BGIOSGA016147

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Revision as of 04:25, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016147| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016147, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016147

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016147, complete gene.

LocusTag

OSJNBA0032I19.9

Ensembl Transcript ID

BGIOSGA016147-TA

Ensembl Protein ID

BGIOSGA016147-PA

Length

3479

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:13315991..13319469

Sequence Coding Region

13315991..13316437,13318306..13318478,13318854..13318956,13319125..13319469

Genome Context

<gbrowseImage1> name=IndicaChromosome04:13315991..13319469 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:13315991..13319469 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCAGCAGCAGCGACAGCTCCGGCGGCAGCGGTGGTGCGGCGAATGAAGCTGGGGTCGCAGGGGATGGAGGTGTCGGCGCAGGGGCTGGGCTGCATGGGCATGTCGGCGGTGTACGGGGAGCGGAAGCCGGAGGCCGACATGGTGGCGCTCGTCCGCCACGCCGTCGCCGCGGGCGTCACCTTCCTCGACACCTCCGACGTCTACGGGCCGCACACCAACGAGGTGCTCGTCGGCAAGGCGGGGGCGGCGGCGGCGGCGACGGAGGAGGAGGTGCAGGTGCAGGTGGCCACCAAGTTCGGCATCACGCCGGCGTGGGAGGTGCGCGGCGACCCGGCGTACGTGCGGGCGGCGTGCGAGGGCAGCCTCCGGCGGCTCGGCGTCGGCTGCATCGACCTCTACTACCAGCATCGAATCGACTCCACGGTGCCCGTTGAGATCACGATGGGTGAGCTGAAGAAGCTGGTTGAAGAAGGCAAGATCAAATACATTGGATTATCTGAGGCCTCTGCGTCGACGATAAGGAGGGCTCACGTGGTTCATCCGATCACCGCAGTTCAGATCGAGTGGTCACTGTGGTCAAGGGATGTCGAAGAAGACATTGTTCCAACTTGCAGAGAACTTGGCATTGGAATTGTGGCGTACAGCCCGCTAGGGAGAGGGTTCTTCTCCAGTGGAGCTAAACTGGTCGATGAACTTCCTGACGACGATTTCCGCAAGAGCCTACCTAGATTCCAGCCAGAGAACCTCGAGAAGAACGCGGCGATATTCGAGAAGGTTAATGCCATGGCAGCGAGAAAGGGATGCACATCGTCGCAGCTCGCACTGGCCTGGGTTCATCACCAAGGGAGCGATGTCTGTCCCATACCAGGAACCACAAAGATCCACAACTTCGACCAGAATGTGGGAGCACTGTCAGTGAAGCTCACACCTGACGAGATGTCTGAACTTGAGTCGTATGCTTCAGCTGACGTTGTGCAAGGTGACAGGTATCATGGTACTTTTCTGAACACCTGGAAGAACTCTGAAACTCCTCCGCTGTCATCGTGGAGATCAGGCAATTAA</cdnaseq>

Protein Sequence

<aaseq>MAAAAATAPAAAVVRRMKLGSQGMEVSAQGLGCMGMSAVYGERKPEADMVALVRHAVAAGVTFLDTSDVYGPHTNEVLVGKAGAAAAATEEEVQVQVATKFGITPAWEVRGDPAYVRAACEGSLRRLGVGCIDLYYQHRIDSTVPVEITMGELKKLVEEGKIKYIGLSEASASTIRRAHVVHPITAVQIEWSLWSRDVEEDIVPTCRELGIGIVAYSPLGRGFFSSGAKLVDELPDDDFRKSLPRFQPENLEKNAAIFEKVNAMAARKGCTSSQLALAWVHHQGSDVCPIPGTTKIHNFDQNVGALSVKLTPDEMSELESYASADVVQGDRYHGTFLNTWKNSETPPLSSWRSGN</aaseq>

Gene Sequence

<dnaseqindica>1..447#2316..2488#2864..2966#3135..3479#ATGGCGGCAGCAGCAGCGACAGCTCCGGCGGCAGCGGTGGTGCGGCGAATGAAGCTGGGGTCGCAGGGGATGGAGGTGTCGGCGCAGGGGCTGGGCTGCATGGGCATGTCGGCGGTGTACGGGGAGCGGAAGCCGGAGGCCGACATGGTGGCGCTCGTCCGCCACGCCGTCGCCGCGGGCGTCACCTTCCTCGACACCTCCGACGTCTACGGGCCGCACACCAACGAGGTGCTCGTCGGCAAGGCGGGGGCGGCGGCGGCGGCGACGGAGGAGGAGGTGCAGGTGCAGGTGGCCACCAAGTTCGGCATCACGCCGGCGTGGGAGGTGCGCGGCGACCCGGCGTACGTGCGGGCGGCGTGCGAGGGCAGCCTCCGGCGGCTCGGCGTCGGCTGCATCGACCTCTACTACCAGCATCGAATCGACTCCACGGTGCCCGTTGAGATCACGGTGAGAGCAGCTGATCACGAGATCCTAGATCCTATGTATTGTATTGTAGAGGGTAGGATTTAAACATATACTTTACTAAGGTTGTGTTTAGTTTACGCTTAAATTGGAAATTTGGTTGAAATTAGAACGGTGTAAGGTCATGTTTAGTTTCTAAAACAAAAACTTTTTACCCATCACATCGAATGTTTGGACACATGCATAAAGTATTAAATGTGGATAAAAAAACCAAATATACAGTTTGTGTGTAAATTGCGGGACGAAACTTTTAAGCCTAATTATGCCATGATTTGATAATGTGGTGCTACAGTAAACATTTGCTAATGACGAATTAATTAGGCTTAAAAAATTTGTCTCGCAGTTTTCTAACGGAATCGGTAATTTGTTTTGTTATTAGACGATGTTTAATACTTTAAATGTGTTTCCGTATATCCGATGTGACACTCGAAAACAAAAAAGAAATTTGCCATCTAAACCGGGCCTAAGCGGATTGTTGGTGTGGATTATTTATTTGATTAATTATATGCATAATAAGTTACATGTCTTACTAAAAATAAACTTAACAAATTAATAAAAACAAGTGATCTAAGCAATGTTATTGAAAGCTTTTTGCGAAAATGTACTTTTCTCAAAGAATAGAACAAATAACTTTTCATATAATAATCCAGTGAATATTCTGAAAAAAATATAGGCACTTAGCAACACAATTTTAACTATTTCCTTTTGTCATACAGAAATTCTAGTCAGGATACAGTTTTCAATTATACAGTCATCATGTGATGTGGACACATGGAAATGATGGAATAACGCTTCTTTTAATTAAAAAATAAATTATATCATGATATATACTGGATTATTACTGACCAAATTAAGTTAATATTTTAAAAATAGATAAATATATAGATCTTACTCATGTTTGTCTTGAAAAGTCACACACTCTTTATCTTTTTGAGTAAATTAATTGATGAAGAACTGACCAGAATGCGGAGAGATCTTCTGATTACGTTGGCACGTAGCACACGCATTTTAATTTACTGTTATTGCTTTGAATTTATATAGATAGTCATATGATGCGGAGACGTACGTACGCCAAGGTGATGGTAGAACGCTGTGTTTTTAATAATAAATAAATCATATCATGATAGTTGCTGACTAAATAGCTCATGGAGAAATGGAAAGATATTAATTTTGACCGAAGTTAATAAATAAAATATAGATATTATAGGCCGCAAATAAAATAAAATTTTAAAACCTTAGTTTTAAACCGTCTGCTCCTTTTTATTTATCGTTTTATACTTTTTTTACCTTGGATTTTAAACTACTAAGAGAATCATACCCTATTACTATTTTCGGAAATTCCCACAATTTCAGAGAGCACCCGAGACTATATAATACCTGCTTGTATTGAAGGAGAATGGATGACATGTCCATGGATGTGTTTCTAAACTGCAGTCTATGGATGTGTTTCGAATCAGTCCAAGATTATGGAATAGGTTAATTTTGTCAATAGTCTATGTTTAATACTTCTAATTAGTGTCCATGTGACGGGGACTTACAAACTTTTAGTCCCATCCAACACCCCCCCCCCCAAACGTTTGCTTGGCCATAGAATTGAAAGTTCATTACTGAAAAAACGGCCAGTAAGTATTTTTAGCAAAACCGTTTATTAATAGATATGGATAGAAAGATTGTACTCCTGTTGGTGTTGAGAAGTCACACACTCTTTATCTTTTTGACTCAACTGAAGAGCTGACCCGATGGGAAAAATTCAACAAAAATAAACCATACTTTCCATACCAATTCCAACTTCGAAGATAAGTATTAATTCAGCACTCACCAAGCCTACATTTCTGACTTTTATATACATGCAGATGGGTGAGCTGAAGAAGCTGGTTGAAGAAGGCAAGATCAAATACATTGGATTATCTGAGGCCTCTGCGTCGACGATAAGGAGGGCTCACGTGGTTCATCCGATCACCGCAGTTCAGATCGAGTGGTCACTGTGGTCAAGGGATGTCGAAGAAGACATTGTTCCAACTTGCAGGTAAATATATTATATATGTAAGAATCATGGAGCAGTACTACTACTACTATTATTATTTTCTAGAAAACCGGGAATATTTCGGTCTGCAGGGATTGCAATTTCGATCTGAAATTTTGGAAATTTTGCCCCTCTCTAGCACGCAAATATCTAGCCCGAAATTCTTGGCATTTTTCTTTTTTTTATTTAGTTAAAAATTATTCAAATTCAATCAAAATTTGTTAAATTTTTTCAAATAATTTCGTGCCAAAAAGTTCGGAAATTCCCACAATTTCAGAGAGCACCCCACACCATATAATACCTGCTTGTATTGAAGCAGAACATGTCTATGGATGTGTTTCTAAACTGCATTATTTCTTCTTGTTCCGAAAATTTCAGAGAACTTGGCATTGGAATTGTGGCGTACAGCCCGCTAGGGAGAGGGTTCTTCTCCAGTGGAGCTAAACTGGTCGATGAACTTCCTGACGACGATTTCCGCAAGGTGATTATACTGCCCATGAGATCAACCACGACAGCCATCAACAATTAATTACGATCTAAATAAAATCTTAAATATCGATTCTTTGTTTGTCCAATCAATACATAGATCGACATTGATCCGTGCCTGTTTTTCACAAATATAATATGCATTTTCCACTCTTCTCTTCAGAGCCTACCTAGATTCCAGCCAGAGAACCTCGAGAAGAACGCGGCGATATTCGAGAAGGTTAATGCCATGGCAGCGAGAAAGGGATGCACATCGTCGCAGCTCGCACTGGCCTGGGTTCATCACCAAGGGAGCGATGTCTGTCCCATACCAGGAACCACAAAGATCCACAACTTCGACCAGAATGTGGGAGCACTGTCAGTGAAGCTCACACCTGACGAGATGTCTGAACTTGAGTCGTATGCTTCAGCTGACGTTGTGCAAGGTGACAGGTATCATGGTACTTTTCTGAACACCTGGAAGAACTCTGAAACTCCTCCGCTGTCATCGTGGAGATCAGGCAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016147