BGIOSGA016141

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Revision as of 04:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016141| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016141, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA016141

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016141, complete gene.

LocusTag

OSIGBA0115A19.1

Ensembl Transcript ID

BGIOSGA016141-TA

Ensembl Protein ID

BGIOSGA016141-PA

Length

4927

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:13184835..13189761

Sequence Coding Region

13184835..13185053,13185159..13185362,13188193..13188365,13188450..13188552,13189423..13189761

Genome Context

<gbrowseImage1> name=IndicaChromosome04:13184835..13189761 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:13184835..13189761 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGGTGGCGGTGCCGCGGGTGAAGCTGGGCTCTCAGGGGATGGAGGTCTCGGCGCAGGGGCTCGGCTGCATGGGCATGTGCCCGGCCTTCGAGCCGCCCAAGCCGGAGGCCGACATGGTGGCGCTCATCCGCCACGCCATCGCCGCCGGCGTCACGTTCTTCGACACCTCCGACCTCTACGGCCCCCACACCAACGAGGTCCTCCTCGGCAAGGCGCTGCAGGGCGGCGGCGTGCGCGACAGGGTTGAGCTGGCCACCAAGTTCGGCAAGTTCTTCGCCGGCGGCAAGCCGGGGATCCGCGGCGACCCGGCGTACGTGCGCGCGGCGTGCGAGGGCAGCCTCCGGCGGCTCGGCGTCGATTGCATCGACCTTTACTACCAGCACCGCGTCGACAAGAAGGTGCCCATCGAGGTCACGATTGGTGAACTCAAGAAACTAGTTGAAGAAGGAAAGATAAGATATATTGGCTTATGTGAAGCATCGGCATCAACAATCAGAAGGGCTCATGCTGTACATCCTATCACTGCAGTTCAGCTTGAGTGGTCATTATGGTCTAGAGACGTCGAAGAAGATATAGTTCCAACTTGCAGAGAACTTGGAATTGGAATAGTAGCTTACAGTCCACTTGGTAAAGGGTTTTTTTCTAGTGGAGCTAAACTAGTGGATTCTCTACCAGACCATGATTTTCGCAAGCTTATCCCTAGATTTCAACCAGGTAATATCGAGAAGAATGCTGAAATATTTGAGCGTGTTAACGAAATGGCAGCCAGAAAAGGATGCACACCGTCACAACTCGCATTGGCCTGGATCCATCATCAGGGGCGTGATGTGTGCCCCATACCCGGGACAACAAAAATCGAGAATTTCAACCAAAATGTTGCAGCACTATCTGTGAAACTCACCCCTGCAGAAATGGCTGAACTCGAGTCTTATGCCAGCAATGTCCATGGCGACCGGTATCCTCTGATGATGGCTAACACTACTTGGCAGGACTCTGAGACCCCTCCCTTGTCGTCTTGGAAATCCGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MATVAVPRVKLGSQGMEVSAQGLGCMGMCPAFEPPKPEADMVALIRHAIAAGVTFFDTSDLYGPHTNEVLLGKALQGGGVRDRVELATKFGKFFAGGKPGIRGDPAYVRAACEGSLRRLGVDCIDLYYQHRVDKKVPIEVTIGELKKLVEEGKIRYIGLCEASASTIRRAHAVHPITAVQLEWSLWSRDVEEDIVPTCRELGIGIVAYSPLGKGFFSSGAKLVDSLPDHDFRKLIPRFQPGNIEKNAEIFERVNEMAARKGCTPSQLALAWIHHQGRDVCPIPGTTKIENFNQNVAALSVKLTPAEMAELESYASNVHGDRYPLMMANTTWQDSETPPLSSWKSE</aaseq>

Gene Sequence

<dnaseqindica>1..219#325..528#3359..3531#3616..3718#4589..4927#ATGGCGACGGTGGCGGTGCCGCGGGTGAAGCTGGGCTCTCAGGGGATGGAGGTCTCGGCGCAGGGGCTCGGCTGCATGGGCATGTGCCCGGCCTTCGAGCCGCCCAAGCCGGAGGCCGACATGGTGGCGCTCATCCGCCACGCCATCGCCGCCGGCGTCACGTTCTTCGACACCTCCGACCTCTACGGCCCCCACACCAACGAGGTCCTCCTCGGCAAGGTACGTACCTACCTCTCCACTGTGTCCCTGCCATTGCTCGGGTAGGGGTTGGGCTTAATTTGTGCATGCGCGAGCGCGCGCTGAAGGTGCTCGACGAAATGTCAGGCGCTGCAGGGCGGCGGCGTGCGCGACAGGGTTGAGCTGGCCACCAAGTTCGGCAAGTTCTTCGCCGGCGGCAAGCCGGGGATCCGCGGCGACCCGGCGTACGTGCGCGCGGCGTGCGAGGGCAGCCTCCGGCGGCTCGGCGTCGATTGCATCGACCTTTACTACCAGCACCGCGTCGACAAGAAGGTGCCCATCGAGGTCACGGTCGGTGCCCCTTCCCCTCTATGTTTGTGTTCCCTTTCTTTTATTTTGTTATATGTAAGTGAAACATCCATCTGTATCTGAAAGGGAATGTAGGTGGTGGTAGGTTGTTGTCAAGAGACATCTTTTATTGATGCCCCCTGCCCCCACCCCCAACACCCGCCAAACACACAAAAAAATCATTGGAAAAACTAATTGGAGGGAGGATTATGATGTTGCTGAAAACAAACTGTAAGACTCATTATTAGTAACGGCTCCGTGTCGCTCTCTAGGGCAGGGTCGAGCGGGCTGCCATAAACCGTGCGGCCACAAGAGCGGCAGCAGCGAGGCCTTCCTTTTCCGTGGTAGCGGGGTCGGAGCCCACGACCCCGACTAGCTCCGGGTGACGACAGCCATAATGGTGCTAGGATGGAGCTGCCGGCGTTAAAGAGGAGAGTGGCAGCGTCGATGCCTAGGTGGACCGGGGTGACGACGGCAAGGCGGCGCCACTGGATCTGGCATCGACTCCTATATCCAGCCCCGTCCTGGATGGATCCGGGCTCCCCGGTGCAGTAGGTCGGTCCCCAAGCCGGATGCGGTAGCAAGACAGCGGGGCACGGCTACGTGGATGCGGAGGCGTGAACGTGGAGGCCGCAGGGGTGCAGCTGCCAAATCTGGTCCCATCCCATCCGGATTTTGCCTCCTCGCCTTGGGAAGCTAACTCCCGAGCCAGCAACGATGACAAGGCGAAGGGGTACGGCTGCGTGGAGGTGGCGGGGCGAGGCAGTAAGGGCACGACGACGTGCCGTCGACAGAGGGCACGCTCGTGAAGTGCCGTCGGCGGGAGAAAGGTACTGGAAACACTGGTAGGGATAGGAGGAAGCGTGGTGCTAGTTGGGAGCAGCTGGTGGCGGTGGTAGGCCGACGCAGCGGCGCTAGGAGGCACGCCCGGCGGTGACGGGGCAATGGTGGGAGAGGTCAATGTGGGCGGGTCGGCGCAAAAGGCGTTAGGAGGTTGGCGTGCGCAACTGCAGGGAGGCTAGCCCAGCCGATGGCACGGTGGGAGGTCTACACGGTGACAACAATGAGGCCGGTGATGGTGGTGTGTGCCACAAGGCATGCCGAGGCTGACTGACCGGGGGTGGAAGGGGGGGTCGGTGTAGTATTGGCCACATGCCGATGGAGGATGGCTGGTGGTGGAGCAATGGAGTGATATCCGCGGATCGATAGGGAGTGCGTGGCAGGTGTAAAACCTAGCCCGGTCTTGCCAGCCGGCTGTGATGGCGTTTCGGACATCGTTTTCCCTCTTGGGTTCTGTCGCTTTTCTCCTTGGAGACGTCGTCTAGGAGGCCCCCCTGCTGAAACCTCTCTCTGATAGCTTGCGCGTGCTCTCTCTAGATGTTTATCCTCTTGCGGGCTTGCGGCAGCACCTAGCCAATGCAAGCTGACCATGTTGGTGGGCCTTGAGGGGGAGAGCGGTTCCCTCTCCCCTCCAATCCTTTTGATACGTATAGAGTTGAGTGTGTTGTTCACTTTTTAGGTTTTGGTTTTGGGCGGTTTGGTGGTAGCTACGCTAGCCTTTTCCTGGATCCTATATAGGCATCATCGGTGCGTGGTGGTGTTGTTTTTTTTCCTAGCTACTGCTTTCCAGGGTGCTAGCCTTTTTTTTTTCCTATTGTATTTAATGAATCATCGCACTTTGTGGTATTGGTCGTTAAAATAAAACAAAATGTAGGAGACGTCAATTTTGAAGGGAGGAAAATTTAACCCAGCTCGATGCACCCTTAAAATCCTACGTCTGTTTGGTTAATTGTACAATGACTTTTTGTTCCGGCAGCAACTTGGCCTGAATTCTGGAAGGCCAAATCAAGCTCCATTTTCTGGCACCTGTCCTTTTGTCGTTATTTTTTTAACCTCATGTATTAAATTTTCATTGTAATAAGCTATTATTTTTCATTGTAATACCAAAATGAAGCATATATTTCTTTTTGTTTTTTCATAACAAGTGTTTGAATCATACATTTATAAAGGTATGAAGTACAATATTATTTGCCTTAAGATCTCTCTGTTTAGCACAAATGCGTGAAAAATATCTTATGAATATCTTCCATTGTAACTGTCATGTCACTGGGCAGTTACAGTACTCCCTATGTGACAGATGGTTTCTATAATTTAACAATGTTTTCTTTCCCTTTATGTATTGCATTTTTTTTTAGATATAGGGCAGGGTTTCAATTTTTAGACATTAGCTGTGGGATTTTGAAGGGTAAAGAACATAAAGTAAATTCACTGACATATCACTGGGAAGTTACAACACACATTGTGGTTGTTGTAATAGCTGGGATCTTAACCACCACCAACCAACCCAACATTTCAAAGTTTAACAATCGAAAAACCAATGAAGAAATACATGAACCAAAATATATCTTCAGTGAAGAAGACTTCTTTTCTTTCAGAATATTTAACTACAAACTAGCAATAGTTATTAGAACATATCCACCAACACATGCATTTTCATCATTTTGGTGTGCTATATCTTTTTGATAGCGCATAAGAGGTAGCACCTGAACTGCTATTACTCCTGATATTTTCGAATCGTTGCATGTAATTATTGTGTATAAACTGAACTATCTTTTATTTTTGTCCTGAGAACCATGCACTTTTTTTAAGTAATAATCTTTCTTCTCAAGATTATCTAGTTGTTTTGCCTTTCTTTACAAATATAATCGTTGCATGTAATTATTGTCTATAAACTGAACTATCTTTTATTTTTGTCCTGAGAACCATGCACTCCTTTTAAGTAATGACCTTTCTTCTCAAGATTATCCAGTTGATTTCCCTTTCACATTGTTAGATTGGTGAACTCAAGAAACTAGTTGAAGAAGGAAAGATAAGATATATTGGCTTATGTGAAGCATCGGCATCAACAATCAGAAGGGCTCATGCTGTACATCCTATCACTGCAGTTCAGCTTGAGTGGTCATTATGGTCTAGAGACGTCGAAGAAGATATAGTTCCAACTTGCAGGCATTGAAAAAACAAATTAGTTTGTCTGTTGAGAAAAAAAAATCACATGCTGCATTTTAACTATTTTTCTAATTTTCATTTCAGAGAACTTGGAATTGGAATAGTAGCTTACAGTCCACTTGGTAAAGGGTTTTTTTCTAGTGGAGCTAAACTAGTGGATTCTCTACCAGACCATGATTTTCGCAAGGTATATTTCCATGATTACTAATCACTCAGTTTTCCCTAAGAATGGCTTTGAAGGAGGTCATTAAAATAGCAGAACGGGTTAGGGAAAATGCTGTGATACCTGTCGTGTTAATGTCTTTTAGAATAAGAAGAACAGAAATTAATTTGTTTCCTTTCTTGAAACAAATCTTGTTTATGAGTTTACTCATACATAGAGTAGAAATGAATGATTAATGTAGGAAAAACGAGAAGAAAGATCATTAAATAGGCATTCAGACCTTAGAGCACCCGCAAGGGTAAAGTAAGGTGCTATCTATAAAACATGTACATCTCAGCAATAGACTCGATTAATAGTAAACCACCTTAATAGTATGTCTACATTGGTATCTATAGCTCTCTCATGCATTGTCTCGTTTTTCTCTATAGACTATCTCTAAGTTAGTAGATAGCTTTGCTCTCTCTCTTCATTTAATACATTCCAAGTAGGAAAATATGCTGACATGGATCTCTTGTAGAGAGCCTATAGATAATCATTGTGGGTGCCCTTATATTTTGAAACCTTGTAACATAATTATATGCCTTGTTGTTTGGATGATGGGAGTAATTATTATATATGTACCTTCTTCTGTATTCTCATTTTCTGTACTTCTGCATCGGTAGTACAAATTACACTTATGTTCGGTAGTACAAATTACACTTATATGTAGAGCAAATTACATTTATGTTCATTAGAAATTTTTACTTTGTATTGATCAGACATAAGCCTTTTCCAATTAAGCTAATCTTTGTGCTGCATATTCACGTCTCGTCTATTTAGTCTTTGAAAAATGAAGTAGAACTATAATGAATTCTCATTCAATTAACTAACAACTTGTATTGGTGCCTTTTGCAGCTTATCCCTAGATTTCAACCAGGTAATATCGAGAAGAATGCTGAAATATTTGAGCGTGTTAACGAAATGGCAGCCAGAAAAGGATGCACACCGTCACAACTCGCATTGGCCTGGATCCATCATCAGGGGCGTGATGTGTGCCCCATACCCGGGACAACAAAAATCGAGAATTTCAACCAAAATGTTGCAGCACTATCTGTGAAACTCACCCCTGCAGAAATGGCTGAACTCGAGTCTTATGCCAGCAATGTCCATGGCGACCGGTATCCTCTGATGATGGCTAACACTACTTGGCAGGACTCTGAGACCCCTCCCTTGTCGTCTTGGAAATCCGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016141