BGIOSGA016079

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Revision as of 04:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016079| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016079, complete gene.| tag = OS04G02...")
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Gene Name

BGIOSGA016079

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016079, complete gene.

LocusTag

OS04G0289750

Ensembl Transcript ID

BGIOSGA016079-TA

Ensembl Protein ID

BGIOSGA016079-PA

Length

5285

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:10408231..10413515

Sequence Coding Region

10408231..10408698,10410000..10410532,10410621..10410746,10411132..10411231,10411387..10411406
,10411542..10411644,10411720..10411858,10411955..10412169,10412555..10412659
,10413498..10413515

Genome Context

<gbrowseImage1> name=IndicaChromosome04:10408231..10413515 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:10408231..10413515 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCGTCATCAAATCCATCAAATCTTCCCTGCTCTAGTGATGGTGTATGCATGTTATGCAAGGTGCTTACAACAGAGGTAGAGCAGCTGCGTTGTAGCACCTGTGCTACGCCATGGCATACTCCCTGCCTCTCCAGCATACCGCCCCTTACAGATGTGGCCCACTGGGTCTGTCCAGATTGCTCCGGTGATGTCACAGCCAGCTACCCGCCATCTGATGTTGTTCGTCCGGAGAGCAGCCTCATCGCTGCGATTCGTGTGATTGAGGCTGATCCGGTGCTGTCCATCCAAGAGAAGGCTCGTCGTCGCCAGGAACTTCTTGGCCATGCCGGTGATGCAGGGGCTGCAATAACTGAAGCTGTTGGGGAAAACGTAGAGGACAGTGAGAGCAACAATCCTTTGTCTATGCTGAACAAGAACATCAACTGCTCATTTTGTATGCTGCTTCCAGAGCGACCTGTCACTACACCATGTGGCCACAACTTCTGCCTGAAATGCTTCCGAAGGTGGATTGAAAATGGTAAAAGAGCTTGTGTGATCTGCCGAGCACCTATTACACAAAAAGTAGCACAAGATCTAAGAATTAACTTGGCACTAGTCCAAGCTATCCGCATGGCCAAGGCTGCAAACAATGCTAGCACAACTGGTGAAACAACGGTTTATCATTATAAAGAAAATGAAGATAAACCTGACAGAGCTTTCACTACTGAAAGAGCAAAGAGAGCTGGAATGGCAAATGCTTCAAGTGGACAAATATTTGTGACTATTGCACCAGACTATTTTGGTCCAATTCTTGAAGATCATGACCCAAGGAGGAACCGCGGTGTTCGAGTCGGGGACCATTGGAAAGATAGAATGGAAGGTAGACAGTGGGGTGCTCATTTCCCTCATATTGCTGGGATTGCCGGCCAATCTACACATGGGGCTCAATCAGTTGCCCTCTCAGGAGGTTATTTAGATGATGAAGATCATGGAGAGTGGTTCCTCTATACTGGAAGTGGAGGAAGGGATCTAAGTGGAAACAAGCGAACAAGCAAGGAGCAGTCTTTTGATCAGAAGTTTGAGAAGCTGAATGCTGCATTACGTGTTAGCTGCTTAAATGGCTATCCCGTGAGAGTTGTACGGTCTTTTAAAGAGAAGCGCTCACCATATGCTCCAGAGTCTGGTGTTAGGTATGATGGAATCTATAGGATTGAGAAATGCTGGAGGAAAACTGGAGTTCAGGGTACATTCAAAGTGTGCAGTGATGAACATGGAGACCATCCAAGGCCATTACCAGATATCGAAGAGCTGAAAAATGCAATTGATATTACTGAGAGGAAAGGAAACCCAGCATGGGATTTTGATGCAACAGATGGATGGAAGTGGATGATTACTCCACCCATCAGCAGGAAGGCTGTCGTAACTGGAGATCCTAGAGGCAAGAAAATGCAAGGAGCAGCAAGGCATACAAATAACTTGTCAATGAGAGAAAGGCTGTTGAAAGAATTCAGATGCTCCATATGTAGGAACGTGATGGAAGAGCCAGTGACAACACCGTGTGCTCACAACTTCTGCAAGAAATGCCTGCTTGGGTCATATGATAATCTTTCCCTTACAGAGGAGAGAAGCCGTGGTGGTCGGACCCTCCGGGCACGAAAGATTGTTAAAAAGTGCCCTTCTTGTCCAAGTGATATCGCTGATTTCGTACAGAATCCTCAGTTTCTTTCACGGTATAATGCAGTGGTGGATTTACCACCCGGCTTGGGCAGGCAGTTGTCCAGGCTATATGAACGCAAACTATCAAACTGGACTGATTTCTCTACGGCTATTCATGCCACCTAG</cdnaseq>

Protein Sequence

<aaseq>MASSSNPSNLPCSSDGVCMLCKVLTTEVEQLRCSTCATPWHTPCLSSIPPLTDVAHWVCPDCSGDVTASYPPSDVVRPESSLIAAIRVIEADPVLSIQEKARRRQELLGHAGDAGAAITEAVGENVEDSESNNPLSMLNKNINCSFCMLLPERPVTTPCGHNFCLKCFRRWIENGKRACVICRAPITQKVAQDLRINLALVQAIRMAKAANNASTTGETTVYHYKENEDKPDRAFTTERAKRAGMANASSGQIFVTIAPDYFGPILEDHDPRRNRGVRVGDHWKDRMEGRQWGAHFPHIAGIAGQSTHGAQSVALSGGYLDDEDHGEWFLYTGSGGRDLSGNKRTSKEQSFDQKFEKLNAALRVSCLNGYPVRVVRSFKEKRSPYAPESGVRYDGIYRIEKCWRKTGVQGTFKVCSDEHGDHPRPLPDIEELKNAIDITERKGNPAWDFDATDGWKWMITPPISRKAVVTGDPRGKKMQGAARHTNNLSMRERLLKEFRCSICRNVMEEPVTTPCAHNFCKKCLLGSYDNLSLTEERSRGGRTLRARKIVKKCPSCPSDIADFVQNPQFLSRYNAVVDLPPGLGRQLSRLYERKLSNWTDFSTAIHAT</aaseq>

Gene Sequence

<dnaseqindica>1..468#1770..2302#2391..2516#2902..3001#3157..3176#3312..3414#3490..3628#3725..3939#4325..4429#5268..5285#ATGGCTTCGTCATCAAATCCATCAAATCTTCCCTGCTCTAGTGATGGTGTATGCATGTTATGCAAGGTGCTTACAACAGAGGTAGAGCAGCTGCGTTGTAGCACCTGTGCTACGCCATGGCATACTCCCTGCCTCTCCAGCATACCGCCCCTTACAGATGTGGCCCACTGGGTCTGTCCAGATTGCTCCGGTGATGTCACAGCCAGCTACCCGCCATCTGATGTTGTTCGTCCGGAGAGCAGCCTCATCGCTGCGATTCGTGTGATTGAGGCTGATCCGGTGCTGTCCATCCAAGAGAAGGCTCGTCGTCGCCAGGAACTTCTTGGCCATGCCGGTGATGCAGGGGCTGCAATAACTGAAGCTGTTGGGGAAAACGTAGAGGACAGTGAGAGCAACAATCCTTTGTCTATGCTGAACAAGAACATCAACTGCTCATTTTGTATGCTGCTTCCAGAGCGACCTGTCACTGTAAGTATGATTGCTCTTTTGCCAACCCTGTCAACCTTTGCTTTGGAACAGCCTAGAAAAATATAGAAATGTTTCCATGAGGCACTACATGTCATAATATGTAAGCTCATAAAGTGTAAGTTTGTACCATTACTTAGATCTCAGATCACACTGAAGATAGGCTCCTATTAGCACACAAATAAATTATGATTAAGTTGTTCTGATTTTATTTGAATTGATCTACAATTGCTGTACTTCTACTGCAAATTACATCAAGTATGATATATACATGAAAATACAGGGAGCTACTGGATTGTTGGTTTCTCCATCTATTTAGCCTGTTTTACTGCTCTGAGATATGCCTCTGTGGATGCAATTGATCTCCTTTGACTTTTGCCAGTATCTCCTCTTCCTTCTCGACAGTTGTGTCCTCTCTTCAGCAGCACCCACCTTCCCGATGTTTCTTGCCAACTTTATAATTTTCACCTTGTTAAGAACCTTTCTCTCTTGATTATCAGGCTATAGGATCTTCCAGTTAGGAAAGAGCTATGTATAGTTTTCTTCTATAGGGACAGTGATCATTACATGCATGGCATCTCGTTGCTTATATGCTAGCCCTCCTCCTATGAGCTTAATTTATGTTGCCATCGATCTGTCTCAACCTGGAAAATTTACATTACAAAAATGTCATGCACATATTCGTAGCCAAAGTCACATATGATCGCCTCCTATTGCCTTGCATAGCTAATAGTTCTGCATTCAGTATAACTTTCTAATACAATACCTATTGCCATTTGCACCCACTATGAACCATGCACAACTAAGTCGAATCAACCATGCACATATGTGTTTTGGATATTTGTATTATCTCGACAATTTTTAATCTGCTCCTTGTTAGCAAGAACGCCTCGTTTCATAGCATATGCATTTGTCTGGTACCATAATTTATCACAGTGAAATGACTAATGATCTCACAAAAAGTGGTTTTGTTCATGTTACTTTTTATCTCCGTCCTTTATTTAAATATTGAAATTTGTGGAAGCTTCATTTATTGTTTACAAAGGATATATTTCCATGGACAGACTAGTCGGCTGAGACTCATTATTATCTGGCTAGTTCATTTTCATGTTATTTTTCATGTAACTACATTATTATCCTATGAAGATAATGCTAATTAACCGAATACATAGGAATTTGAACACCATTTATACCTGTGTTTCAGAATATTTTACTTTGCTGAACATCAAATTCCATTATTATAGCATCCATGTCCATCAATTGTCATCACATAATATTTTCCTTTGCTTACATGTATTGTGCAGACACCATGTGGCCACAACTTCTGCCTGAAATGCTTCCGAAGGTGGATTGAAAATGGTAAAAGAGCTTGTGTGATCTGCCGAGCACCTATTACACAAAAAGTAGCACAAGATCTAAGAATTAACTTGGCACTAGTCCAAGCTATCCGCATGGCCAAGGCTGCAAACAATGCTAGCACAACTGGTGAAACAACGGTTTATCATTATAAAGAAAATGAAGATAAACCTGACAGAGCTTTCACTACTGAAAGAGCAAAGAGAGCTGGAATGGCAAATGCTTCAAGTGGACAAATATTTGTGACTATTGCACCAGACTATTTTGGTCCAATTCTTGAAGATCATGACCCAAGGAGGAACCGCGGTGTTCGAGTCGGGGACCATTGGAAAGATAGAATGGAAGGTAGACAGTGGGGTGCTCATTTCCCTCATATTGCTGGGATTGCCGGCCAATCTACACATGGGGCTCAATCAGTTGCCCTCTCAGGAGGTTATTTAGATGATGAAGATCATGGAGAGTGGTTCCTCTATACTGGAAGGTTTAATATTACTACCTGACCTTACATTGCGATTTGTTTCTGTGGTTTATCAAAAACTAGTTAATCCATTATTTTCTACATTTGGCAGTGGAGGAAGGGATCTAAGTGGAAACAAGCGAACAAGCAAGGAGCAGTCTTTTGATCAGAAGTTTGAGAAGCTGAATGCTGCATTACGTGTTAGCTGCTTAAATGGCTATCCCGTGAGAGTTGTACGGTAATGTTTTTTTTTCTCTATGTGCATCCATGACAAATTTAGTGTTAGTTTATGTAAAATCATCATTATATTATTTCCTATGGGTTGCTTCCGGGACCATCACAAAAAATCAAAGCCATCACAGAAGGACGTTCTTCTGGTAATGCACGGAGAATATATGTAGACCTCTATATGTTGCAAGATATTATTTGTTCCATTATTGTTATGTAATTATGATACGTTGCGAATAACTGTACTCACACAAGGTTATTGTCTTTTAAGGCTTTCAGTGTTACGTTTAGTATGTTTCCACTACATCTAATACGAACAATCTTGTTTCATTTCTTTGGAAAAAGTAATCCCAATTTTTGTTTTTGTATATGTTGTTCTGTTTGTTTATTAAAAGGTCTTTTAAAGAGAAGCGCTCACCATATGCTCCAGAGTCTGGTGTTAGGTATGATGGAATCTATAGGATTGAGAAATGCTGGAGGAAAACTGGAGTTCAGGTATTTATAGTTTTCATGAAACATTACAGATATTTTTTGTGTAGGCTGCAATGATTTTTTTTTTAGATTTACAAAACTGAATGTATCCAAAATTATAGTTTATCAACTTATCAATATAAGTGATGATTGTTGGAGTTTTTGTTTTTTGGCCTCAGGGTACATTCAAAGTGTGCAGGTATCTCTTTGTGCGGTGCGACAACGAGCCAGCACCATGGACTAGGTTTCTTATACATCCCTTATCTCATGTATACATTGCTATTGTTATTCTATTTATTTACTTTTCCATTTAATTTTCTATATTTACTTGAAGTGATGAACATGGAGACCATCCAAGGCCATTACCAGATATCGAAGAGCTGAAAAATGCAATTGATATTACTGAGAGGAAAGGAAACCCAGCATGGGATTTTGATGTAAGTTGTTGTATTATGTTCTCAGAAAAAATATTAGCTTGCACATATTGTGACATCTCCTTTTTCTTGTTATAGGCAACAGATGGATGGAAGTGGATGATTACTCCACCCATCAGCAGGAAGGCTGTCGTAACTGGAGATCCTAGAGGCAAGAAAATGCAAGGAGCAGCAAGGCATACAAATAACTTGTCAATGAGAGAAAGGCTGTTGAAAGGTTTTTTTTTTTTTTGTCTATGAATTGCAGTTCATAGTAGTGGCTGCTTGGCATTGCATTTCCACTGATTTCAGTCATATATTTTCTTTATTATAGAATTCAGATGCTCCATATGTAGGAACGTGATGGAAGAGCCAGTGACAACACCGTGTGCTCACAACTTCTGCAAGAAATGCCTGCTTGGGTCATATGATAATCTTTCCCTTACAGAGGAGAGAAGCCGTGGTGGTCGGACCCTCCGGGCACGAAAGATTGTTAAAAAGTGCCCTTCTTGTCCAAGTGATATCGCTGATTTCGTACAGAATCCTCAGGTACAGTAAAATAGTAGCAAAATAATTTTGTATAGATTTTAGTCATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCACTTCCTCAGGTTCAGACATTAAGCTGCTGCATTATTGAAACTTGAAACATATGCAAATTGCTTGTGAAGTTTTTTTTGTATTCTTCCTCTTTTGTTATCCCTTTTTCTTTGATTATATTTTTGTTTGCTTGCCCTGTTTACTTTGCAAAAACTAGCTTGGACTGAAATGATTCATGGGTCGTGAAATGGAAGAAATAGTGGTGATATATATTGTTGTTGCATTGATTCCCAGTTTCTTTCACGGTATAATGCAGTGGTGGATTTACCACCCGGCTTGGGCAGGCAGTTGTCCAGGCTATATGAACGCAAACTATCAAACTGGACTGATTTCTCTACGGTAAAATCCATGGATTTAATTACTTCCTGCACAAACCAAGTAGATTAGATTTAACTACTCTAGTTGGGCTGTACAAGCAGCAAGCCTTATAGGCTTACAGCCCTGTAGCATGCAATTGAGCCCTATCACAATGAATAACATATGGCATGCTCAAGCTTATACGAATCATCTTGTCTTTCAACTATTGAAAATTTTACATGCATTTTGAACTAACAAAATTGTTTTGCCTTTAATTAGTAGTAAAATGAGCGTATAGGCATTACACATGTGGGTAGCGGATTTGGTTAGACTTTCCCATGCTTTGTGAAATTCCTGGCTCCTTCACTGGTATAATGCATTACTAGATAAGGGAAGGCTCCTATATGCTAAGTTCTAATTGATGTTATTGGGTGTTCCTCTCAACACCTGGGAACTTAGTGGTCGTATCAACAGATATTCTCGATAACATCTGGTGCATAACGTGTGCTACAAATGAAGAAGAGGCAGAGGTTTTTAACCCTCTCATGAGTAGCACGCCCAACCAGGTTGATATGGTAGGACAGAGAGGTAGAGCTGAAGTGACTTTCTTGGAAGTTGAATTGAGTTGCAGGTTTGCTTGAAGTTTCCTCAAGGCTGTAGTGCTCCAAAGTGAGTACAAAAATTACTGTGTGATGGATACCATGATGATTGATGAGCTTATGATAAAAAAAATATCGAAATTTTACAGTGCATGGTTTATTGGTTTTGGGTGCAGAAATTTGGCTGCTATTTTATTCGAATTTCTATTGAGCTTGATTGTTTTGACTGAATTAATTGGGGTACCAACTCAAGTGATAAAATCATCAATCTTTTATTGCAGGCTATTCATGCCACCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016079