Os08g0104100

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Revision as of 12:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0104100| Description = Conserved hypothetical protein| Version = NM_001067311.1 GI:115474358 GeneID:4344436| Length = 2771 bp| Definition ...")
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Gene Name

Os08g0104100

Description

Conserved hypothetical protein

Version

NM_001067311.1 GI:115474358 GeneID:4344436

Length

2771 bp

Definition

Oryza sativa Japonica Group Os08g0104100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:221487..224257

Sequence Coding Region

221873..221968,222053..222201,222836..222941,223997..224188

Expression

GEO Profiles:Os08g0104100

Genome Context

<gbrowseImage1> name=NC_008401:221487..224257 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:221487..224257 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgacgcggcgtcgtcggcgtcggcggcggagatggtggggcgcgcggtgggtgaggtgcgggaggcgctgaacgagcacgccgacgtggtggcggagctctttgggcgcgtctcctccgacctccgctccggattccgccccgccctcgactccttcctcggcttcttccacgccgtcgactggaaggaaccttggttgatcagcatgttaatttttcatgccattctgctgctggtaacaatcatctcaaggagaaatgtcaacttccaacttatcttgtcagctttaacattttctggtgtatttctcgctgagagaataaatacattcttagggcaacactggaagagcttctcaagccagaattattttgatccccaaggtctgttcatttcagttgtctggtctgggcccctccttttgataacgatccttattttggtgaacactcttgtcacactctgcctgctgatggtaagatggaaaagggcggagcttaggcaccgtgctcgtgaggttcgtaacaagcaggattga</cdnaseq>

Protein Sequence

<aaseq>MGDAASSASAAEMVGRAVGEVREALNEHADVVAELFGRVSSDLR SGFRPALDSFLGFFHAVDWKEPWLISMLIFHAILLLVTIISRRNVNFQLILSALTFSG VFLAERINTFLGQHWKSFSSQNYFDPQGLFISVVWSGPLLLITILILVNTLVTLCLLM VRWKRAELRHRAREVRNKQD</aaseq>

Gene Sequence

<dnaseqindica>2290..2385#2057..2205#1317..1422#70..261#gtcttctccgcaaccttggatcgatctcactcgcctctctctcgagtcttccttggactcgccggagagatgggcgacgcggcgtcgtcggcgtcggcggcggagatggtggggcgcgcggtgggtgaggtgcgggaggcgctgaacgagcacgccgacgtggtggcggagctctttgggcgcgtctcctccgacctccgctccggattccgccccgccctcgactccttcctcggcttcttccacgccgtcgactggaaggtcggtttctttcttatagccttcttgccccccatctgccctggatctacctgggatctaacttcccacttcaaccttttgctcctcaatcatcaagtaattaaataatgtaagaaaattcgttcccctgcctcgcgcgcatcaatatcagtatgatagattagacaagacaagtgaaaagcaatagggctacctgatacagtatatagttgagggcttatcaaagggagtagtgctagtttagcaaatgaatgacgacacccaccttgtgatgcttgctattcatccaaaatcccacaaaaaaagatgatgcatgcttcttgtgacggatctaactatataatttctatggcgataattctttgccccaatcaacaatattgagtgcctgtctttcctatgtacatgaaaccatcgatagatggagaaaactaatgagctttgggttttttacaagtgtactgtactgtgtagtcataccatgcttacggaatgacatatctaatctattttgttttcttcacaagcaaagaggtagccctctccctttccattatcataaacacaacgcaacagctctaacatctcagggaaattataaaataaaggaacatgtctaatcttctatcgggacgtgataccatacctgagttttcgcatgctttgcactgtcatgctatgttgctccatctatgccgacaggccatccgtgtaccatgttgctggggaaagcctccttgacccagtcaaccatacaccttgaatttctagttccttccttttctcaaaacaaggaatactaaatgaaagctaatataggtagttggaattgtaaaatgaataaccaactgcacactatccgtggtattaaagacaaacaaaattcagtggtgacccgaatactttgggtagtggatatccatattttgctacatctaatttgccttcacgtttaattgtctgtttcgtcaacctagcaaacatttagtaaatgcaatatctcatcgtatcaatttttatgtctgtgctataatctttattattcccttcatcaggaaccttggttgatcagcatgttaatttttcatgccattctgctgctggtaacaatcatctcaaggagaaatgtcaacttccaacttatcttgtcagctttaacatgtaagttttgatttgtcttggttgctgatattgtcctgcatggttctcctgcaattttataatgtttattgaatgcttatattcacataaatactattatccttttttcctatattctgctggtatcatattaaatgttatactctaccaaccataattgtcttgtttttatgtgctttctaacttaacgttttccctcaaatgtggatagaggttccctaaaaccataaaaaaaacaacatatttgtgtggagttctacctacttgcttaaatttaatgtaagtttctttagtggtagaaccttctgagttatacattggtaggaatattgaacaagttactggcgaattatgtcaattaatgcactgtaaacctttccagattcttgttccatgcagtagatgtgaagggcatgcattgctcttgtttcagctatcttcagcatgaattaactatatgttaggatgaatatctcaaccctagtttgcaagacgatagcggagcattagtgaaaattctctttcatattctgacacatgttattttgtacgtttcatcaattttaaagaatgaatttatttctggtatgctagcttactattttatttacctgctcttgttggtttggtgcagtttctggtgtatttctcgctgagagaataaatacattcttagggcaacactggaagagcttctcaagccagaattattttgatccccaaggtctgttcatttcagttgtctggtctgggcccctccttttgataacgatccttattttggtaagtgcatgtctcatccagttgatcatttctgtcttccatcccgtgcattgtgggcaactgtttcttgtcttgtttctgtaggtgaacactcttgtcacactctgcctgctgatggtaagatggaaaagggcggagcttaggcaccgtgctcgtgaggttcgtaacaagcaggattgatcttaagctacctgaaaagctgaaactacgctgtttggtggccagcagacaagttgcttcccttggactgttgatctaaccgaaggaatttttttgtgtgaacttaccatgtgtagacatgtagcagtcgttcacaaaaacagtgtttatttagggatcatttcacatttgaagaaatcatggccagaggcccagagcttgactcttttgcctgtagcttgtgtattcccacgcattcttgtttttcatgcgaaggcaggagtcgagttactgtatttgctgaaatatgtgtaatagggcaaatcctttttccattgagaatctggctccatgaatgacagggtattttgcaattgtaatacttattcaataactcattttgattt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0104100, RefSeq:Os08g0104100