BGIOSGA016084

From RiceWiki
Revision as of 04:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016084| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016084, complete gene.| tag = OS04G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016084

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016084, complete gene.

LocusTag

OS04G0291100

Ensembl Transcript ID

BGIOSGA016084-TA

Ensembl Protein ID

BGIOSGA016084-PA

Length

4182

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:10575197..10579378

Sequence Coding Region

10575197..10575215,10576216..10576447,10576860..10576939,10577184..10577337,10577468..10577546
,10577956..10578040,10578551..10578597,10579220..10579378

Genome Context

<gbrowseImage1> name=IndicaChromosome04:10575197..10579378 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:10575197..10579378 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTTCAAGACACAATGTGCCTCCAGTGGGATTGGTGCTGAAACATGCCGAGTTCTCGCGATGCGGGGAGTGCACGTTGTGATGGGGGTAAGGAACTCATCTGCCGGTGCGCGTGTAAGGGATGAGATAGCGAGACAGGTTCCGGCTGCAAAGATTGAGATGCTGGATCTTGACCTCAGCTCGATGTCGTCCGTGAGGAGATTTGCGGAGAATTTCAATGCTCTGAATCTTCCTCTGAACATCCTGGTTAATAATGCAGGGATTGCGTTTGTACCATTTAAGCTATCAGAGGAGGGCATTGAGCTGCATTTTTCAACAAATCACCTTGGGCATTTTCTACTGACCGATCTTTTACTTGAGAAGATGAAAGTTACAGCTATAGAAAGTGGGATAGAAGGAAGGGTTGTGATAGTTGCTTCTGACAGCTACAAGCACCCTTATCGAGAGGGAATTCGTTTTGATAAGATCAATGATGAATCTGGGTATAACAAAATCTTCGCTTACGGCCAATCCAAGCTTGCCAACATACTGCATTCCAATTTACTATCTAGCAATCTGAAGGAACAAGATGCAAAAGTAACAGTCAACTCTCTGCATCCTGGAGCTGTTGTCACCAACATTATGCGTCACTGGTATTTCGTAAATGGTATGCTATCTACACTTGGTAAATTTTTCGTTAAAGGTGTTGAACAAGGTGCAGCCACAGTGTGCTATGTGGCATTGCATCCTCAGGTTGCTGGAGTCACTGGCAAATACTTTGTTGACTGCAATGTCACTGAATTAAAATCTCATGCACTCGACATGGACCTCGCCAAAAGATTGTGGGATTTCAGTCTCAACCTAATCCATTAG</cdnaseq>

Protein Sequence

<aaseq>MDFKTQCASSGIGAETCRVLAMRGVHVVMGVRNSSAGARVRDEIARQVPAAKIEMLDLDLSSMSSVRRFAENFNALNLPLNILVNNAGIAFVPFKLSEEGIELHFSTNHLGHFLLTDLLLEKMKVTAIESGIEGRVVIVASDSYKHPYREGIRFDKINDESGYNKIFAYGQSKLANILHSNLLSSNLKEQDAKVTVNSLHPGAVVTNIMRHWYFVNGMLSTLGKFFVKGVEQGAATVCYVALHPQVAGVTGKYFVDCNVTELKSHALDMDLAKRLWDFSLNLIH</aaseq>

Gene Sequence

<dnaseqindica>1..19#1020..1251#1664..1743#1988..2141#2272..2350#2760..2844#3355..3401#4024..4182#ATGGACTTCAAGACACAATGTGTGTATGACAGGTGGGACCATGTATTAATAATATAGTAAGCAACTACTCCCTCCGTTTCAAAATATATGGCGCAATTACTTTTTAATGGTGTTTCATAATATAAGGCGTGCATGCATGCATGACAATTAATAGCACATTCTCTCTCCTAGATTATTATTTTTTAAATCAAGATGTTTAATTCTATTAGGTGCATGTATTTTATTAGTTGGGATTATTCAAACAAAGAGGTGATAATAATTATTTCTTGGTCTTTGGGTTTAGGGTGGTTGTGGCTTATATACTACTATTGAACTTGCTCTTATACGTTTGATTGCAAGTTGAAACGTTTTATTTAAGAAAGTTGAGTGTCTTAATTTAAGCCACCGGCCGGAAGCTGTTCCCACGGCGGCACAAGACAATGTGGGGCCTACTGAGGCGGCGGAGCCCCTCCGGGTTCTCGCCGTCGTCCACCGGGGAGGAGGTCACCGCCGGCGTCGACGGCTCCGGCCTCGTCGCCGTCGTAACCGGCAAGTGAACTGTGCTCTCATCTCTCCTCCAGCAGCTGCTCGTTTCTTATAATTCTTGGTTCAGTTCATACTTCATAGCATCCCCTTGTTCTTGGTTGACTCCTGTTTCTTCTGAACATTCCCTGCTCGAATCCAAGAATCGTTGGTCTGAACTGAAATTGCTCGAGGAATTTAGTGATACTCTTCGATTTGAGGGGAAATTGGCATAGTTTACTGTTCGGTGTATAAAAATCTTGCATATTGCAGTAGATAAATTTGGGGGGAAATTATGAAAGATTATTTATATACTAAATGTATTTATAATTTTACCAACCATTAATCAAATTCCCCCCCAAGATTTACTCTTCAGGAATTGGACCAACGGCATCATCTGCTGATGCAAGCAGCAGGAATAAATCTTGCATATTGTTCTCCAATTCCTGCTTCGTTAATCGAATTTGTAGGCCTGAAATGCTGGTGGAATAATTGCTGATTGGAGATGTTTCTTGCAGGTGCCTCCAGTGGGATTGGTGCTGAAACATGCCGAGTTCTCGCGATGCGGGGAGTGCACGTTGTGATGGGGGTAAGGAACTCATCTGCCGGTGCGCGTGTAAGGGATGAGATAGCGAGACAGGTTCCGGCTGCAAAGATTGAGATGCTGGATCTTGACCTCAGCTCGATGTCGTCCGTGAGGAGATTTGCGGAGAATTTCAATGCTCTGAATCTTCCTCTGAACATCCTGGTGTAAGCAGATCTAATGCTTATGTATATTGGCAAGATTTGGTAGAACAAAAGATTATGCTTCCTCGCAAAAAGAAAAAAAAAACTTTATGCTGTTTTACAGAATTATTTTAGCAGCAAAACCTTCTGCAACATAGATAATTTGGGTGCTAAATAAACTGGAATGAGCATTTGAGCTGGCTATTGGGATTCAGACACTCAAAGCATGCTTAATAGACAGTTTTTTTGTATTACTGGGTTATGTCATTAGTACTGTCATTTTCTGGAAGGTAAAACAGTCCATCAGACCTCTACTAAAAAACTTTTATTCCATCTATGTTGAAGTGTTCTTTTTTTACAAATTGCCTTTTTTTTGCGAGGAATACGTCGTCCTATTTATGTTTGAGAAAATAATTTTAGTCTTCTCTGTTTAAAGTAATAATGCAGGGATTGCGTTTGTACCATTTAAGCTATCAGAGGAGGGCATTGAGCTGCATTTTTCAACAAATCACCTTGGTAGGCCCCCTCTTACAGTCCCTTAAACTGCATACTAAAACTTTTTTTATTTTAAGTAGGTTTTGCCAAAATTCATAGAATATTATTGTTTTATTTTCTATTTGTTACTAAGACAGATGTACTTTACACATTTGTGTGTGGTCATATTTCACTTGACTGATCTTGTAACCATGTTTGGTTACAAACGTGCAAAATTTCTGTTATTATTGTGTAACTGCATCGTGCAATTAATCATGCAATGCAGGGCATTTTCTACTGACCGATCTTTTACTTGAGAAGATGAAAGTTACAGCTATAGAAAGTGGGATAGAAGGAAGGGTTGTGATAGTTGCTTCTGACAGCTACAAGCACCCTTATCGAGAGGGAATTCGTTTTGATAAGATCAATGATGAATCTGGGTATTACTTTCTGACCCAACGTATACTCTTTTTTACATTTATTTACCTTTTCAATCGATCAAAGGTAAGAAAACAGATCTGCACAAAAACATCATATTCGAATTTAATTATTTTTATTCTCTCGCGCTAGGTATAACAAAATCTTCGCTTACGGCCAATCCAAGCTTGCCAACATACTGCATTCCAATTTACTATCTAGCAATCTGAAGGTTCCACTTTTCTTCTTGTTTCCCTTTAAGCTCATACTTTTGGAACAACTGGTGGTTCACACTAACTCTTGTTTATTTAATTGTACACACTGTTTGTCCTCAAAATTACACAATTTTGTAATCTTGTAAAATGGAAAAGAAATTGTAGTAGGCTATTTTTCTTGAAATTACGAACTGTAATATGTTAGACATGCTGTTAACTAAATCATGTAGATCTTTGGCTGAGACAGTAATATGAAGTTATCACAAAATAGATCTCATAATAGCAAAGCTATGCAGAGGATGGATGTCAAAAGCCCTGTTATTTTTGTTATGGAGCTGTTCTGTGAATAGATGATATCAATGATTGCATTACTATTTCAAAATGTTTCACATATTTTCTTGATGATGAATGTTTGTCTGCTAAAAGGAACAAGATGCAAAAGTAACAGTCAACTCTCTGCATCCTGGAGCTGTTGTCACCAACATTATGCGTCACTGGTATTTCGTAAATGGTATGGGCATATCTGACAAATGCATATAGTTCTTGGCAAAATAAAGCTAAATCAATCTTCATGGATGGTTCATCGAATCTCAGACAGTATTTGCTTTTATCTTTCTGGCTAGTTGAGTTTTTGCTTCATTGTGCTCATATTCATCTATAGTACAGCTATGAGACATCCATTTCTTCTATGTAGTCACATAAGTTTAGGCTTCAGTTGCCATCACTATTATCTTAATTGCATGGATACATCTTCTTTCAAGCCTATTAATCTGATTTACTTCTCTTCCAGTTGTATAAAGAGTTTTTCCAGAACTTCTTTGTGCATTAAAGTGCATGATCATTCCATATACAAAAAATTCTTGAGAGCATTACCTTATTAAAGAAATATTTCATTCATGGAAGATCACTATGGTTGTCCAGTGCAAATTGTAAAAGCCCCACATTTGTGCTTTATTATTTGAATGAATAATGAACTGGAAACAATGCACAGTGATTGTTCTTCCTTGTTTTTTAATTTCAGGTATGCTATCTACACTTGGTAAATTTTTCGTTAAAGGTGTTGAACAAGTAAGTTTTGGATCATTTTTTTTTTCTGTTCCTTTCACAAGACTAAAGTGACAGTTGTATTTACTATTTTTACTGTATATTCAATTTAAGTATTTTATTGTGTATGCAATTTATGTCAATTTCATTACATATGTTCTTGTGACAGTTATATTCACTATTTTCTTGTATATTCAATTTGTATTTTATTGTGTATGCAATTTATGTCTATTTCATTACATATGTTTTCTGAAAAATTTTATTCAACAGAAACACACAAAATAATTCTAAAACTTTAATCCTAGTACTAGTGGTAAGTGTACATTCTAAAACTTTTTGACTGCTCCTAAATAATTGGATGTGTCATGGAATAATTAACCTAATAAATATATAAATATGGAAAAAAATGTATTTATTGCTTATATCATTCAACATTTTCCTGCAACCTGAAAAAACAGGAGCTGCAATATTACCATGACTCTACCAGGGACTATTTTTTGTAGAGTTAATGTTATTAAACCCATGAACTAACTGGCACCAGGACAAAGTCTCCTTGAAATTTTACTAATTCAGTAATTCATAACATGTTTAATTGTGCAAACCATCCAAGCACATAATCACTGCTTAGTATTGTTTGTTTTTGCAGGGTGCAGCCACAGTGTGCTATGTGGCATTGCATCCTCAGGTTGCTGGAGTCACTGGCAAATACTTTGTTGACTGCAATGTCACTGAATTAAAATCTCATGCACTCGACATGGACCTCGCCAAAAGATTGTGGGATTTCAGTCTCAACCTAATCCATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016084