BGIOSGA016163

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Revision as of 04:25, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016163| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016163, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016163

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016163, complete gene.

LocusTag

OSJNBA0020I02.11

Ensembl Transcript ID

BGIOSGA016163-TA

Ensembl Protein ID

BGIOSGA016163-PA

Length

2975

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14012272..14015246

Sequence Coding Region

14012272..14013090,14014261..14014351,14014439..14014494,14014995..14015043,14015164..14015246

Genome Context

<gbrowseImage1> name=IndicaChromosome04:14012272..14015246 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:14012272..14015246 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAAACATTGTTAACACTGTAAACAAGTTCTCGGGCAACAATGCTGATGGTGTTCCCTTCCGGAGGTGCTCTTACTTGCCAAATAGTACTTGTGACGAGAATGGTAGTTCAGTGACCAGAAAATCTGCTTCTGCTACAAATGGCAGTATTAATGGACATGGTACCTTGTATAAGGATGTGGGTAATGAGGAAATGCACTTGGCTACAGACAGTACTTCTAAACCAGGGTGTCGTGGTGATACTAATCACTGTACTAACAAAGAAAGAGAAACTCGGAATGTAATTGTCCACACCGACTCAAGACAAAATGGGGATGCTACTAATTCTGACAATGCTGTTTTAATTTGCAATCAGACGGCTGGTCATATGTCCTATGGTTTGGATGGGGAAAGTAATAGAAGTTCTGGAAGCTTAGCGGCTGTGGTTTCTGAAGTTCTTGTTAGTAAAGCACCACTTGAAAAGAGATGTCGTACTAACCTTCAGGAAACTGGAGATTTGGAAAATACTCCAAATGCACATGTGAGCAAAAGGTCGAGACTGCACAGGGTTTCTCCTGCAAACAGTCTGTTTGATCGTGAGGCTTGTGATGACTTAATTGATAGTGCTCATAATTTAGATTGTAGTCGCACTCCTAATGCTTCAGTGCATGATGAAACGGTACCAAATGAAGATAAAACACCTTGTACTTCTTTAGATGTGAGAGGTTGTGAAGGTACCCCTAGAGCTTCCTTGAAGAGACGAGTGAACAAGAAAAGAACTAAACGGGAAGCATCATATCCAACGACACCACTAAATGGAAATACCGGAGCTTTAGTTGTGATTGAACCTCCCCTGACTCGTACTAAGGCTAAGGGTAAGGCTTTATCTCTTGCTACACCTGAATCTCTCAAGAGAAGCACTAGATCAGGTCGACTGATAGTTCCACGGTTGGATCCAGGAAGCCAGAAGATTATATATGACATGGACGGTTCTATCCTTGCCATAACCAACTTAGAGTCACCCCGGCTTCAAGGGCCTTATTCGGAGCCGCCTCCTAAGAGGAGGAAAACGCCTCGGTGTTCGTCCCCAGGACACAGAAGATTGCTGCCATTCTAA</cdnaseq>

Protein Sequence

<aaseq>MGNIVNTVNKFSGNNADGVPFRRCSYLPNSTCDENGSSVTRKSASATNGSINGHGTLYKDVGNEEMHLATDSTSKPGCRGDTNHCTNKERETRNVIVHTDSRQNGDATNSDNAVLICNQTAGHMSYGLDGESNRSSGSLAAVVSEVLVSKAPLEKRCRTNLQETGDLENTPNAHVSKRSRLHRVSPANSLFDREACDDLIDSAHNLDCSRTPNASVHDETVPNEDKTPCTSLDVRGCEGTPRASLKRRVNKKRTKREASYPTTPLNGNTGALVVIEPPLTRTKAKGKALSLATPESLKRSTRSGRLIVPRLDPGSQKIIYDMDGSILAITNLESPRLQGPYSEPPPKRRKTPRCSSPGHRRLLPF</aaseq>

Gene Sequence

<dnaseqindica>1..819#1990..2080#2168..2223#2724..2772#2893..2975#ATGGGAAACATTGTTAACACTGTAAACAAGTTCTCGGGCAACAATGCTGATGGTGTTCCCTTCCGGAGGTGCTCTTACTTGCCAAATAGTACTTGTGACGAGAATGGTAGTTCAGTGACCAGAAAATCTGCTTCTGCTACAAATGGCAGTATTAATGGACATGGTACCTTGTATAAGGATGTGGGTAATGAGGAAATGCACTTGGCTACAGACAGTACTTCTAAACCAGGGTGTCGTGGTGATACTAATCACTGTACTAACAAAGAAAGAGAAACTCGGAATGTAATTGTCCACACCGACTCAAGACAAAATGGGGATGCTACTAATTCTGACAATGCTGTTTTAATTTGCAATCAGACGGCTGGTCATATGTCCTATGGTTTGGATGGGGAAAGTAATAGAAGTTCTGGAAGCTTAGCGGCTGTGGTTTCTGAAGTTCTTGTTAGTAAAGCACCACTTGAAAAGAGATGTCGTACTAACCTTCAGGAAACTGGAGATTTGGAAAATACTCCAAATGCACATGTGAGCAAAAGGTCGAGACTGCACAGGGTTTCTCCTGCAAACAGTCTGTTTGATCGTGAGGCTTGTGATGACTTAATTGATAGTGCTCATAATTTAGATTGTAGTCGCACTCCTAATGCTTCAGTGCATGATGAAACGGTACCAAATGAAGATAAAACACCTTGTACTTCTTTAGATGTGAGAGGTTGTGAAGGTACCCCTAGAGCTTCCTTGAAGAGACGAGTGAACAAGAAAAGAACTAAACGGGAAGCATCATATCCAACGACACCACTAAATGGAAATACCGGAGCTTTAGTTGTAAGTGTAATTTTATTTTCAGGGTACCTTACTTATTATGTTAAGGACTTAAAAGTGTTAACATGTCTACTGTTGTTGTTTACAAGTGATTTTTTTCTTCTACCATTGCTGAAACCTTTAATGGCTTTTTACCACTAAAACAAGGACCTTATCTCATTTTCTTTTCTTCTTTCCATATAAATACCAAGAAAATCACGGTTTTATTAATTGCTTCTCTAGAAATTTACGTAAAAGCAGGTTGCACATGTGTTTAAAGAGGCACACTCGTAGGTGTGTGCATGTTGTGTGTGTGTGTGTATCTTCCTTGTAATCACATAAGGTGGGTATATAGTTCTCAAGGGTGGCAAAAGAAATTACACAAACTAAGATATTTTAAAGCTTGAAACTGCATAGTGTGACCACATGTTACATGTTTAAACCAGTACTCTATGTATATTGTGGAAATAGCCTCCAATTCATATAGGTATTGCCCGCTCATATTGAATTTGTACAAAAAGTTCTTTTGAAATTCATGTGTTCCAAACTGCCAGCTATGGTAACTTATATGGTTTGGCATTCGCAGAGTATGTTTGAAGTTATTTAAGGCAAACTTTCTTACATTCGAAACTAACGTTTCACAAGGTTCAGTAAGAAGTTGTATTGGCTATGCAACTAATAGATAAAGCCCTAACCAAATGTTTTGATCATATTATTTGCATTATTAAACACATCCTTTGGTTTTCCGAAAGGCAAATGGTATTACTCTGGTTCCTAATTATAATGCCAAAGGCGTTATCAAGGGAGTAGGTAAGTACAAGTTGACACAACATGTTTGTTCTTTTAAGGAAATAGAGGTTGGGGGGGGGGGGGGGGGAGTAGGTGGAATGCTCACTCAAGCCATTTAAGGAAGGGGTTCACTCTGTGGTTCTGCAGAAACTTTGTTGCGATCATGCTGTTGTCATTGTAATAAATAGTCACCTGAATAAAAATCAGACATTCAAGCAATCAGCAAGTTGTGCAAATTCTGGTTTTATGTTTTTTTTGTTTTGACACTTTAGGCCTACGTATTGCCTGCAATGAAGTTGCGTATACATTATGAATCCATTTGTCTTTCAATGTATAGTCTCATTTGCATGTGAAATATGTATGCTTCTATTGAGAACTTATTTAATAGTTTGTTGAAATTTGAAGGTGATTGAACCTCCCCTGACTCGTACTAAGGCTAAGGGTAAGGCTTTATCTCTTGCTACACCTGAATCTCTCAAGAGAAGCACTAGATCAGGTGAAGTGTTTGGTCTTTGAATTTTGAATACCGCTTAACCATTTATTCATTTATTCATTTACCAAGAAATGTGTTTATTTTTTTCAGGTCGACTGATAGTTCCACGGTTGGATCCAGGAAGCCAGAAGATTATATATGACATGGTTAGTAATAATATAATTGTTCATTTTTCTTGAAAAGAAAACATAAGCATTCATTTCTGCTGTTACCATAATCAGAAGTTTATGTAGACTCGTGCTATGTAATGTTAAAGTTATCAACTAGCACAAGTATCATAATGTATGTGATCAGCTCTCAAAATTGAAAAATTGTGCTAGCACAAAAGCTGAAGGTTCACCAGGGATGCTGCATAACCTGATGGTTTGAATTGTTTTCACTTGGAACATTATTTCTGTGTACTTCATTGGAGCTGTTTTCACTTGAATTAAATTTACATGCCCATCAAATAGTTCAGCTGAAAATATAGGACTATGATATTAAAACTGCGGCTCATTATGTCTTCAAGAACTGTCATTAGCAGTGCTCACTATTTTCTTTCATTTCAGTGTTGAAACAGGTCTAGTGTATAACTAAAATTATGGGTGTGATAATGATATGCCTAGCAAGTGTATATATCTTACTGAATACACAGCTTTATTCACAGGACGGTTCTATCCTTGCCATAACCAACTTAGAGTCACCCCGGCTTCAAGGTTCGTTCAGAACTTCAGACATTTCACATCCAATTGTCATGCCCATACTTTTCCAGTTTCTTGTGCCTGATGATTTAAGCAAAACCTATTGTCAAGCTATGCCTTCTCGTCTTGCAACAGGGCCTTATTCGGAGCCGCCTCCTAAGAGGAGGAAAACGCCTCGGTGTTCGTCCCCAGGACACAGAAGATTGCTGCCATTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016163