Os09g0407300

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Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0407300| Description = Conserved hypothetical protein| Version = NM_001069670.1 GI:115479082 GeneID:4347015| Length = 5541 bp| Definition ...")
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Gene Name

Os09g0407300

Description

Conserved hypothetical protein

Version

NM_001069670.1 GI:115479082 GeneID:4347015

Length

5541 bp

Definition

Oryza sativa Japonica Group Os09g0407300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15021799..15027339

Sequence Coding Region

15022099..15023453,15024493..15024569,15024966..15025087,15025200..15025286,15025362..15025428
,15025497..15025652,15027051..15027199

Expression

GEO Profiles:Os09g0407300

Genome Context

<gbrowseImage1> name=NC_008402:15021799..15027339 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15021799..15027339 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagggtggaggatccggacctggaggacccgaacccggacgtgggggagctgttcagccactacgacgggctctacttccgcggcgcgctcgccggcgccggcttctccgtccagtggagctcgccgccgtcgcggatggccggttcttttggatcgtgtaccttcggaaaaccggataataccataacattgtctgaaactgtgctgaaatatcgctcaagtattgatatgaagaatgcattgctgcatcagatgatccatgcaatcttatttgtaaagcatcataggaaggactgccggggtcatggtcctatttttcgtgcttggatgactgctattaacacctgttctattgacgatcaccagagaccacctgatgggtacaatatcaccaccagacatgatttttctccggacaagtccacccgcagcctaagtggttttttgtggaagtgtgaatattgtgggaatacacttgtgagagccacaaacatcggtgctccatctgatgcctgctgcattgagaatgttgacaactgctcaacctgtggcaacatgctttgccactggcataaccacaagatgaactgtggtggcacatacacaaagatgggcacatcaacatcggcagaagttcaaaacaatgttcaaggtacaaaaagatgcccaactgacatgaaaatggccaagtcacaaagaaccatacggaaaccagagtcaccagattcagatggattgcaggagaaagctactgtcatgaaacaaaaagcagaaggcgagcttctcgcacttgtggctggcagcaatttaaaattaacaggaagtaactcttcaaagaagggagtgaagaggcataggcctgaagacactcaagacacaaatgctatgctttctacccctctgaaaaacctgaagctgggcctagacttggtttcatctgggaagcacagggtgtcatctatagttggtagcaataacacaaaatcatcaagaggtagtgcttcaaggaagcaacgcaaacgacattcacctgagaatgttcagaagtccagtgttctgcctgctctctctcaaaagaagctgaaactgaaggaagacctggttgtatcagggaagaacgagcctttatccctagtgaatttcagcaatggaaaatcagcaggaagtaactcatcaaaaaaggtaagcaagcagcatgaacttgaaggagttcagaaatcctgtgttcagcctgctagccctccgagaaaaccgaggcaagatcttgttgcatcggtcaaaaccgagatttcttgtctagccagtcgcagcgatgctaaagtgttgagaggcagctcctcaaaatgtgcaggcaatcagcatgagcctgcagacattcagaaaagcatcgctctgccttctgcctctgaaagtaaactcaagcgacagaatgaaattagctcctcaactaaggcagggatgcaggacaagcctagaggcactcagaaaaccattgatctgcctgcttcccctcaaacaaaactgaagcaatcagtgttgcagaagcaaaagagacagtgcggaactaggaagtcagctaatgagcaatttgccgtgattagtgcttggctgaactactacgagtcagaaggatcaagtggatcaactgagccccttgtaaacaaaagaacagagcggagaaggatagcgaggaataggataacttatacacggtcaaggaagcaaaatgccaggggaaatgcttccatcaagtcccaaccttctgaagatgactcgtctcaagcaaaagctgcagctccatgcttggagattgttgttagcaccccttctgagcaggtggtaaatcaatcccccggatgccagtcccagtcaccagctccatacttggcgatcgttcctttcgacgctgctcatgatatggttccacttcagtcagcagatccacccggtttaactgatgatccaaccattacttctggcataattgatatttcagatgatgactga</cdnaseq>

Protein Sequence

<aaseq>MERVEDPDLEDPNPDVGELFSHYDGLYFRGALAGAGFSVQWSSP PSRMAGSFGSCTFGKPDNTITLSETVLKYRSSIDMKNALLHQMIHAILFVKHHRKDCR GHGPIFRAWMTAINTCSIDDHQRPPDGYNITTRHDFSPDKSTRSLSGFLWKCEYCGNT LVRATNIGAPSDACCIENVDNCSTCGNMLCHWHNHKMNCGGTYTKMGTSTSAEVQNNV QGTKRCPTDMKMAKSQRTIRKPESPDSDGLQEKATVMKQKAEGELLALVAGSNLKLTG SNSSKKGVKRHRPEDTQDTNAMLSTPLKNLKLGLDLVSSGKHRVSSIVGSNNTKSSRG SASRKQRKRHSPENVQKSSVLPALSQKKLKLKEDLVVSGKNEPLSLVNFSNGKSAGSN SSKKVSKQHELEGVQKSCVQPASPPRKPRQDLVASVKTEISCLASRSDAKVLRGSSSK CAGNQHEPADIQKSIALPSASESKLKRQNEISSSTKAGMQDKPRGTQKTIDLPASPQT KLKQSVLQKQKRQCGTRKSANEQFAVISAWLNYYESEGSSGSTEPLVNKRTERRRIAR NRITYTRSRKQNARGNASIKSQPSEDDSSQAKAAAPCLEIVVSTPSEQVVNQSPGCQS QSPAPYLAIVPFDAAHDMVPLQSADPPGLTDDPTITSGIIDISDDD</aaseq>

Gene Sequence

<dnaseqindica>3887..5241#2771..2847#2253..2374#2054..2140#1912..1978#1688..1843#141..289#gcttcctcactaccaccttctcgttgatcctcctccccgttcttggctcccctcgcattcgtcctcacttcccttcttccatgggggttcgccgccgtgagtgaggaggaggaggagtagtactaggaggaggtgaggccatggagagggtggaggatccggacctggaggacccgaacccggacgtgggggagctgttcagccactacgacgggctctacttccgcggcgcgctcgccggcgccggcttctccgtccagtggagctcgccgccgtcgcggatggccgggtagggtcccttgctcagctcactggccctctcaatctcttgctgagggtttcttggaggagctgcattcttttctggtctttttttcttcttttttaatatatccagaaaatttgcagttcatgggaggagttagtagcatctcggtgtgatgctgtgggagaaatctttgtagcacacttggggtgttttgctttctctgtgattctctgcacttgctgctgctgctgctgctgctgctttgattttttttgttcgaatccctagcaagagacggattgatcatctcttctttttccgggcgatttcagagggagggagggtttggttttcttggtttgttagttctccatccttcaatcgacaagcttcagggtgttggtgatctttcacgaaaggtttcgtctttttagaaaaaaacgcgaatattagggaagtagctaatatcaaatactaattattagaaggggtggcttcgaacccaggtcccactaccttgtcgagctaatatcaaatgctaattattagaaggggtggggcttcgaaccaaggtcgtctagcccagtaccttctcgagctaccggaagacctcaatttcgtctttttagcatttggcacttgaagtgacataaatggcgccgcttttgtgcacttcttgctgagaagagcttcttgtctacaagtagatcatgcatattgtagtttgcatcgatatagattctttttttttagattggcactttggggggttagtactcaacggaaaccagtaatcgccggtagaaaaaaaatgttttgggatgaaagagaagtacataatctgtgaccaagttcattcataactgtctcttgttagtgtgcgggtttgcttaatgagatttgtgcatgatttctagtagtacctacttttggatcacttagacggatagtaaagactaaaaacctttaaaaattaaatcattagcagttcattatactcggtgaagtaggctgcattcattgggtagacaataagaagtttggtgatgcttctagcattctgcttaatctgatggttggccgggttgggtaatgggttatgcatgtacagtacagaataggttggggagatcatcagccagtgacgtggatgaaacagcatgtatctaaaagtttgtgtcagatagcatttccccatgattgatggcttcagttaagcaaatcctcctatcttcttgagaatacagaacatgcttcactatcacatcagataaactttagcaagagaggaaaaaaaatgttgattttgggattaaagatgcttgttagtatataactattttgttcaataaatagctgccctctgtaaagatttataggtacatcttggggaaataactagtttgtttgtctatgcagttcttttggatcgtgtaccttcggaaaaccggataataccataacattgtctgaaactgtgctgaaatatcgctcaagtattgatatgaagaatgcattgctgcatcagatgatccatgcaatcttatttgtaaagcatcataggaaggactgccggtaaatgtttgcttgtgttagctaataaatcttgttactctctgcttaatttcagtgaattcatgcaggggtcatggtcctatttttcgtgcttggatgactgctattaacacctgttctattgacgatcaccaggtcagtcttttctgtaagataagctatagtttgctgcgcttcattgatgatttctgaattcctttttttcctcagagaccacctgatgggtacaatatcaccaccagacatgatttttctccggacaagtccacccgcagcctaagtggttttttgtggaaggtaattctgaacttctgtcacctcctttcatttttttctccctttttggtgctaactttctttttaacctttcaattatcataatctgttgtgttcaattacaacctttcagtgtgaatattgtgggaatacacttgtgagagccacaaacatcggtgctccatctgatgcctgctgcattgagaatgttgacaactgctcaacctgtggcaacatgctttgccactggcataagtaagactcaatagttttagaatatagaatagtaccaaaacaatgcacagacaaaagtatgagctcaatctatttgagtctcgtttgaaaaatatatgtgcactgttcattcttcgttttgttctctcttaagaaatcacaagtgaaaagcagatcaataaaactggggaaactggatgcatatttgattttggaaatttcaactcaaaactgatcactaaatgcacatacctgatgcgtgttattgtgaatatatcaaaatcatctatgtttgagcattctaaatataacaaatcatctatgcttgagcattctaaataacttttattttcagcaaatgtttgcagcagttgattgcaaagatctgttattgactcaatatgctattttctgcagccacaagatgaactgtggtggcacatacacaaagatgggcacatcaacatcggcagaagttcaaaacaatgttcaaggtaattttcaaatttacatggtatctccttctgtttatcagcagtgaactaaccgttgaagagtatggaagccaagatcagctcctgtgcttcatatatttctctcttttctaccccattcgtttcatattttttttgaaaggacccattcatttcatattataagtcgttttgagtttgaccaagtttataaaaaaaatatagtagcatttctaatacaaaacaaacattgtatcaaaatatattcaatgctaaatttaataaaactaatttggtgttttatatattgctaattttttctataattttggtcaaacctaaaaaactttgatcaagaaaaaagtcaaacgacttataatatgaaacggagggggtaatagtttatccacccaaaccagttacgctcaattcaactacaaaattatgtgttttggaacaaaaatcagatagtcctgtttatattgaaagccacagcatttatacagtgatacagaggataccagtgtccaaagtactaccataatagaaataagcaaaatgacatgtaggttcgcagttttctattacactttattttcccaatccactccacttgtcttgactcttgaactgaaactttgttggttaaaaatcttggcatcaagaagcttgatcttcatttcaagtctgcctgcatcatttgatcactcaaacaatcgccgattatgtagcaagtagcaatagaaggcttcaataaacccacggtgatggaaataactagtagcgaagttgtgcaacaataattatttctacatgaggaactcgggtttggccctttccctgcacaacatagtagatcataataatgccttgccacagttgaattgattattttaggcttgtcattctgcgaattgtggtaatcccaccatttatgtaatgtggcattccccaattagaatgtagactttaaaatgatatcaaaatatcagttttgttatacctatctcttttgttcttatcattaaagtacatgttaccaaccttatagtttctccaggtacaaaaagatgcccaactgacatgaaaatggccaagtcacaaagaaccatacggaaaccagagtcaccagattcagatggattgcaggagaaagctactgtcatgaaacaaaaagcagaaggcgagcttctcgcacttgtggctggcagcaatttaaaattaacaggaagtaactcttcaaagaagggagtgaagaggcataggcctgaagacactcaagacacaaatgctatgctttctacccctctgaaaaacctgaagctgggcctagacttggtttcatctgggaagcacagggtgtcatctatagttggtagcaataacacaaaatcatcaagaggtagtgcttcaaggaagcaacgcaaacgacattcacctgagaatgttcagaagtccagtgttctgcctgctctctctcaaaagaagctgaaactgaaggaagacctggttgtatcagggaagaacgagcctttatccctagtgaatttcagcaatggaaaatcagcaggaagtaactcatcaaaaaaggtaagcaagcagcatgaacttgaaggagttcagaaatcctgtgttcagcctgctagccctccgagaaaaccgaggcaagatcttgttgcatcggtcaaaaccgagatttcttgtctagccagtcgcagcgatgctaaagtgttgagaggcagctcctcaaaatgtgcaggcaatcagcatgagcctgcagacattcagaaaagcatcgctctgccttctgcctctgaaagtaaactcaagcgacagaatgaaattagctcctcaactaaggcagggatgcaggacaagcctagaggcactcagaaaaccattgatctgcctgcttcccctcaaacaaaactgaagcaatcagtgttgcagaagcaaaagagacagtgcggaactaggaagtcagctaatgagcaatttgccgtgattagtgcttggctgaactactacgagtcagaaggatcaagtggatcaactgagccccttgtaaacaaaagaacagagcggagaaggatagcgaggaataggataacttatacacggtcaaggaagcaaaatgccaggggaaatgcttccatcaagtcccaaccttctgaagatgactcgtctcaagcaaaagctgcagctccatgcttggagattgttgttagcaccccttctgagcaggtggtaaatcaatcccccggatgccagtcccagtcaccagctccatacttggcgatcgttcctttcgacgctgctcatgatatggttccacttcagtcagcagatccacccggtttaactgatgatccaaccattacttctggcataattgatatttcagatgatgactgattttattttcgaattggcattgatcctgcaacaggcaatgctttcgatggatgaacaacatactggatgctaacaaactattggtgttaggctcgcatcattttggaaattgacattgtttttgcatagtgcctaatatagaacagtagctgcttatgagcataggattgcaaattttgcaactcatgttcgaaccacagtagcataaattcttatagtcccagcaggatctcagaagtagactcttatatcttgggcacaaacctctgaattatgatatgtaaaatgcaatttcaatat</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0407300, RefSeq:Os09g0407300