Os09g0407200

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Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0407200| Description = Similar to RAD23, isoform I| Version = NM_001069669.1 GI:115479080 GeneID:4347014| Length = 3908 bp| Definition = O...")
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Gene Name

Os09g0407200

Description

Similar to RAD23, isoform I

Version

NM_001069669.1 GI:115479080 GeneID:4347014

Length

3908 bp

Definition

Oryza sativa Japonica Group Os09g0407200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15016746..15020653

Sequence Coding Region

15016808..15016873,15017206..15017367,15017782..15017835,15018371..15018435,15018753..15018821
,15018952..15019129,15019447..15019593,15019678..15019794,15019869..15019981
,15020065..15020143,15020254..15020382

Expression

GEO Profiles:Os09g0407200

Genome Context

<gbrowseImage1> name=NC_008402:15016746..15020653 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15016746..15020653 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagatatccgtgaagacactcaagggatccaccttccagatcgaggtggactccgcgcagaaggttgctgatgtgaaaaggataatcgagactactcaaggacagcacatttacccagctgagcaacagatgctcattcatcaggggaaggtgctcaaggatgacaccacattggatgaaaacaaagttcttgaaaacagcttccttgttataatgcttagacagggtaagggctcatcaagttcagctcctgctacatctaaggcaccctcaaatcaggctccccctactcaaacagtgcctgcagctcctgcatctcaagcaccagttgcaccagcaactactgtacctgtcactgtcagtgctcctaccccaactgccacagcttccccagctcctgctgttgctgtatcctctgaagctgataactacggtcaggccacctcaaaccttgttgctggcagcaatctagaggcaacaattcaatcaattcttgaaatgggtggtggaatatgggatagagacattgtgctgcatgctctaagcgctgcattcaacaacccggagagggctgttgaatatctgtactctggtgttcctgagcagatggacattccagttccacctccgagtatacagccagccaatcctacccaggcttcacaggcaactcaaccagcagctccatcaattctttcgtctggaccaaacgctagtcccttggacctctttcctcaagcccttccaaatgcttccaccgatgctgctggtctaggaaatcttgatgctttgcgcaataatgcacaattccgaaccttgctttctttagtgcaagccaatcctcaaattttacagccattgcttcaagaattggggaaacaaaatccccagattttgcagctgattcaggaaaaccaagctgagttcctccacttaatcaatgaaccagctgagggtgatgatgaagagaatttgctagaccagtttccagaggcaatgccacagaccatagcagttactccagaggagaatgaagccatacttcgtcttgaagcaatgggctttgaccgcgcgcttgttctggacgtgttcttcgcttgcaacaaggacgagcagctggcggcaaactatctcctagatcacatgaacgagttcgacgacgaggggccaccataa</cdnaseq>

Protein Sequence

<aaseq>MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQ MLIHQGKVLKDDTTLDENKVLENSFLVIMLRQGKGSSSSAPATSKAPSNQAPPTQTVP AAPASQAPVAPATTVPVTVSAPTPTATASPAPAVAVSSEADNYGQATSNLVAGSNLEA TIQSILEMGGGIWDRDIVLHALSAAFNNPERAVEYLYSGVPEQMDIPVPPPSIQPANP TQASQATQPAAPSILSSGPNASPLDLFPQALPNASTDAAGLGNLDALRNNAQFRTLLS LVQANPQILQPLLQELGKQNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAM PQTIAVTPEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNEFDDEGPP </aaseq>

Gene Sequence

<dnaseqindica>63..128#461..622#1037..1090#1626..1690#2008..2076#2207..2384#2702..2848#2933..3049#3124..3236#3320..3398#3509..3637#attccctcccctctcccctctccgccctagagctcgacggcggcggcaacaagggctgggggatgaagatatccgtgaagacactcaagggatccaccttccagatcgaggtggactccgcgcagaaggtatgctctggtctccgcgctctcgatctgtcggtcgcgagcgccgatttcgtttctttctttttctttttcttttgtggggggcgatctaggaggtggtgaccggattggggttaggtttgtttctacggctacgcaaggctatagctgtggatccaatctgattgtgtgattcgtgttactatatgtgattgatttctttgatggttggataactggattggttattataggtagtagtagtagtagtagaacagattaagttaaccagattgagtcatagttgtttcattctacgtgctatttataactgatctaatttcttaaagcaggttgctgatgtgaaaaggataatcgagactactcaaggacagcacatttacccagctgagcaacagatgctcattcatcaggggaaggtgctcaaggatgacaccacattggatgaaaacaaagttcttgaaaacagcttccttgttataatgcttagacaggtgggtacagcacctgtttgatgttatatggctattacctggcgcaaaatcatgaatatcatacttatcgtacaataatccatggaatgtcaaggtattcaactgcatgatcactatgcattttaagcatttgttcagggtatctgcagctctcagaatgtagtgagctatgttatgtattggaattgctttaaaagatgtagggcttcatcttgactctatgctaatcactactagtctgcaacaaaagaacaacttgtcagtacttctgttactcctttctggctgctgcaaagacaatccataaacctaaattttgaattgctgcagctattttgtcaatcgtttatatcatacttattgtaagaaagttctttgttgttttcacgtttttcgacttttgaactttcacagggtaagggctcatcaagttcagctcctgctacatctaaggcaccctcaaatcaggtgagatggaatttgaattattgcattgatagtggttattcaggacaattgcccttcatgttcattaaatatctctgctgtacgacgctatggtcagtactcgactattggtttatcagttattactttatcaaacaggcaaaacatagccataagtgataactagcaaaatatctaggatttcagcctgaacatctggctctcctaatatagctgcaaatgatgagcacttctatcaatctatagttaacacagatttgttcttagtcaactatggctgagcttgaagggtagcttttacaagttcagagctactagatttaactccatgtatctttgtcatctgttattgtcttgtagaatcattacttcctcttgagttaatctgaatgaggaagagctctatatgctgtatcattttaccaccatgtgaaatgctatccttttgttttcttgagtgtttattttatagtgtttcctcatggtatgtttctctactgagattatagatatctaaccatttattatttgccaggctccccctactcaaacagtgcctgcagctcctgcatctcaagcaccagttgcaccagcaactacgtgagttaactcagatttttatttttgcttcctttttaactctttaacatagcagatgcaattattatttgaagatgtattgctttatcagtttagttgtggagtgtagctattgctttgttagtttaattcacatggtagtgcacaaatacagcttagtttggaaggcttattatgttcatcttatcttctgttaacttgtgctagaaatgagtcagaacttgtttagtgttttactcagtgtcctataattgatttttgctactttgcagctaaatacctgccagctaactcatctgtcttatgtttaattgaagtgtacctgtcactgtcagtgctcctaccccaactgccacagcttccccagctcctgctgttgctgtatcgtgagttcctgatgttccatccattctataaatttgattattctcatgtgaatgtagtttctgcttgaggatgtgctgtaatttactgaacccattttgacttgatcttttcttcttgccatttgagcagctctgaagctgataactacggtcaggccacctcaaaccttgttgctggcagcaatctagaggcaacaattcaatcaattcttgaaatgggtggtggaatatgggatagagacattgtgctgcatgctctaagcgctgcattcaacaacccggagagggctgttgaatatctgtactctgtaagaacattcttttcctccctatttagttgctaggtcttgcttgacaatgattttctctgttcccgaatttgcctgtataactgtagctattgaacataccatgtcttgcttatagtagattgtatgaggctatataattgctaaatgatatacttgtttgttttatgggattgtttgtagttcgtttatcctttttaatttgtgctgtcttttgaatcgtatgtagtattctacagaaaatgcatgttgactcaaactttagattgcagatatttttggctgcaacactaatatccttgtctgctttaatgtagggtgttcctgagcagatggacattccagttccacctccgagtatacagccagccaatcctacccaggcttcacaggcaactcaaccagcagctccatcaattctttcgtctggaccaaacgctagtcccttggacctctttcctcaagtactctcttccgcacgagtgttttgttctctttcgcacgttagttgaattttgctctgattttttattttttaagcttttcaggcccttccaaatgcttccaccgatgctgctggtctaggaaatcttgatgctttgcgcaataatgcacaattccgaaccttgctttctttagtgcaagccaatcctcaaattttacaggtttttctcatactgctttccttaaaaataaaaaaaaaataaaaaacctcactgactggccaattcatttgcagccattgcttcaagaattggggaaacaaaatccccagattttgcagctgattcaggaaaaccaagctgagttcctccacttaatcaatgaaccagctgagggtgatgatgaagagtatgtcttaatctttgcttttatcataactcttttcttctgatgcgtttgctgtattaacaatctttccctttctgaaccaggaatttgctagaccagtttccagaggcaatgccacagaccatagcagttactccagaggagaatgaagccatacttcgtgtgagtcgaaaaatcccgaattcccctatgctctgcttagttgtcatcttgcttttagaatatttgctttacacataactagcataacatcctttctttcacatcctaagcttgaagcaatgggctttgaccgcgcgcttgttctggacgtgttcttcgcttgcaacaaggacgagcagctggcggcaaactatctcctagatcacatgaacgagttcgacgacgaggggccaccataagacacgcggatggaatacttgtcaagctcaaacctggtatcattggagcaaagggtttgtgacccgtagtccgtagagcaaaaggcttagtaaaacctttttattttattttatttttttgtggattcgtctccttctgttccttcttttctttcattagtctgtaattcttttcagtttggcttttactttcttgcgtacatactctagattaccttttttacagacttgataacggaggtataaaaaggttcagagcccgtctgcattc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0407200, RefSeq:Os09g0407200