BGIOSGA016093

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Revision as of 04:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016093| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016093, complete gene.| tag = OsI_152...")
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Gene Name

BGIOSGA016093

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016093, complete gene.

LocusTag

OsI_15263

Ensembl Transcript ID

BGIOSGA016093-TA

Ensembl Protein ID

BGIOSGA016093-PA

Length

3926

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:10774254..10778179

Sequence Coding Region

10774254..10775194,10776025..10778179

Genome Context

<gbrowseImage1> name=IndicaChromosome04:10774254..10778179 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:10774254..10778179 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTCGTCGTCGGCGCGTCGAGCGGCGCCGTGAAGTCCCTGGTCAGCAAGCTGGGCAGCCTCCTCGCGCAGGAGTACACCCTGGTCGCCGGCGTCCACGACGACATCCAGTACATCAACGACGAGGTGGCCAGCATGCAGGCCTTCCTCAGCAAGCTCAAGCGACGACGGGACGTCGACCACGACGAGCAGCGTCAGGACTGGATGAAGCAGGTGCGCGAGGTGGCCTACGACATCGAGGACTGCGTCGACGATGTCGGCTACCGCCTCGGCCGCGAGCCCCGGGGGAGCGGCACGGCCATCTCCTTCCAAAGGGCGTGGTACCTTCTCACCACCCTCTACCAGCGCCGCCGCATCGCCGCCGAGATCGGCAACCTCAAGCTCCGGGCGCAGCATGTCAGCGAGCGCCGCACCAGGTACGGGGTGGAGAACCTTTACCTCCCAGCTGGTGGCGGCAGCAACGACAAGTCCAGCGTCGGAGCTGACGTTCCCAGAGACCGTCCAGCTCCTCTTCCCCGGCTGATTGGCACCATGGAGCCTGTAGGCATGGAGGATGCCATGAAAGAGCTCGAGCACTGGTTCGTGAAGGAGCCAAAGCAGATCCATACTCACACTAGTACAGAGACCGCTGTCAGCAATGAGCGAAGCACTCAGCATAACACTCAGAAGCAGATCAATTTCATCGCCATCGTCGGATTTGGGGGCCTTGGCAAGACCACGCTGGCGTTCGCGATGTACCACAAGTTTGGACACGAATTTGATTGTAGAGCATCCGTTCTCGCCTCGCAGAAGTTCGATCTCCGGACGGTTCTGATAGACCTTGTAAGGCAGTTCCATGAAAAGCATGCCGGCACTTCTCAGGATGCCCTCCACGGAATCGAGAAAGAGGGGGATGAAGAGCTCAAGAAGAAGCTCGCCGATCAATTAAAAAATAAGAGGTACCATATCTTGATAGATGACATATGGTCTGTGTCAGCATGGGAAAGTATTAGGGATTCATTACCCAAGAATGATAAGGGTAGCTGCGTAGTAGTGACTACAAGGTTTAACTCAGTAGCTGAAGCCTGCCGCCGTCAAAATGGTCATGTGCACAAGCTCAAACAGTTCGATCTAGAGAGCTCCTACAATTTGTTTCTTCAGATAATATCTGCAAATGATCTGTGTCCCATTAGACCCATTAATGGTAGCATTATCATGAGGGTATGTGGGGGTCTGCCCTTGGCCATTGTAGTAGTAGCAGGGCTGATTGCTAGTAAACTGAAATCAAAGATAGACCAGACATTGGATCAGCATTTGGTTGAAGTAGATGAGGCTTTAAGTGCAGAGTTGGGAAACAATCTCACCACTGAAGGAGTGGCGCAAATAATTAACCACTGTTACAAAAATCTGCCATCTGATCTTAAGACATGCTTGCTGTACTTGAGCACATTTCCAAAGGGCCGCAATATTAGCAGGAAGCATTTGATAAGAAGATGGATTGCTGAAGGATTCATTACTGAAGAGCATGGGAAGACTGCCGATGAAGTTGCAGAAGACAGCCTCAATGAACTCATTGGCAGGAATTTGGTAAAGCCTATCAACAACAACAGCAACGGCAAGGTGAAGAGCTGTCAAATTCATGACATGGTCCTACAGTACATTGTCTCCAAGTCTAGCGATGAGAATTTCATCACCGTTATTGGTGGCCACTGGCAGACGGCATTTCCAAGCTACAAGGTACGGCGGTTGTCTGTCCATAAAAATGGTCAACAAGAAACTGAAATGATAGAGAAGATGAAGTTGTCTCATGTCCGATCCTTGACAGTGTTGGAAAGCTTCGGTGCTCTTCATTCTAGTATGCTCAAGTTCCAGATACTGCAGGTGTTGGACCTTGATGGCTGCAAGGACTTGTCCCACTCCCATCAGCTCAAGAAAATATGCAACATGTATCAGTTGAAGTACCTGGGCCTGCGGCGGACAGATATTGGCAAGATCCCAAAGAATATAGGGAGGCTGGAGTACTTGGAGGTACTTGACATTAGGGAGACAAATGTCACAAAGTTGCCTACATCATTTGCGAAGCTTCAGCGAATGACCCATCTACTTGCTGGCAACAAAAGCAAGCAGACAGCATTGACATTAACTGAGGAAATCACAAAGATCGTAGCTCTAGAAACACTTTCTGGGATTGAGATCAGTGGAAGCTCAACTTTGGAAGAAGACCGGAAACAGTCACCAGATATGGCCATCAGACACTCTACAACCACCAGAGCCGAGGACAGAGACAGCACCGCTTTGCATGGTCCCCAAAAAGAAGCTAGCAAAGTGGACTTTCCAAAACAGCTGCGTCCTCTTGAAGCCTTGGAGAAGCTCACCAATCTTAAGAAACTTGCCATTTACAAGCTTGTAAAGTTCCAAGTAAAGGACGATGAGTTACTGCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCCCTCAAGTTTCTTGCGATTGATGACAATTTCACAGGTTTCCTTGACAGCTCACTGAGTTCCTCGCAAGCACCACCAGAACACCTGTACACCCTTGAGCTTTCTGGCATGTTGTCTAAAGTGCCTGGATGGATTGACCGCCTGCACAACCTTGAGAAGCTTACTCTGTCCTTGACTTCACTTACGACAGATACTTTGGTGACTCTTAGTGGGCTTCCTGAGCTTTTCTCTCTTATTTTTTCACTCAATGAAGATGAACCAAAGGATATTTCAAATGTCCTCAAAATTGTGCATAAGAATACATTGGAGTCAGGTGGTAAAATCTTTGTGACGGATGGGGGTTTTACAAAGCTGAGGTTGCTGCGTTTTACAGCACCAGCGCTACCACCTCTGAGCTTCCTAGAAGGGGCGATGCCAAAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATCATTGAGTGTGTGTACGGCCTGGAAAACCTTCCAAGTCTCCAACAGGTATTTATGACATTTAGCAGCCAGGCACCTGAAGATGCCAAAGAGAAGGTCTCTCAGATCAAAGGACAAGCAAGCAATATTCGAAAGGATAATGCCCCCGACATTATTGTGGTGATAGACGAGTACAATGAATTATCAAAAGAACAATAG</cdnaseq>

Protein Sequence

<aaseq>MELVVGASSGAVKSLVSKLGSLLAQEYTLVAGVHDDIQYINDEVASMQAFLSKLKRRRDVDHDEQRQDWMKQVREVAYDIEDCVDDVGYRLGREPRGSGTAISFQRAWYLLTTLYQRRRIAAEIGNLKLRAQHVSERRTRYGVENLYLPAGGGSNDKSSVGADVPRDRPAPLPRLIGTMEPVGMEDAMKELEHWFVKEPKQIHTHTSTETAVSNERSTQHNTQKQINFIAIVGFGGLGKTTLAFAMYHKFGHEFDCRASVLASQKFDLRTVLIDLVRQFHEKHAGTSQDALHGIEKEGDEELKKKLADQLKNKRYHILIDDIWSVSAWESIRDSLPKNDKGSCVVVTTRFNSVAEACRRQNGHVHKLKQFDLESSYNLFLQIISANDLCPIRPINGSIIMRVCGGLPLAIVVVAGLIASKLKSKIDQTLDQHLVEVDEALSAELGNNLTTEGVAQIINHCYKNLPSDLKTCLLYLSTFPKGRNISRKHLIRRWIAEGFITEEHGKTADEVAEDSLNELIGRNLVKPINNNSNGKVKSCQIHDMVLQYIVSKSSDENFITVIGGHWQTAFPSYKVRRLSVHKNGQQETEMIEKMKLSHVRSLTVLESFGALHSSMLKFQILQVLDLDGCKDLSHSHQLKKICNMYQLKYLGLRRTDIGKIPKNIGRLEYLEVLDIRETNVTKLPTSFAKLQRMTHLLAGNKSKQTALTLTEEITKIVALETLSGIEISGSSTLEEDRKQSPDMAIRHSTTTRAEDRDSTALHGPQKEASKVDFPKQLRPLEALEKLTNLKKLAIYKLVKFQVKDDELLLSAIEHLSSCSLKFLAIDDNFTGFLDSSLSSSQAPPEHLYTLELSGMLSKVPGWIDRLHNLEKLTLSLTSLTTDTLVTLSGLPELFSLIFSLNEDEPKDISNVLKIVHKNTLESGGKIFVTDGGFTKLRLLRFTAPALPPLSFLEGAMPKLQRLELRFRIIECVYGLENLPSLQQVFMTFSSQAPEDAKEKVSQIKGQASNIRKDNAPDIIVVIDEYNELSKEQ</aaseq>

Gene Sequence

<dnaseqindica>1..941#1772..3926#ATGGAGCTCGTCGTCGGCGCGTCGAGCGGCGCCGTGAAGTCCCTGGTCAGCAAGCTGGGCAGCCTCCTCGCGCAGGAGTACACCCTGGTCGCCGGCGTCCACGACGACATCCAGTACATCAACGACGAGGTGGCCAGCATGCAGGCCTTCCTCAGCAAGCTCAAGCGACGACGGGACGTCGACCACGACGAGCAGCGTCAGGACTGGATGAAGCAGGTGCGCGAGGTGGCCTACGACATCGAGGACTGCGTCGACGATGTCGGCTACCGCCTCGGCCGCGAGCCCCGGGGGAGCGGCACGGCCATCTCCTTCCAAAGGGCGTGGTACCTTCTCACCACCCTCTACCAGCGCCGCCGCATCGCCGCCGAGATCGGCAACCTCAAGCTCCGGGCGCAGCATGTCAGCGAGCGCCGCACCAGGTACGGGGTGGAGAACCTTTACCTCCCAGCTGGTGGCGGCAGCAACGACAAGTCCAGCGTCGGAGCTGACGTTCCCAGAGACCGTCCAGCTCCTCTTCCCCGGCTGATTGGCACCATGGAGCCTGTAGGCATGGAGGATGCCATGAAAGAGCTCGAGCACTGGTTCGTGAAGGAGCCAAAGCAGATCCATACTCACACTAGTACAGAGACCGCTGTCAGCAATGAGCGAAGCACTCAGCATAACACTCAGAAGCAGATCAATTTCATCGCCATCGTCGGATTTGGGGGCCTTGGCAAGACCACGCTGGCGTTCGCGATGTACCACAAGTTTGGACACGAATTTGATTGTAGAGCATCCGTTCTCGCCTCGCAGAAGTTCGATCTCCGGACGGTTCTGATAGACCTTGTAAGGCAGTTCCATGAAAAGCATGCCGGCACTTCTCAGGATGCCCTCCACGGAATCGAGAAAGAGGGGGATGAAGAGCTCAAGAAGAAGCTCGCCGATCAATTAAAAAATAAGAGGTATTATTTTGGCTTAGCTATTTCTATCTATTTCATTCATACTTCCGTAAGCATGCTCATCTACATTTCTAGTTCATCCTTGATTGGTCTCACTAGGTTTTAGAGTAGTAATTTAATAGCATACTCAATTTGGACTATAATATAACTACTGTTTTGGGGAACGGCTACTTTCTCCGGTCACATTGTTTTGGATACAATCGGCTAAAAAAAAAACTCAATTTTGACTATTATTTTATTGTATTTCATTTATATAATCAAAAAATTTATATCTATACTCTTTTAAAAGAAGGCAGTGATGATGACGGTGAATCTATCACTACACCTACTTCTTAATATTAAAACAACTAAATATAAATGGATAGCTACATATAAAATTAAATTATTAAAGGGAAATTTGCAAATTTGCCACTGTTTTTTTTTTCAATTTTTAAGGATGCCACTTGAATAACAGTTCTAGTGATAATTTTGTAATTTTTTAGTGATAGCCTTATAATAACGATTCAAACCAGTGACAAATTTGCAATTGTCCTATTAAATTAAGGTGAGGCATGGCGTACAGCTGGTTCCTATTTTATGTTTTTTTTGGTATTTTCTTCTAGTTTTCAATCGGTGCTTGCTGTCTCACACTCAGGATCCTGGCCGTCACTGTTGCGGCTAGGTAGGGGCTGCTGCCTCAACAACAATGTTGTTGTACCCTATGTTAATGGAAAATAAATACGAAATATTAGTCTCCAAATTGGAAAAGTTCGACTATATATTTGTGTCTGGAATGAGTATCACAATACGTTATTTAGAACTACTTACTTACTTCCAAACAATGGTTGAAGCAGGTACCATATCTTGATAGATGACATATGGTCTGTGTCAGCATGGGAAAGTATTAGGGATTCATTACCCAAGAATGATAAGGGTAGCTGCGTAGTAGTGACTACAAGGTTTAACTCAGTAGCTGAAGCCTGCCGCCGTCAAAATGGTCATGTGCACAAGCTCAAACAGTTCGATCTAGAGAGCTCCTACAATTTGTTTCTTCAGATAATATCTGCAAATGATCTGTGTCCCATTAGACCCATTAATGGTAGCATTATCATGAGGGTATGTGGGGGTCTGCCCTTGGCCATTGTAGTAGTAGCAGGGCTGATTGCTAGTAAACTGAAATCAAAGATAGACCAGACATTGGATCAGCATTTGGTTGAAGTAGATGAGGCTTTAAGTGCAGAGTTGGGAAACAATCTCACCACTGAAGGAGTGGCGCAAATAATTAACCACTGTTACAAAAATCTGCCATCTGATCTTAAGACATGCTTGCTGTACTTGAGCACATTTCCAAAGGGCCGCAATATTAGCAGGAAGCATTTGATAAGAAGATGGATTGCTGAAGGATTCATTACTGAAGAGCATGGGAAGACTGCCGATGAAGTTGCAGAAGACAGCCTCAATGAACTCATTGGCAGGAATTTGGTAAAGCCTATCAACAACAACAGCAACGGCAAGGTGAAGAGCTGTCAAATTCATGACATGGTCCTACAGTACATTGTCTCCAAGTCTAGCGATGAGAATTTCATCACCGTTATTGGTGGCCACTGGCAGACGGCATTTCCAAGCTACAAGGTACGGCGGTTGTCTGTCCATAAAAATGGTCAACAAGAAACTGAAATGATAGAGAAGATGAAGTTGTCTCATGTCCGATCCTTGACAGTGTTGGAAAGCTTCGGTGCTCTTCATTCTAGTATGCTCAAGTTCCAGATACTGCAGGTGTTGGACCTTGATGGCTGCAAGGACTTGTCCCACTCCCATCAGCTCAAGAAAATATGCAACATGTATCAGTTGAAGTACCTGGGCCTGCGGCGGACAGATATTGGCAAGATCCCAAAGAATATAGGGAGGCTGGAGTACTTGGAGGTACTTGACATTAGGGAGACAAATGTCACAAAGTTGCCTACATCATTTGCGAAGCTTCAGCGAATGACCCATCTACTTGCTGGCAACAAAAGCAAGCAGACAGCATTGACATTAACTGAGGAAATCACAAAGATCGTAGCTCTAGAAACACTTTCTGGGATTGAGATCAGTGGAAGCTCAACTTTGGAAGAAGACCGGAAACAGTCACCAGATATGGCCATCAGACACTCTACAACCACCAGAGCCGAGGACAGAGACAGCACCGCTTTGCATGGTCCCCAAAAAGAAGCTAGCAAAGTGGACTTTCCAAAACAGCTGCGTCCTCTTGAAGCCTTGGAGAAGCTCACCAATCTTAAGAAACTTGCCATTTACAAGCTTGTAAAGTTCCAAGTAAAGGACGATGAGTTACTGCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCCCTCAAGTTTCTTGCGATTGATGACAATTTCACAGGTTTCCTTGACAGCTCACTGAGTTCCTCGCAAGCACCACCAGAACACCTGTACACCCTTGAGCTTTCTGGCATGTTGTCTAAAGTGCCTGGATGGATTGACCGCCTGCACAACCTTGAGAAGCTTACTCTGTCCTTGACTTCACTTACGACAGATACTTTGGTGACTCTTAGTGGGCTTCCTGAGCTTTTCTCTCTTATTTTTTCACTCAATGAAGATGAACCAAAGGATATTTCAAATGTCCTCAAAATTGTGCATAAGAATACATTGGAGTCAGGTGGTAAAATCTTTGTGACGGATGGGGGTTTTACAAAGCTGAGGTTGCTGCGTTTTACAGCACCAGCGCTACCACCTCTGAGCTTCCTAGAAGGGGCGATGCCAAAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATCATTGAGTGTGTGTACGGCCTGGAAAACCTTCCAAGTCTCCAACAGGTATTTATGACATTTAGCAGCCAGGCACCTGAAGATGCCAAAGAGAAGGTCTCTCAGATCAAAGGACAAGCAAGCAATATTCGAAAGGATAATGCCCCCGACATTATTGTGGTGATAGACGAGTACAATGAATTATCAAAAGAACAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016093