BGIOSGA016155

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Revision as of 04:25, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016155| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016155, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA016155

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016155, complete gene.

LocusTag

OSJNBB0085H11.9

Ensembl Transcript ID

BGIOSGA016155-TA

Ensembl Protein ID

BGIOSGA016155-PA

Length

4643

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:13826606..13831248

Sequence Coding Region

13826606..13826704,13828091..13828349,13828838..13829216,13829453..13829671,13829769..13829904
,13830427..13830672,13830958..13831248

Genome Context

<gbrowseImage1> name=IndicaChromosome04:13826606..13831248 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:13826606..13831248 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCCCACGACGCTATTGCTCCTGAGAAGACGACCAACTATGAGCCCTCAGTCTGGGGGGATTTCTTTATCAACTATAGACCACAACCGCTCCAGAGATCAGAGGAATGGATGAGGCAGAGAGCCAAGAGGCTCAAGATGAATGTCCGCACACTATTCTGGACTTCCAATGATGTGGTTGTAAGGATGAACTTAGTGGATGCAGTCCAACGTCTAGGAATTGGTCACCTCTTCAAAGATGAGATAAGGCGCACACTAAATGATATACACCAAAGTGAATTTACTAGCTCTAGCCTCCATGAGGTTGCTCTTCGGTTTCGCTTGCTTAGGGAGCACGGCTTATGGGTATCTCCAGTTACATTCAACAAATTCAAAGGTGACGATGGGAGGTTCATGAATGGAATAGCTGATGAACCAAGGGGTTTATTAAGTTTATACAATGCAGCTTACCTCCTTGTTCATGATGAGCCAGAACTCGAAGAGGCAATCTCTTTTTCTAGGTACCATCTAAAATCAATGATGCAGGGCAATAACCTCAAACACCCTTTATCTGACCAAGTCAAGCGTGCCCTTAACACACCATTACCAAGGACATCCAAAAGAACAGAGACATTGCATTATCTTTCGGAGTATGGACAAGAGGAAGGGCATATGTCAATTCTTTTGGATCTTGCAAAGGTGGAATTTAACCTTCTGCAGGGGGTCCACTTGAAGGAGCTCAAAGCTATTTCTGAGTGGTGGAGAGACCTTAATGAACATGTGGAGCTAAGTTATCTTAGGGATCGTGTGGTGGAGAGCTATACATGTTCACACATGTTGTTCTATGAAGAAGGCTTAGCATTCACACGGATAACTTTTACCAAGATAATTGTACTAATTATTATGATGGATGATACATATGATTCCCATGCTACCATCCAGGAATGCAGGAAGCTAAATGAAGCCATACAAAGATGGAATGAGAGTGCCGTCTCTGTCCTACCAGAGTACCTAAAAAATTTTTACCATAAATTGTTGAATAATTTTAAGGAGTTTGAGAATCAAGTGGTGGTTAGTGAGAAGTACCGGGTTGCTCATGCTAAAAAAGAGTTTCAAATACTGTCCCATTATTTTCTCCAGGAAGCTGAATGGTCACATAATAATTACAAGCCAAGTTTTGAAGAGCAGTTGGCTTTATCTACAAAGACTTCAACGGTGCAACTATTATGTGTGTCTACTACGGTCGGCCGGGGTGATGCAATAACAAATGAAGCATTCATGTGGGCAGCTAGCAGTACTACCGTGACATCATGTGCAAAGATAATGCGTTTCATGAATGACATTGCTTCATTTGAGCGTGGGAAGAACAAAGGGGAAATTGCGAGCACCGTTGAGTGCTACATGAATGAGCACAACATCATAAGTGAGGTGGCCTTTGCCAAACTCGATTCACTGGTAGAAGATGAATGGAGAACCATCAACCAAGCCCGTTGTGAACATCATCAGCTACTCCCGGTAGTGCAACGAGTTGTGAACTTGGCTATTTGTATAATGTTCTTTTATGACAAGAGAAAGGATGCGTACACATTCTCCACACATCTACAAGAGATTGTTAGGAATCTTTTCATCAATCCCATTACCATGTAG</cdnaseq>

Protein Sequence

<aaseq>MASHDAIAPEKTTNYEPSVWGDFFINYRPQPLQRSEEWMRQRAKRLKMNVRTLFWTSNDVVVRMNLVDAVQRLGIGHLFKDEIRRTLNDIHQSEFTSSSLHEVALRFRLLREHGLWVSPVTFNKFKGDDGRFMNGIADEPRGLLSLYNAAYLLVHDEPELEEAISFSRYHLKSMMQGNNLKHPLSDQVKRALNTPLPRTSKRTETLHYLSEYGQEEGHMSILLDLAKVEFNLLQGVHLKELKAISEWWRDLNEHVELSYLRDRVVESYTCSHMLFYEEGLAFTRITFTKIIVLIIMMDDTYDSHATIQECRKLNEAIQRWNESAVSVLPEYLKNFYHKLLNNFKEFENQVVVSEKYRVAHAKKEFQILSHYFLQEAEWSHNNYKPSFEEQLALSTKTSTVQLLCVSTTVGRGDAITNEAFMWAASSTTVTSCAKIMRFMNDIASFERGKNKGEIASTVECYMNEHNIISEVAFAKLDSLVEDEWRTINQARCEHHQLLPVVQRVVNLAICIMFFYDKRKDAYTFSTHLQEIVRNLFINPITM</aaseq>

Gene Sequence

<dnaseqindica>1..99#1486..1744#2233..2611#2848..3066#3164..3299#3822..4067#4353..4643#ATGGCTTCCCACGACGCTATTGCTCCTGAGAAGACGACCAACTATGAGCCCTCAGTCTGGGGGGATTTCTTTATCAACTATAGACCACAACCGCTCCAGGTATGGATGTGTATATATAAACATATATATATAGTTGTTATATATTAGTGCAACAGTTATACGTATATGCTAATTATATATTGTCTATGCATGCATGTACATGCAAATATTTTTATGCATATGTTCTGTTAATTAGTACTGGATCAATAGGAAACTTCATTAGTCAATACCGCAGCTCATGCATGTCTGACTCGAGATTTTAATTTTAATAATATCAATATCGGCCCATATGTGGATAGCGCCATATCGAGGCCATTTAGTGGAGTCCTAAGTTTGCCGCCATTATTTTATGGCAAATTTTGCTACATGACACTGCTATTTTGTGGTTTTAGCCTACACTGTCCAAACTCACTTTTGGGGAAAACACTCCATAAACGTGGTAATTTGCCAGTGGACACCGCGTCGATTAAAATAATAATTTTTGGTTGAAGAGAAAAGATATCACGTGAAATGTCAAAAATGCCCTTGGGCCCACATGCCAGCTCCTCCATCTCTATTCCACCACGAGCGCCGTTGTTCGCAGAGTGGAGCGCCGACAGCGCTGGGAGTCGTGCGGCAGCGGCAGTGGCGGAGTGTAGCACTGGGAGCGCTGGGAGTCGTGCAGCAACGGCTGTCCCGGTTGCGGCAGCGACGCCGACGATAACCACGACGACGCGCGGCGATGGCGGCTGCGGCAATTGCAGCGCGGCGGTGACTACGCCTTCGCCGCGTGGGGCGCCGGTGGCGGAGGGTGGGGACGACAACCAGAAGGCGGTGGCGGAGGGTGAGGACGACAACGAGGAGGCCATGGCAGACGGCCCCAAGATCAAGATCCTGGCGCGCGGTGGCGGCAGTGGTGGCGGCGGCGGTGGCAGTGGTGGCGGTGGCGGTGGCGCTTAGTGGTGGCGGCAGTTGCGGCAGCTTTGACGGTGCCGGTGGCGAGGCGGTGGCGCTGCGTGCAGGTCATGGTCGCCGTTGGCCATGGCGGCTGCGTCGGCATGGTGACGGCGAATGCAGTGGCGACGACGATGACGACGGCACGAAGACGGACGGTGGTGGCGGCCGGCCGGAGGAGATCGAGAGAGATTGGATAGGGAGGAGAGGTCACGATGGGGATCGGCTGGAGATGGAAGAGATGGCATGTGGGCCCAAGGGGTATTTTTGACATTTCACACGATTTCTCTCCCCACTTCAACCAAAAATTATTATTTTAATCGACGTGGTGTCCACTTGCAAATTACTACATTTATGGAGTGGTTTCCCCCAAAAGTGAGTTTGGGTAGTGTCTTAGGGCTAAACCACACAATAGCAGTGTTCTGTAGCAAAATTTGCCTTATTTTATACTGCTTATGTGCATGCGCACTATACTTTTGCTGGTTTTATCAATCCAAACCATGAATGCTGCAGAGATCAGAGGAATGGATGAGGCAGAGAGCCAAGAGGCTCAAGATGAATGTCCGCACACTATTCTGGACTTCCAATGATGTGGTTGTAAGGATGAACTTAGTGGATGCAGTCCAACGTCTAGGAATTGGTCACCTCTTCAAAGATGAGATAAGGCGCACACTAAATGATATACACCAAAGTGAATTTACTAGCTCTAGCCTCCATGAGGTTGCTCTTCGGTTTCGCTTGCTTAGGGAGCACGGCTTATGGGTATCTCCAGGTATCTATTGTTCTATAGAGTGGACTTAAACTAATGTTGATATAGCTTATTACTTTTTATGCTCATTATCCATTTGGTAATGAAATTTGAATTGCATTTAATAATTGTTGGTCGGAAAATTCTATACAGCTTTAGAGACAAACTTTATTTTTTAACTATACATTAATAGTGATAACACATGTAGAATCTTTAAGTTTCTCCACGTTTGATTTTTCTATTGTCAACGAAAAAATCATAATAGGTTAAAGCTAAGGCTGTGTTTAGATCCAAAGTTTGGATCCAAACTTCAGTACTTTTCCATCACATCAACCTGTCATACACACACAACTTTTCAGTCACATCATCTCTAATTTCAACCAAAATCCAAACTTTGCGCTGGACTAAACACAGCCTAAGAAAGAAATTTTGGTTCTTCTCTGTACAAGAGAAGGCTAGTCACAGACACATCTCAAACTAATTAGTTACAAATTAAATATTTTGTCTTGCAGTTACATTCAACAAATTCAAAGGTGACGATGGGAGGTTCATGAATGGAATAGCTGATGAACCAAGGGGTTTATTAAGTTTATACAATGCAGCTTACCTCCTTGTTCATGATGAGCCAGAACTCGAAGAGGCAATCTCTTTTTCTAGGTACCATCTAAAATCAATGATGCAGGGCAATAACCTCAAACACCCTTTATCTGACCAAGTCAAGCGTGCCCTTAACACACCATTACCAAGGACATCCAAAAGAACAGAGACATTGCATTATCTTTCGGAGTATGGACAAGAGGAAGGGCATATGTCAATTCTTTTGGATCTTGCAAAGGTGGAATTTAACCTTCTGCAGGGGGTCCACTTGAAGGAGCTCAAAGCTATTTCTGAGTACGTGTGCCTCTTTGATATATACCAAACTAACAACAAAAGTACTACAACAGTATATATTCATATCAATCTTAATACAGCTTCATACACTCATACATATATATGTAAATGATGTACTAAACAAACATGTCTGATAAATGTACAATATCCGGAAGAGCTCTTTGCAATATTAATTAGTACCAGTAATAATCTTAAATATACTATCTAAGCATGCACCTAAAATGCTTTTATTTTAGGTGGTGGAGAGACCTTAATGAACATGTGGAGCTAAGTTATCTTAGGGATCGTGTGGTGGAGAGCTATACATGTTCACACATGTTGTTCTATGAAGAAGGCTTAGCATTCACACGGATAACTTTTACCAAGATAATTGTACTAATTATTATGATGGATGATACATATGATTCCCATGCTACCATCCAGGAATGCAGGAAGCTAAATGAAGCCATACAAAGGTTTTGTCTTTGTCTTAGTGTATGCTGACATAAACTAATTTATATATACTTGCCTGACTAATTCCGATGTAAAGTTAACAATTTGCCTGCCTTGCAGATGGAATGAGAGTGCCGTCTCTGTCCTACCAGAGTACCTAAAAAATTTTTACCATAAATTGTTGAATAATTTTAAGGAGTTTGAGAATCAAGTGGTGGTTAGTGAGAAGTACCGGGTTGCTCATGCTAAAAAAGAGGTACAACAGCGATATAACTATGTTGGGACTGATTCCTTATTTGTTTATTTGATTTTCAGCCAACTTAGGTTTTCAAATTTGACTATTATGTTTCATAAATTTCCATCAATATGTGATGATAAAATTGTCATGACTTTCACAGCAACAAATATGATGGCATAATTTTCATACTAGACTTTTTTTTCAGTAATGATCAACATTAGTTGACAACATGAATTCTATGAAGTCAAGTAAAAAAATAGAGGTGGAAAGCATCAGTGGTGTTGTGGTGAAGTTTTGGTTGCATCATTCCACCCACCAGATTGATGGCTCAACTCTTCATACCAATGAATATTATGCAAAAGCGGGTGCTCTTTTCAAAAGAATTTTATGATGCTAGGGAGTGGTCACTGGTCTCGGTCTCTTTGAGTGCATGTTGGGTTGAATATTTGCGGGTGTGTGAGTGTGGTTTGGAAAATCAAAGCAACAATATTACCATGTTTTGTTAACCTTTTGTTATGAATTTCTTTTTCTTGGGCACAGTTTCAAATACTGTCCCATTATTTTCTCCAGGAAGCTGAATGGTCACATAATAATTACAAGCCAAGTTTTGAAGAGCAGTTGGCTTTATCTACAAAGACTTCAACGGTGCAACTATTATGTGTGTCTACTACGGTCGGCCGGGGTGATGCAATAACAAATGAAGCATTCATGTGGGCAGCTAGCAGTACTACCGTGACATCATGTGCAAAGATAATGCGTTTCATGAATGACATTGCTTCATTTGAGGTACAATTTAATTAATTTAACTTGTTCTTATTAAATGTAATTTTTCAATGCCCAGAACAACATTGTTCCTGAGTGGCCACAGTATTTGTTCAAGCTCATCATTATAGAGAAACGGTAAATTTTCACACAAGTAAAAGAAAAACATGGTGCTCAACATATGACTATATGCTACTATCCATGATTCCCTTAACAACTACTCTATAACAATGTACTTTATAACTTTTTACATTGTTAAATTATGGGTGGAAGGTGAGAAATTATAATTTATCTTTGACATTCATACAGCGTGGGAAGAACAAAGGGGAAATTGCGAGCACCGTTGAGTGCTACATGAATGAGCACAACATCATAAGTGAGGTGGCCTTTGCCAAACTCGATTCACTGGTAGAAGATGAATGGAGAACCATCAACCAAGCCCGTTGTGAACATCATCAGCTACTCCCGGTAGTGCAACGAGTTGTGAACTTGGCTATTTGTATAATGTTCTTTTATGACAAGAGAAAGGATGCGTACACATTCTCCACACATCTACAAGAGATTGTTAGGAATCTTTTCATCAATCCCATTACCATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016155