttcattctttttggtaaaacaggctaacttgtagctgctttcttagcaactccacagaatgtgtaatttctttaggtctccttcaaatgaaggtatatatgcgtatatatatgtacttgccgatttgacggcagtaacagaatgactgcgaattcactgttggtgtcatctgtggactgattagaagatgaccattgtttgcttcccatcctcgatggcaaagccgaccttagaacacttgtacagctgtagttgttgcacctaagtactagtacttcgt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0103000, RefSeq:Os08g0103000