BGIOSGA016145

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Revision as of 04:25, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016145| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016145, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA016145

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016145, complete gene.

LocusTag

OSIGBA0115A19.6

Ensembl Transcript ID

BGIOSGA016145-TA

Ensembl Protein ID

BGIOSGA016145-PA

Length

4954

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:13251617..13256570

Sequence Coding Region

13251617..13251881,13252049..13252427,13252887..13253111,13253239..13253374,13255249..13255500
,13256274..13256570

Genome Context

<gbrowseImage1> name=IndicaChromosome04:13251617..13256570 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:13251617..13256570 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGCAATCGACAGAATGGATGAGGGATAGGGCCGACAAATTGAAAGAGGATGTATGCACACTATTTACACCCACTAAGGACATCTTAAGGAGGATGTACTTAGTAGATGAAATAGTGCATCTAGGAATCGATCACCTCTTTGAAAAAGAGATTGAAACTGCATTAAAAGACATACATGAAACCGAATTCACTAGCTCTAACCTTCACGAGGTTGCTCTACGGTTTCGTTTGCTTAGGGAGCGTGGGTTTTGGGTATCTCCAGATATATTCAACAAATTCAAAGGAGATGATGGTAATTTCTTAAATGAATTTGCTGAAGACCCAAGGAGCCTACTATCTTTATACAACGCAGCCCACCTCTTCATACATGGTGAGCCAGAACTCGAGGAAGCTATTTCTTTTGCAAGGAACCATCTCGAATCAATGAGTTCGCATAGTGTTTTGAAGGCCCCTTTAGCTGATCAAGTGAAGCGGCATCTTCGCTTGCCACTGCCAAGGACTCACAAGAGAGTGGAGATGCTACATTATATGTTTGAGTATGACCAAGAGAATGAGCACAATCCGGTTCTTCTTGAACTAGCAAAGTTGGATTTCAACCTACTGCAGCAGGTTCACTTGAAAGAGCTCAAGGAAATTTCTAGGTGGTGGAAAGATGTTTTGGCATATATGGGTCTAGACCATATCCGAGACCGTGTGATCGAGTGCTACACCTGGTCCTATGCTGTATACCACGAGAAAGACTTGGCACTTGCACGAATGATCTTTGCTAAGCTAGTCGCGCTAACTTCCGTATTGGATGACACATACGATGTCCATGCGTATACCTCCATCGAAGAGTGCCGGATGCTAAACGTAGCCATTCAAGGATGGGATGACAGCGCTGCCTTGCTTGTACCAGAGTACCTGAGAAAGTTTTATGAAATAATCTTGAGGACCTTTAGGGAGTTTGAGGATCAAATACCAAGAAATCAGAGGTACCTTGCTGCTTTCTCCAAGGCAGAGTTCCAAAAGCTGACCAGTAATTACCTGGAAGCAGCGGAATGGTACCACCGGAATCACAAGCCGAGCTTCAACGATCAGGTGGCTCTGGGAACCGCAACCACAGGCACAAGATCGCTTGCTGCCGGCCTAATGCTTGGCATGGGTGATGCTGCAACAACAAAACAAGCATTCCAGTGGGCTGTTACTAGCACTGACGCCATCATCTCCTGTGGAAAAATTGGGCGTTTAATGAATGACATTTCTGGATTCAAGCTTGGGTCGCAGAACAAAGCTGACATGGCATGCGCAGTCGAGGCCTACATCGAGGAGCACAAGGTCACAGCCGACGTCGCCATCGCCAGGATAAACGAGGTGTTGGAGGACGAATGGAAAACAACCAACCAGGCTCGCGTCGACCACCGGGCTGTTCTTCCTGTGGTGCAGCGTATGATCAACATCACGCTGGGCATCCAGTTGTTCTACGGCAACGACTGTGATGCTTTCCCGTTCGGCAAACAGCTTCAGGAGGTTCCTGAGGATCTCTATGTCAAGCCCATGTCCTTATTATAG</cdnaseq>

Protein Sequence

<aaseq>MQQSTEWMRDRADKLKEDVCTLFTPTKDILRRMYLVDEIVHLGIDHLFEKEIETALKDIHETEFTSSNLHEVALRFRLLRERGFWVSPDIFNKFKGDDGNFLNEFAEDPRSLLSLYNAAHLFIHGEPELEEAISFARNHLESMSSHSVLKAPLADQVKRHLRLPLPRTHKRVEMLHYMFEYDQENEHNPVLLELAKLDFNLLQQVHLKELKEISRWWKDVLAYMGLDHIRDRVIECYTWSYAVYHEKDLALARMIFAKLVALTSVLDDTYDVHAYTSIEECRMLNVAIQGWDDSAALLVPEYLRKFYEIILRTFREFEDQIPRNQRYLAAFSKAEFQKLTSNYLEAAEWYHRNHKPSFNDQVALGTATTGTRSLAAGLMLGMGDAATTKQAFQWAVTSTDAIISCGKIGRLMNDISGFKLGSQNKADMACAVEAYIEEHKVTADVAIARINEVLEDEWKTTNQARVDHRAVLPVVQRMINITLGIQLFYGNDCDAFPFGKQLQEVPEDLYVKPMSLL</aaseq>

Gene Sequence

<dnaseqindica>1..265#433..811#1271..1495#1623..1758#3633..3884#4658..4954#ATGCAGCAATCGACAGAATGGATGAGGGATAGGGCCGACAAATTGAAAGAGGATGTATGCACACTATTTACACCCACTAAGGACATCTTAAGGAGGATGTACTTAGTAGATGAAATAGTGCATCTAGGAATCGATCACCTCTTTGAAAAAGAGATTGAAACTGCATTAAAAGACATACATGAAACCGAATTCACTAGCTCTAACCTTCACGAGGTTGCTCTACGGTTTCGTTTGCTTAGGGAGCGTGGGTTTTGGGTATCTCCAGGTATTTCTCTACTTAGTTAATGGATTGTGCATAGTTATTTTGGAACTGTTCATTACTACGACGATTGAGGACCATATATATATAAATGTTCAAAAGAGATTGCGAATAACGTGCCTAGCTAAACCTTGGAACTTCACAAACATTTTTATATCAAATCTCACATGCAGATATATTCAACAAATTCAAAGGAGATGATGGTAATTTCTTAAATGAATTTGCTGAAGACCCAAGGAGCCTACTATCTTTATACAACGCAGCCCACCTCTTCATACATGGTGAGCCAGAACTCGAGGAAGCTATTTCTTTTGCAAGGAACCATCTCGAATCAATGAGTTCGCATAGTGTTTTGAAGGCCCCTTTAGCTGATCAAGTGAAGCGGCATCTTCGCTTGCCACTGCCAAGGACTCACAAGAGAGTGGAGATGCTACATTATATGTTTGAGTATGACCAAGAGAATGAGCACAATCCGGTTCTTCTTGAACTAGCAAAGTTGGATTTCAACCTACTGCAGCAGGTTCACTTGAAAGAGCTCAAGGAAATTTCTAGGTACTAATATGAATGCTAACTTTAATTTGTTATTTTGAATAAAATAAAATCAAAGGCTAAGACAATTCATGGTGTACGAAATTAATGAAAGAAATATGCAATAATTAAAATCAATAAAAATGGTAATCTATAATATAGTCTAGAACAAAAGATTTGATGACCATTACTGCAAATAGCTATAACTGTCAGTTGATTTAGAAAAGATATACTCCTTAATTACTACTTACGTGCACCGTATAGAGTGTGTTGCAGTTTTTATAGAATAAATGATCTAATAACACAAGCATAAGTTTCGCGGAACATGAATTATGTTTTCTATATAGAAAAAGAAAATAACCTGAACATTAATATAACTTTTATTATATGATACATGTACCGTGCTATGCTACGACCTTTAACTGTTTGTGTGTATATATTTAAGAACCTGAAAGTAATAACTAGTATTAATTTTTTTCTCAGGTGGTGGAAAGATGTTTTGGCATATATGGGTCTAGACCATATCCGAGACCGTGTGATCGAGTGCTACACCTGGTCCTATGCTGTATACCACGAGAAAGACTTGGCACTTGCACGAATGATCTTTGCTAAGCTAGTCGCGCTAACTTCCGTATTGGATGACACATACGATGTCCATGCGTATACCTCCATCGAAGAGTGCCGGATGCTAAACGTAGCCATTCAAGGGTTGGACACTTCATTAATTTTTATGCATCCAATTAATCTTAATTTTTGGATAATTAATTAAATTTCCCCTGACGTAACTGCTAGATTATTTAATCCTGCCCTGACTAATAATGTTATACCGTTCCAGATGGGATGACAGCGCTGCCTTGCTTGTACCAGAGTACCTGAGAAAGTTTTATGAAATAATCTTGAGGACCTTTAGGGAGTTTGAGGATCAAATACCAAGAAATCAGAGGTACCTTGCTGCTTTCTCCAAGGCAGAGGTATAACTCACTCCCTCTTTACTTCTGACCCAGAAAAAAACTTAGACCGTCCTTGTTTATTTACTCTCACCTTTGATGACCAATATTTTAACTTTGACCGTTACTCCCTCCATCCCATAATATAAGGGATTTTGGGTGGATGTGAGGACAGATGGAGTAATTAATAACCTTCAAACAATCAATATATGATTAATCAAAATTAATCATATATTTTAATTTGATGAATGACGTATCGTAGGGTGGTGTATACTTTAGGAAAAAGTATGAATTACCCCGTGAACAATCGTGGTAGACCGAATTATACCCTGAACTCGAAAATTGGACATTCGATACCCTCAACTATTGTTTTGAATGGTTTTGACTTGAAATTACACACGTGGCACCAACGTGGCAGCCCAGTCAGCAAAACAAAAAAAACTGGGCCCACTTGTCATACTTCTCCCTCAATCCCCTCAACCCAGTCCCTTCACATTCCCCCCTGCTCTCTCTTGCCACGTGCTCGGTTGGCCGGTGGTGGAGGAGAACCACGCCCGAGCGGGTGGAGGAGGCGGACCGGGCAGCCGGCGACGGATGCGGACCTCGCCTGGGCAGTGGGCAACTAAGGTGGAGCTCGCCCGGGCAGCTGGTGGCGGAGGCGGACCCGACGACCGACAGTGAATGCGGATCAGGCTATTGACGACGGAGGCGGACTAGGCAGCCAGCGGCGGAGGTGTAGCTCAGCTGGTGCCTTAGATCCAGAGCCCGCCGTGGGCCGGTGGGGGACGAGGGTGACGGCGATGAGGTCAGTGCTGGCATAGGAGGAAGCAGAGCCCTGGGAATCAAGGCGACGGTCCTGACAGCAATGACGAGTGGGCTCAAGCTCCTCCTCTCAAGCCATGGCACTACCGAGCTCCTCCTCCTCGAGTTCCCTCCCTTGGTTGTGAGCTCCACAACTCTCCTCGCTAAGCTCGAGCTCCGCCTAGTGCGAGTCCACGTGCACGTGGCTCCGGCAACAAGCACCCCCTTCTCCGAGCGACGGCAAACCACCACCACGGCACCAAGCCACCCCTCTCCTTCTTCCTGCCTCCACTCAGGCATGAATCCCATCCCCTTTTGTTGAGCTCAGAGAAGACGGGGTCAGCAGCGAGCTTGATGTAACCGGGGCGGCATCCAACTCCATGGCAGCATCGAATCAAAGCAATCCCCTTGCTGAGGTCAAGGAAGATGGAGTCGTCGGGGTGGCCTCATGCCCATGACGAGCTCCACGGAGACGGATCCGCATAGGTTGCCATTGGTAGAGCGCCGGCGGCAGCAGCAATAGCTAGCCGAGCTCGTGGAGCCCCTTCCTCCCCCTCCCTGTTGGATTGGCCCTGGCCACCGGTGCTCTCTCCTCTGCTCACCGAGAGAGAGAGGCTGAGAAGGAGGGAAAAAAAAGAGACGCTGACAAGTGGGCCCCATTGTTTTTTATTTGTTTTCTGACTGTATCGCGACGTGTGTGCCATATAGGCTGAAAACCGTATCGAATAGAGTTACAATGGTAATTTGTCCGGTTTTAAGAGTTTGGGGTGTCAAATGTTCTGTATTGTAGTTTAGGGAGTAAATCGTACTATTTCAATATTTCGGGAGATAAATTATGGGGTATATATACAATACAGTACATATGTCCGCGATAGAAGAAGTATTTGAAAGTGTTTTAAACCAGAGGGAGTAGCATAAAACCTGCTGCATATATATACTAATTTTTATTGTATATTTTGTAGTAATGAATAGTATTGGAGCAATTGATATCAATTAGTAGTACGTACTATATATTTACATATCTATCTATGCAGTTAGTTTTGTTTCGTGAATACATTTGAATCCTTAATTTACTAGCTTGCATGTGTGCATGCCAGTTCCAAAAGCTGACCAGTAATTACCTGGAAGCAGCGGAATGGTACCACCGGAATCACAAGCCGAGCTTCAACGATCAGGTGGCTCTGGGAACCGCAACCACAGGCACAAGATCGCTTGCTGCCGGCCTAATGCTTGGCATGGGTGATGCTGCAACAACAAAACAAGCATTCCAGTGGGCTGTTACTAGCACTGACGCCATCATCTCCTGTGGAAAAATTGGGCGTTTAATGAATGACATTTCTGGATTCAAGGTAACAGAGAGAGTTGAATTAATTTAATTTACTGCTGGAGTAGTATTTTACTAGTTACCAAGTAATTAATTAATCTCAATTTAGAACTCCATGTCAACGAGAGAGCTAGCATCAGGTTTGACAGAATTTTCCACTTAACATAACGCTCGGAGATATCTTAGGCTAGTGTGTAAGGACATGCATGTTTGACACGGCTAGCTTCGAATCCAATTTTTTTAAAAGCTAGATATTTTGATTGCTATCTAGCTCTAGAAATCCATAGAGCTTTAACTATGTCGATAGCATTTGAATTAATTATCCTTTTTCTTGCCATTTTCAAATCCGGTCCTTATTGAGAAATATATATAGCTTTCAAAACATGGTGTATTTGTTTCTGAAATAAAAAAACGCAAGTACTCCCTCCGTCCCAAAATATAACAACTTTTAGCTCTCAAGATTTGTCCCAAAATATAACAACTTCTCCACTAATCCCTAACCAATCACAACCCCCACCATTCAATTTTTCCACTTAACTCCACTACTCAACCAATAATAACTCTCCACCATTCACTTATATATACTTTCTTAATAACTGTGCCAAACTCTAAAAATGCTTATAATATGGGACGGAGGGAGTATAAGGGAAGGACCTAATATTAAATAAATAAAAGGGGAGAGGCTTCGAACCCAGGCCGTACCACCTTATGAGAACTCTGGCCGTTTCTCTATTTCTTTCTGAAATATAACTGTTTAATTATTAATCACTATTCATTTATACGGATGCGCATATGCAGCTTGGGTCGCAGAACAAAGCTGACATGGCATGCGCAGTCGAGGCCTACATCGAGGAGCACAAGGTCACAGCCGACGTCGCCATCGCCAGGATAAACGAGGTGTTGGAGGACGAATGGAAAACAACCAACCAGGCTCGCGTCGACCACCGGGCTGTTCTTCCTGTGGTGCAGCGTATGATCAACATCACGCTGGGCATCCAGTTGTTCTACGGCAACGACTGTGATGCTTTCCCGTTCGGCAAACAGCTTCAGGAGGTTCCTGAGGATCTCTATGTCAAGCCCATGTCCTTATTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016145