BGIOSGA016180

From RiceWiki
Revision as of 04:25, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016180| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016180, complete gene.| tag = OsI_154...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016180

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016180, complete gene.

LocusTag

OsI_15479

Ensembl Transcript ID

BGIOSGA016180-TA

Ensembl Protein ID

BGIOSGA016180-PA

Length

712

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14396509..14397220

Sequence Coding Region

14396509..14396524,14396712..14396907,14397010..14397220

Genome Context

<gbrowseImage1> name=IndicaChromosome04:14396509..14397220 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:14396509..14397220 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCATCGAGAAATCTTATGTTGCTGGTGAGCAAGCAGGCTTGTTACTTGAGAAACCATTCCAAATTGGTGAAGCACTACGACAAGGTTACACCCTAGATGTTGAAGCTGAGGTGCAATTAGTAGACAGGATCAAGTCAAAACTCAGAATAAAATCTTCCATTCACAACAAGTTAGAAAAAACAACCATGAAGAAACTTGGGCTTAAAAGGGCTATGCACTTTGGTTGGCCAAATACATATGTGCTGACAAAAGCTATGGGGGAGATGTTACTTCGACAATTGGGAGGAGACCTTCCAGTTGTCATCGTCCGGCCAAGCATAATAACAAGCACTTTTCAGGATCCAATGCCTGGATGGATAGAAGAAACTAGGTGGATATATTCCAGTGTATTATACACCACAGCCTTGTTGCTACACTAA</cdnaseq>

Protein Sequence

<aaseq>MGIEKSYVAGEQAGLLLEKPFQIGEALRQGYTLDVEAEVQLVDRIKSKLRIKSSIHNKLEKTTMKKLGLKRAMHFGWPNTYVLTKAMGEMLLRQLGGDLPVVIVRPSIITSTFQDPMPGWIEETRWIYSSVLYTTALLLH</aaseq>

Gene Sequence

<dnaseqindica>1..16#204..399#502..712#ATGGGCATCGAGAAATGTAAATACTAATGAATCGCTTGTTTACGAAGAATGACTAGTAGCATGTTTAAATGGATGATAAGTAGAATTACTTATCCTTGGTCTATATGCCAAAATGAAATATGACTATCAAAAATAAATAGAGGGAGTACCATATTATGGAGGTTCTAATGAAAGAGGTGATATTATCAATTTGTTATGAACAGCTTATGTTGCTGGTGAGCAAGCAGGCTTGTTACTTGAGAAACCATTCCAAATTGGTGAAGCACTACGACAAGGTTACACCCTAGATGTTGAAGCTGAGGTGCAATTAGTAGACAGGATCAAGTCAAAACTCAGAATAAAATCTTCCATTCACAACAAGTTAGAAAAAACAACCATGAAGAAACTTGGGCTTAAAAGGTTTTATAGAAGAATCATATTTTTTATATATCTTGACGCCTTGAAATAATGTCATGTGCATGAATATTATAACATGATCTACTTGTGATGAATTTTTTGAAGGGCTATGCACTTTGGTTGGCCAAATACATATGTGCTGACAAAAGCTATGGGGGAGATGTTACTTCGACAATTGGGAGGAGACCTTCCAGTTGTCATCGTCCGGCCAAGCATAATAACAAGCACTTTTCAGGATCCAATGCCTGGATGGATAGAAGAAACTAGGTGGATATATTCCAGTGTATTATACACCACAGCCTTGTTGCTACACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016180