BGIOSGA016143

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Revision as of 04:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016143| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016143, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016143

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016143, complete gene.

LocusTag

OSJNBA0008A08.11

Ensembl Transcript ID

BGIOSGA016143-TA

Ensembl Protein ID

BGIOSGA016143-PA

Length

2890

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:13214424..13217313

Sequence Coding Region

13214424..13214657,13214768..13214968,13216080..13216252,13216337..13216439,13216969..13217313

Genome Context

<gbrowseImage1> name=IndicaChromosome04:13214424..13217313 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:13214424..13217313 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGCTGCTGCTCCGGCGACGGCGGCGGTGCGGCGCATGAAGCTGGGCTCGCAGGGTCTGGAGGTCTCGGCGCAGGGGCTGGGATGCATGGGCATGTCCGCCTTCTACGGCCCGCCCAAGCCGGAGCCCGACATGGTGGCGCTCATCCACCACGCCGTCGCCGCCGGCGTCACCCTCCTCGACACCTCCGACATCTACGGCCCCCACACCAACGAGCTCCTCCTCGGCAAGGCGCTGCAGGGCGGCGTGCGTGATAAGGTTGAGCTGGCCACCAAGTTCGGCATCGCGTTCGAAGACGGCAAGCGGGGCGTCCGCGGGGACCCGGCGTACGTGCGCGCGGCGTGCGAGGGCAGCCTCCGGCGGCTCGGCGTCGACAGCATCGACCTTTACTACCAGCACCGTGTCGACAAGAAGGTGCCCATCGAGGTCACGATTGGCGAACTCAAGAAACTAGTTGAAGAAGGAAAGATAAAATATATTGGGTTATCTGAAGCATCTGCATCAACTATCAGAAGGGCTCATGCTGTACACCCTATCACTGCTGTTCAGCTTGAGTGGTCATTATGGTCTAGAGACGTGGAAGAAGATATAATTCCAACTTGCAGAGAACTTGGAATTGGAATAGTAGCTTATAGCCCACTTGGTAGAGGGTTCTTTTCTGCTGGAGCTAAACTAGTGGAGTCTCTATCAGATCAGGATTTTCGCAAGCATATTCCTAGATTTCAACAAGAGAATCTTGAGAAGAATGCTGAAATATTTGAGCGTGTTAACGCAATGGCAGCCAGAAAAGGATGCACACCGTCACAGCTCGCATTGGCCTGGGTCCATCATCAGGGAAGCGATGTATGCCCCATACCTGGGACAACAAAAATCGAGAATTTAAACCAAAACATTGGAGCACTATCTGTGAAGCTCACACCTGAGGAAATGGCTGAACTCGAGTCTTACGCAAGCACAGATGATGTTCGAGGCGACCGGTATCCTCAGGCGATGGCCAACACTACTTGGCAAAATTCTGAGACCCCTCCCTTGTCATCTTGGAAAGCTCAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAAAAPATAAVRRMKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMVALIHHAVAAGVTLLDTSDIYGPHTNELLLGKALQGGVRDKVELATKFGIAFEDGKRGVRGDPAYVRAACEGSLRRLGVDSIDLYYQHRVDKKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEDIIPTCRELGIGIVAYSPLGRGFFSAGAKLVESLSDQDFRKHIPRFQQENLEKNAEIFERVNAMAARKGCTPSQLALAWVHHQGSDVCPIPGTTKIENLNQNIGALSVKLTPEEMAELESYASTDDVRGDRYPQAMANTTWQNSETPPLSSWKAQ</aaseq>

Gene Sequence

<dnaseqindica>1..234#345..545#1657..1829#1914..2016#2546..2890#ATGGCAGCTGCTGCTCCGGCGACGGCGGCGGTGCGGCGCATGAAGCTGGGCTCGCAGGGTCTGGAGGTCTCGGCGCAGGGGCTGGGATGCATGGGCATGTCCGCCTTCTACGGCCCGCCCAAGCCGGAGCCCGACATGGTGGCGCTCATCCACCACGCCGTCGCCGCCGGCGTCACCCTCCTCGACACCTCCGACATCTACGGCCCCCACACCAACGAGCTCCTCCTCGGCAAGGTACGTACCTACTTTCCTCCTGTCCTGCCCGCTCTCTTGCTTCTTTGGGTTTGTTTGTGAGAGTGCGCTCAAGGTGCTCGGCGGAATGCCTGCTTGGATCGGAACGGCAGGCGCTGCAGGGCGGCGTGCGTGATAAGGTTGAGCTGGCCACCAAGTTCGGCATCGCGTTCGAAGACGGCAAGCGGGGCGTCCGCGGGGACCCGGCGTACGTGCGCGCGGCGTGCGAGGGCAGCCTCCGGCGGCTCGGCGTCGACAGCATCGACCTTTACTACCAGCACCGTGTCGACAAGAAGGTGCCCATCGAGGTCACGGTGAGTGCCACTTCCCCTGTCTCCTATCCTTCTTTCTTTTAGAAAATTTTGTGATGTGTGGATGCAAAAGATACACGTGTATCTGAAAGGGAAAGTAGGTGGTGGTGGGTTGGTTTGTCAATGGGTTGGTGTCAATATTCTACAATAATTATTAGGACAGCTGCCGGAAAAATGGACATCTTTTATTGATGAAAAGCAAAAAAGAAAAAAAAAAAGGAGCATTTGTTTGTTACCCACTTATCTAGATGATTAATTTCATATTCATTGGGAAAACTTACTAGAGGGAGGATCATGAAGTTGTTGAAATTTTTTTTAAGAGAGGTCAATTTTGAACAGAGGAAATTTTAACCCAGCTTAAGGTACACTTAAATTCTTAAGTTTGTTTGGCTGTTTGTACATTGACCTTTCTTTTATTCAGACCAATTTGGTATGAGTTCTGAAAGGACAGGGTATGTAATGGAGAGAAAGGATAAAAGGAACCTCCATTTCATGGCACCTATCCTTTTATTGTTGTTTTTCTACCTCATCTTAGGGCTGTACCAATTAAATTTTGACTAAACATACTAGGGCATTTGTAAAGATACGTGGTACAATATTATTTGCATTAAGATCTTTCTGTTTGGCATAACTCCCTATTTGATCGCTGGTTTCTATAATTCAAAAATGTTTTCTTCTATTTAAATATTATACTTAGTTTAGATATATAGTATTTCATTTACTCTAGACATTAGCTGTGAAATTTTGATGGGTGACGAGGCAAATTAAAGATTGAGCCAATAATTTTCATTTACATGTCACTGGGCAGTTACAACACAGAATGCTGTTTTTGTAATAGCTTGGGATCTGAAGCACCAAGTAAACCAATATTTCAAAGTTTAATAAACCAATGCACAAATATCAAAATAAGTAAACATGAGAGGACTGAAAATTTGTGCAAATATGTTTGCTGAAGAGGACTCGTTCTCTTTCTGAACATCTAACTACAAACTAGCAAAATTTACTATAACATTTTGATAATGTGTTTTGATTATTTTGGCATGCTATAAACTGAACTACCGTCCATTGTATTTTTGTCAAGTTTATCTAGTTGATTTACGTTTTACATTGTTAGATTGGCGAACTCAAGAAACTAGTTGAAGAAGGAAAGATAAAATATATTGGGTTATCTGAAGCATCTGCATCAACTATCAGAAGGGCTCATGCTGTACACCCTATCACTGCTGTTCAGCTTGAGTGGTCATTATGGTCTAGAGACGTGGAAGAAGATATAATTCCAACTTGCAGGTATTGAAAAAAACACCAAATTAGTTTGTCTGTTGAAGAAAATCACATGCTCCATTTGAACTATTGTTCTTATTTCCATTTCAGAGAACTTGGAATTGGAATAGTAGCTTATAGCCCACTTGGTAGAGGGTTCTTTTCTGCTGGAGCTAAACTAGTGGAGTCTCTATCAGATCAGGATTTTCGCAAGGTAAATTCCATGGTTTACTACTTAGTTTTTCCTAAGAATTGGGATGAATGAGGTCATGAAAATAGCAGAGCATGACAGCGAAAACACTGTGATATCTGTAGTGTTATTGTCTTTCAGATTAAGAAGAATAGAATAATTAATTTATTTCCTTTCTTGAAACCAATTTTGTTGGTGTGTTTACTCATACATCGTGTAGAGATGAATGATCAATGTAGAGAAAAACAAGAAAAAGATCATCAAATAGGCATTCATGCCTTATATTGGGAAACCTTCTAGTTTAATTCTATGCCTTATAGTTTGAATGATGGGAATACCCATTAAGTACCTCTTCTGTATTCTCATTTTCTGAACTTTCTACATTGGTAACACGAAATACTTATGTTCAATAGAAATATTTACTCTGCATTTATCGGACTCAAACCTTTATTAAACTCATCTTTGTGCTGTGTTGTCTATTTGTTCTTTGAAAAATTAAATAGAACTACAATGAGTTCTCATTTACTAAGAACTTGTATTGATACTTTTGCAGCATATTCCTAGATTTCAACAAGAGAATCTTGAGAAGAATGCTGAAATATTTGAGCGTGTTAACGCAATGGCAGCCAGAAAAGGATGCACACCGTCACAGCTCGCATTGGCCTGGGTCCATCATCAGGGAAGCGATGTATGCCCCATACCTGGGACAACAAAAATCGAGAATTTAAACCAAAACATTGGAGCACTATCTGTGAAGCTCACACCTGAGGAAATGGCTGAACTCGAGTCTTACGCAAGCACAGATGATGTTCGAGGCGACCGGTATCCTCAGGCGATGGCCAACACTACTTGGCAAAATTCTGAGACCCCTCCCTTGTCATCTTGGAAAGCTCAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016143